D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major
D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences
J. Mol. Biol., 435 (2023)

Hammerhead ribozyme HH10   (Rfam: RF02277)

Seed sequences
All NCMs (CSV file) (all) positive sequences (all) negative sequences (random) (training) positive sequences (training) negative sequences (testing) positive sequences (testing) negative sequences 

Options
Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN
Rfam
D-ORB
Augmented
(()(U)C)C
(.ARYAA.)
U(RC(C))
U(U(G))
(.RAA.())
((G)U)G
A(YRN)U
(.G.().R.)
100.0
100.0
100.0
100.0
100.0
100.0
83.3
100.0
U(U(G))
(.RAA.())
A(YRN)U

% of positive sequence with ORB





Deep neural network:

5-fold cross-validation: 99.9 %
(± 0.119 %)
Decision tree:

5-fold cross-validation: 90.8 %
(± 13 %)
D-ORB structure
D-ORB structure decision tree:

5-fold cross-validation: 97.5 %
(± 5.01 %)
of ABRO01075407.1/4297-4173
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
((....((((((((.((((((((..((((((....(.(((((......))))).)((((((((((((.(.((((((...))))))))))))))))))).))))))))))).)))))))))))).)
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345

abstract shape: (()())

Number of sequences
Structure ORBs (out of 18) (%)
1 (()(U)C)C
 16 88.9
>AAPE02016436.1/88673-88548
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUUCACUGAAACAAUUUAGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAAACA
..............................(....(..................)(..........................................).).........................
>AANN01835346.1/6695-6820
UAUAAAAAGUUUCUGGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCGCUGAAACAAUCUUAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAGCAGAAA
..............................(....(..................)(..........................................).).........................
>ABDC01016136.1/1645-1521
AAAAAAUUGUUUCUUGACAAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(.........................................).).........................
>AACN010833217.1/254-131
AGAUAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAAUUCUCACUUUACUGAAACAGUAUUGAAGUGUGAAUUGGUCCUGUAGUACUGUCAGAAACAACUC
..............................(....(..................)(..........................................).).......................
>ABRR01225530.1/1389-1264
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCGAUUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAAAAGAAA
..............................(....(..................)(..........................................).).........................
>ABVD01205953.1/236-113
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUCAGAGCGAAACCAGUUCUCACUCCACAGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUCAGAAACAACUC
..............................(....(..................)(..........................................).).......................
>AC022023.7/76347-76471
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(.........................................).).........................
>DAAA02059264.1/10059-10184
UGAAGAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCUGCUGAAACAGUUUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(..........................................).).........................
>AACZ03072024.1/84930-85054
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(.........................................).).........................
>AAWR02007510.1/95228-95353
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAGUUUUGGAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(..........................................).).........................
>ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
..............................(....(..................)(.........................................).).........................
>ABRT010035571.1/1210-1086
UAAAAAUUGUUUCUUGACCGGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCGCUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(.........................................).).........................
>AAGU03026496.1/1499-1624
AGGCUAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACGGAUGCACUUUUGAAGUGUGGCUUGGUCCUGUAGUACUGUGUCAGAAACAACUG
..............................(....(..................)(..........................................).).........................
>AAPY01660575.1/1490-1366
UAAAAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUCUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
..............................(....(..................)(.........................................).).........................
>ABRN01381274.1/4843-4718
AAGUAAAUGUUUCUCGACCAGUUGCCUACAGCUGACGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCCACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(...(..................).(..........................................).).........................
>ABRP01180546.1/5965-5840
CAAGAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
..............................(....(..................)(..........................................).).........................
2 (()(U)C)C
(.ARYAA.)
 14 77.8
>ABDC01016136.1/1645-1521
AAAAAAUUGUUUCUUGACAAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(.....(......).....)(.........................................).).........................
>AC022023.7/76347-76471
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(.....(......).....)(.........................................).).........................
>AACN010833217.1/254-131
AGAUAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAAUUCUCACUUUACUGAAACAGUAUUGAAGUGUGAAUUGGUCCUGUAGUACUGUCAGAAACAACUC
..............................(....(.....(......).....)(..........................................).).......................
>AACZ03072024.1/84930-85054
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(.....(......).....)(.........................................).).........................
>AAPE02016436.1/88673-88548
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUUCACUGAAACAAUUUAGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAAACA
..............................(....(.....(......).....)(..........................................).).........................
>ABRP01180546.1/5965-5840
CAAGAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
..............................(....(.....(......).....)(..........................................).).........................
>AAGU03026496.1/1499-1624
AGGCUAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACGGAUGCACUUUUGAAGUGUGGCUUGGUCCUGUAGUACUGUGUCAGAAACAACUG
..............................(....(.....(......).....)(..........................................).).........................
>AAPY01660575.1/1490-1366
UAAAAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUCUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
..............................(....(.....(......).....)(.........................................).).........................
>ABRT010035571.1/1210-1086
UAAAAAUUGUUUCUUGACCGGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCGCUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(.....(......).....)(.........................................).).........................
>ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
..............................(....(.....(......).....)(.........................................).).........................
>AAWR02007510.1/95228-95353
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAGUUUUGGAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(.....(......).....)(..........................................).).........................
>DAAA02059264.1/10059-10184
UGAAGAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCUGCUGAAACAGUUUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(.....(......).....)(..........................................).).........................
>ABRR01225530.1/1389-1264
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCGAUUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAAAAGAAA
..............................(....(.....(......).....)(..........................................).).........................
>AANN01835346.1/6695-6820
UAUAAAAAGUUUCUGGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCGCUGAAACAAUCUUAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAGCAGAAA
..............................(....(.....(......).....)(..........................................).).........................
3 (()(U)C)C
(.ARYAA.)
U(RC(C))
 14 77.8
>AANN01835346.1/6695-6820
UAUAAAAAGUUUCUGGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCGCUGAAACAAUCUUAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAGCAGAAA
......................(..(....(....(.....(......).....)(..........................................).)....))...................
>ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
......................(..(....(....(.....(......).....)(.........................................).)....))...................
>AAWR02007510.1/95228-95353
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAGUUUUGGAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
......................(..(....(....(.....(......).....)(..........................................).)....))...................
>ABRP01180546.1/5965-5840
CAAGAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
......................(..(....(....(.....(......).....)(..........................................).)....))...................
>AACZ03072024.1/84930-85054
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
......................(..(....(....(.....(......).....)(.........................................).)....))...................
>AC022023.7/76347-76471
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
......................(..(....(....(.....(......).....)(.........................................).)....))...................
>AACN010833217.1/254-131
AGAUAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAAUUCUCACUUUACUGAAACAGUAUUGAAGUGUGAAUUGGUCCUGUAGUACUGUCAGAAACAACUC
......................(..(....(....(.....(......).....)(..........................................).)....)).................
>AAGU03026496.1/1499-1624
AGGCUAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACGGAUGCACUUUUGAAGUGUGGCUUGGUCCUGUAGUACUGUGUCAGAAACAACUG
......................(..(....(....(.....(......).....)(..........................................).)....))...................
>ABRT010035571.1/1210-1086
UAAAAAUUGUUUCUUGACCGGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCGCUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
......................(..(....(....(.....(......).....)(.........................................).)....))...................
>ABRR01225530.1/1389-1264
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCGAUUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAAAAGAAA
......................(..(....(....(.....(......).....)(..........................................).)....))...................
>DAAA02059264.1/10059-10184
UGAAGAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCUGCUGAAACAGUUUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
......................(..(....(....(.....(......).....)(..........................................).)....))...................
>AAPY01660575.1/1490-1366
UAAAAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUCUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
......................(..(....(....(.....(......).....)(.........................................).)....))...................
>AAPE02016436.1/88673-88548
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUUCACUGAAACAAUUUAGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAAACA
......................(..(....(....(.....(......).....)(..........................................).)....))...................
>ABDC01016136.1/1645-1521
AAAAAAUUGUUUCUUGACAAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
......................(..(....(....(.....(......).....)(.........................................).)....))...................
4 (()(U)C)C
(.ARYAA.)
U(RC(C))
U(U(G))
 12 66.7
>AAPY01660575.1/1490-1366
UAAAAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUCUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
>AAWR02007510.1/95228-95353
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAGUUUUGGAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
>ABRP01180546.1/5965-5840
CAAGAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
>ABRR01225530.1/1389-1264
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCGAUUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAAAAGAAA
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
>AAGU03026496.1/1499-1624
AGGCUAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACGGAUGCACUUUUGAAGUGUGGCUUGGUCCUGUAGUACUGUGUCAGAAACAACUG
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
>DAAA02059264.1/10059-10184
UGAAGAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCUGCUGAAACAGUUUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
>AAPE02016436.1/88673-88548
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUUCACUGAAACAAUUUAGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAAACA
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
>AACZ03072024.1/84930-85054
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
>AC022023.7/76347-76471
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
>ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
>ABDC01016136.1/1645-1521
AAAAAAUUGUUUCUUGACAAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
>ABRT010035571.1/1210-1086
UAAAAAUUGUUUCUUGACCGGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCGCUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
5 (()(U)C)C
(.ARYAA.)
U(RC(C))
U(U(G))
(.RAA.())
 9 50.0
>ABDC01016136.1/1645-1521
AAAAAAUUGUUUCUUGACAAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......))..
>ABRT010035571.1/1210-1086
UAAAAAUUGUUUCUUGACCGGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCGCUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......))..
>AAWR02007510.1/95228-95353
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAGUUUUGGAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))......))..
>AACZ03072024.1/84930-85054
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......))..
>AC022023.7/76347-76471
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......))..
>ABRR01225530.1/1389-1264
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCGAUUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAAAAGAAA
.(....(......(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))......))..
>AAPY01660575.1/1490-1366
UAAAAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUCUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......).).
>AAPE02016436.1/88673-88548
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUUCACUGAAACAAUUUAGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAAACA
.(....(......(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))......))..
>ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......))..
6 (()(U)C)C
(.ARYAA.)
U(RC(C))
U(U(G))
(.RAA.())
((G)U)G
 9 50.0
>AC022023.7/76347-76471
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......))..
>AAPE02016436.1/88673-88548
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUUCACUGAAACAAUUUAGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAAACA
.(....(......(.(.((...(..(....(....(.....(......).....)(..........................................).)....))...).).))......))..
>ABDC01016136.1/1645-1521
AAAAAAUUGUUUCUUGACAAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......))..
>AAPY01660575.1/1490-1366
UAAAAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUCUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......).).
>ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......))..
>ABRT010035571.1/1210-1086
UAAAAAUUGUUUCUUGACCGGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCGCUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......))..
>AAWR02007510.1/95228-95353
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAGUUUUGGAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(..........................................).)....))...).).))......))..
>ABRR01225530.1/1389-1264
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCGAUUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAAAAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(..........................................).)....))...).).))......))..
>AACZ03072024.1/84930-85054
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......))..
7 (()(U)C)C
(.ARYAA.)
U(RC(C))
U(U(G))
(.RAA.())
((G)U)G
A(YRN)U
 9 50.0
>AAWR02007510.1/95228-95353
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAGUUUUGGAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(....................(...).................).)....))...).).))......))..
>AAPE02016436.1/88673-88548
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUUCACUGAAACAAUUUAGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAAACA
.(....(......(.(.((...(..(....(....(.....(......).....)(....................(...).................).)....))...).).))......))..
>AC022023.7/76347-76471
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......))..
>AACZ03072024.1/84930-85054
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......))..
>ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......))..
>ABRT010035571.1/1210-1086
UAAAAAUUGUUUCUUGACCGGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCGCUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......))..
>AAPY01660575.1/1490-1366
UAAAAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUCUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......).).
>ABDC01016136.1/1645-1521
AAAAAAUUGUUUCUUGACAAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......))..
>ABRR01225530.1/1389-1264
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCGAUUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAAAAGAAA
.(....(......(.(.((...(..(....(....(.....(......).....)(....................(...).................).)....))...).).))......))..
8 (()(U)C)C
(.ARYAA.)
U(RC(C))
U(U(G))
(.RAA.())
((G)U)G
A(YRN)U
(.G.().R.)
 8 44.4
>ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
.(....(......(.(.((...(..(....(....(.(...(......)...).)(...................(...).................).)....))...).).))......))..
>ABRT010035571.1/1210-1086
UAAAAAUUGUUUCUUGACCGGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCGCUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.(...(......)...).)(...................(...).................).)....))...).).))......))..
>AAWR02007510.1/95228-95353
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAGUUUUGGAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.(...(......)...).)(....................(...).................).)....))...).).))......))..
>AC022023.7/76347-76471
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.(...(......)...).)(...................(...).................).)....))...).).))......))..
>AAPE02016436.1/88673-88548
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUUCACUGAAACAAUUUAGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAAACA
.(....(......(.(.((...(..(....(....(.(...(......)...).)(....................(...).................).)....))...).).))......))..
>ABDC01016136.1/1645-1521
AAAAAAUUGUUUCUUGACAAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.(...(......)...).)(...................(...).................).)....))...).).))......))..
>AACZ03072024.1/84930-85054
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
.(....(......(.(.((...(..(....(....(.(...(......)...).)(...................(...).................).)....))...).).))......))..
>ABRR01225530.1/1389-1264
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCGAUUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAAAAGAAA
.(....(......(.(.((...(..(....(....(.(...(......)...).)(....................(...).................).)....))...).).))......))..

>AAPE02016436.1/88673-88548
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUUCACUGAAACAAUUUAGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAAACA
..............................(....(..................)(..........................................).).........................
..............................(....(.....(......).....)(..........................................).).........................
......................(..(....(....(.....(......).....)(..........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
.(....(......(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(..........................................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(....................(...).................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.(...(......)...).)(....................(...).................).)....))...).).))......))..
>ABDC01016136.1/1645-1521
AAAAAAUUGUUUCUUGACAAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(.........................................).).........................
..............................(....(.....(......).....)(.........................................).).........................
......................(..(....(....(.....(......).....)(.........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.(...(......)...).)(...................(...).................).)....))...).).))......))..
>ABRR01225530.1/1389-1264
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCGAUUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAAAAGAAA
..............................(....(..................)(..........................................).).........................
..............................(....(.....(......).....)(..........................................).).........................
......................(..(....(....(.....(......).....)(..........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
.(....(......(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(..........................................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(....................(...).................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.(...(......)...).)(....................(...).................).)....))...).).))......))..
>AC022023.7/76347-76471
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(.........................................).).........................
..............................(....(.....(......).....)(.........................................).).........................
......................(..(....(....(.....(......).....)(.........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.(...(......)...).)(...................(...).................).)....))...).).))......))..
>AACZ03072024.1/84930-85054
AAAAAAUUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUUUCAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(.........................................).).........................
..............................(....(.....(......).....)(.........................................).).........................
......................(..(....(....(.....(......).....)(.........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.(...(......)...).)(...................(...).................).)....))...).).))......))..
>AAWR02007510.1/95228-95353
UAAAAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAGUUUUGGAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(..........................................).).........................
..............................(....(.....(......).....)(..........................................).).........................
......................(..(....(....(.....(......).....)(..........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
.(....(......(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(..........................................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(....................(...).................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.(...(......)...).)(....................(...).................).)....))...).).))......))..
>ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
..............................(....(..................)(.........................................).).........................
..............................(....(.....(......).....)(.........................................).).........................
......................(..(....(....(.....(......).....)(.........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.(...(......)...).)(...................(...).................).)....))...).).))......))..
>ABRT010035571.1/1210-1086
UAAAAAUUGUUUCUUGACCGGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCGCUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(.........................................).).........................
..............................(....(.....(......).....)(.........................................).).........................
......................(..(....(....(.....(......).....)(.........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......))..
.(....(......(.(.((...(..(....(....(.(...(......)...).)(...................(...).................).)....))...).).))......))..
>AAPY01660575.1/1490-1366
UAAAAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCCACUGAAAUGAUCUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
..............................(....(..................)(.........................................).).........................
..............................(....(.....(......).....)(.........................................).).........................
......................(..(....(....(.....(......).....)(.........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))..........
.(....(......(.(......(..(....(....(.....(......).....)(.........................................).)....)).......))......).).
.(....(......(.(.((...(..(....(....(.....(......).....)(.........................................).)....))...).).))......).).
.(....(......(.(.((...(..(....(....(.....(......).....)(...................(...).................).)....))...).).))......).).
>DAAA02059264.1/10059-10184
UGAAGAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCUGCUGAAACAGUUUUGAAGUGCGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(....(..................)(..........................................).).........................
..............................(....(.....(......).....)(..........................................).).........................
......................(..(....(....(.....(......).....)(..........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
>AAGU03026496.1/1499-1624
AGGCUAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACGGAUGCACUUUUGAAGUGUGGCUUGGUCCUGUAGUACUGUGUCAGAAACAACUG
..............................(....(..................)(..........................................).).........................
..............................(....(.....(......).....)(..........................................).).........................
......................(..(....(....(.....(......).....)(..........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
>ABRP01180546.1/5965-5840
CAAGAAAUGUUUCUUGACCAGUUGCCUGCAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAACUC
..............................(....(..................)(..........................................).).........................
..............................(....(.....(......).....)(..........................................).).........................
......................(..(....(....(.....(......).....)(..........................................).)....))...................
.............(.(......(..(....(....(.....(......).....)(..........................................).)....)).......))..........
>AANN01835346.1/6695-6820
UAUAAAAAGUUUCUGGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACUCCGCUGAAACAAUCUUAAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAGCAGAAA
..............................(....(..................)(..........................................).).........................
..............................(....(.....(......).....)(..........................................).).........................
......................(..(....(....(.....(......).....)(..........................................).)....))...................
>AACN010833217.1/254-131
AGAUAAAUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAAUUCUCACUUUACUGAAACAGUAUUGAAGUGUGAAUUGGUCCUGUAGUACUGUCAGAAACAACUC
..............................(....(..................)(..........................................).).......................
..............................(....(.....(......).....)(..........................................).).......................
......................(..(....(....(.....(......).....)(..........................................).)....)).................
>ABVD01205953.1/236-113
UAAAAAGUGUUUCUUGACCAGUUGCCUACAGCUGAUGAGCUCCAGUCAGAGCGAAACCAGUUCUCACUCCACAGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUCAGAAACAACUC
..............................(....(..................)(..........................................).).......................
>ABRN01381274.1/4843-4718
AAGUAAAUGUUUCUCGACCAGUUGCCUACAGCUGACGAGCUCCAGUAAGAGCGAAACCACUUCUCACUCCACUGAAACAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACAGAAA
..............................(...(..................).(..........................................).).........................

ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio
1 (.ARYAA.) < 0.001 88.5
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
2 U(RC(C)) < 0.001 104
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
3 (()(U)C)C < 0.001 24.9
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
4 U(U(G)) < 0.001 17.1
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
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5 (.RAA.()) < 0.001 6.14
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
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6 ((G)U)G < 0.001 9.28
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
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7 A(YRN)U < 0.001 9.46
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
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8 (.G.().R.) 0.00863 1.07
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
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ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio

NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio
1 (.ARYAA.) < 0.001 88.5
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
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2 G(CU(G)) < 0.001 120
ABRO01075407.1/4297-4173
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
AAAAAAUUGUUUCUUGACCAGUUACCUACAGCUGAUGAGCUCCAGUAAGAGCGAAACCAGUUCUCACCUGUUGAAAUAAUUUUGAAGUGUGAAUUGGUCCUGUAGUACUGUGUCAGAAACGGAAA
...................................................................................................1.........................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.....
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NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).