D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major
D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences
J. Mol. Biol., 435 (2023)

mir-19 microRNA precursor family   (Rfam: RF00245)

Seed sequences
All NCMs (CSV file) (all) positive sequences (all) negative sequences (random) (training) positive sequences (training) negative sequences (testing) positive sequences (testing) negative sequences 

Options
Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN
Rfam
D-ORB
Augmented
((U)CY)A
((Y)UG)U
(()UGR)
((C)A)A
(.NNAUR.)
U(U(A))
((A)U)G
C(N(N))
100.0
100.0
97.1
100.0
97.1
88.6
100.0
100.0
((U)CY)A
(()UGR)
C(N(N))

% of positive sequence with ORB





Deep neural network:

5-fold cross-validation: 99.8 %
(± 0.185 %)
Decision tree:

5-fold cross-validation: 95.8 %
(± 3.1 %)
D-ORB structure
D-ORB structure decision tree:

5-fold cross-validation: 96.9 %
(± 2.6 %)
of AAFC03125572.1/1362-1437
AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.(((((.((((((((.((.(((((..((.(.(((......))))))..))).)))..).)))))))).))))...)
.........1.........2.........3.........4.........5.........6.........7......
1234567890123456789012345678901234567890123456789012345678901234567890123456

abstract shape: ()

Number of sequences
Structure ORBs (out of 35) (%)
1 ((U)CY)A
 35 100.0
>CAAB02000121.1/15413-15484
CUCUGCUAGUUUUGCAUAGUUGCACUACAAGAAUAGAGGAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((................................)..)..................
>AAEX03026925.1/968921-968842
UCCGGUUAGUUUUGCAGGUUUGCAUUUCAGCGUACUUGUGCAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
................((........................................)..)..................
>AF480555.1/4-78
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((...................................)..)..................
>AANH01005312.1/95619-95548
CUCCGUUAGUUUUGCAUAGUUGCGCUCCAAGAAGAAAUGCGUUGUGCAAAUCUAUGCAAAGCUAACGGUGGC
................((................................)..)..................
>AY866318.1/761-832
CUCUGUUAGUUUUGCAUAGUUGCACUACAGGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((................................)..)..................
>AY866366.1/713-792
UACAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>AAKN02053349.1/40109-40028
UACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAGAUAUAUCUACAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((..........................................)..)..................
>AAWZ02030636.1/2841-2915
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUGUGUUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
................((...................................)..)..................
>AY866311.1/740-811
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGCAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((................................)..)..................
>AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((....................................)..)..................
>AY866360.1/1064-1143
UACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>AF480556.1/2-81
UACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUGUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>AAWR02034046.1/17116-17037
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>AAHX01085677.1/2212-2286
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((...................................)..)..................
>AAPY01386199.1/1137-1058
UACAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>AY866362.1/494-567
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUAAGGCUGUGCAAAUCCAUGCAAAACUGAUCGUGAU
................((..................................)..)..................
>AAFR03020267.1/47295-47221
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((...................................)..)..................
>AAQR03131415.1/5488-5410
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUUGUGUAUAUCAGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.......................................)..)..................
>AAIY01238597.1/3252-3175
UACGGUGAGUUUUGCAGGUUUGCAUUUCAGCAUGUAUGUAUCUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAG
................((......................................)..)..................
>AAYZ01184872.1/1043-1117
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAGUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((...................................)..)..................
>AY866310.1/774-848
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((...................................)..)..................
>AAQQ01373887.1/2650-2573
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCAUAUAUGUAUACAUAGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
................((......................................)..)..................
>AADA01312424.1/2142-2221
AGGAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUAAAGGGGUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>CAAK05051440.1/16032-15961
CUCUGCUAGUUUUGCAUAGUUGCACUACAAGAAAUAUUGAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((................................)..)..................
>AALT01065661.1/586-507
CCCAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAAAUCUACAGGGCUGUGCAAAUCCAUGCAAAACUGACUGUGAU
................((........................................)..)..................
>CR390304.1/227-301
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUACUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
................((...................................)..)..................
>BAAF04019480.1/13763-13692
CUCUGUUAGUUUUGCAUAGUUGCACUGCAAGAAGAGAUGCGUUGUGCAAAUCUAUGCAAAGCUGAUAGUGGC
................((................................)..)..................
>AAGU03084137.1/1014-941
UACAGUUAGUUUUGCAGGUUUGCAUUGCAGUAUAUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGACGGUGAU
................((..................................)..)..................
>AAHY01210291.1/5583-5504
UACGAUUAGUUUUGCAGAUUUGCAGUUCAGCGUAUAUGUGAAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGGG
................((........................................)..)..................
>AAPN01226808.1/924-995
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGACGGUGGC
................((................................)..)..................
>CAAE01014781.1/2073487-2073558
CUCUGUCAGUUUUGCAUGGUUGCGCUGCAAGAAGAAAUAAGUUGUGCAAAUCUAUGCAAAACUGACAGCGGU
................((................................)..)..................
>AAGW02046787.1/21646-21567
CACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACCUGUAUACAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>AANG01459906.1/2349-2270
UACGGUUAGUUUUGCAGGUUUGCAUUUCAGCGGAUAUAUGUAUGUAUAGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
....................(..(..................................)..)..................
>ABDC01275774.1/2263-2184
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>AF480554.1/6-77
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((................................)..)..................
2 ((U)CY)A
((Y)UG)U
 30 85.7
>AAQR03131415.1/5488-5410
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUUGUGUAUAUCAGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.....(.....(..................)..).....)..)..................
>AAQQ01373887.1/2650-2573
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCAUAUAUGUAUACAUAGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
................((.....(.....(.................)..).....)..)..................
>CR390304.1/227-301
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUACUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
................((.....(.(..................)..).....)..)..................
>AAGW02046787.1/21646-21567
CACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACCUGUAUACAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.....(.....(...................)..).....)..)..................
>AF480554.1/6-77
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((.....((................)..).....)..)..................
>AANG01459906.1/2349-2270
UACGGUUAGUUUUGCAGGUUUGCAUUUCAGCGGAUAUAUGUAUGUAUAGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.....(.....(...................)..).....)..)..................
>AAWR02034046.1/17116-17037
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.....(.....(...................)..).....)..)..................
>AAYZ01184872.1/1043-1117
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAGUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((.....(.(..................)..).....)..)..................
>AAKN02053349.1/40109-40028
UACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAGAUAUAUCUACAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.....(.....(.....................)..).....)..)..................
>AY866311.1/740-811
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGCAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((.....((................)..).....)..)..................
>ABDC01275774.1/2263-2184
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.....(.....(...................)..).....)..)..................
>AAFR03020267.1/47295-47221
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((.....(.(..................)..).....)..)..................
>AAPY01386199.1/1137-1058
UACAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.....(.....(...................)..).....)..)..................
>AAHY01210291.1/5583-5504
UACGAUUAGUUUUGCAGAUUUGCAGUUCAGCGUAUAUGUGAAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGGG
................((.....(.....(...................)..).....)..)..................
>AAHX01085677.1/2212-2286
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((.....(.(..................)..).....)..)..................
>CAAK05051440.1/16032-15961
CUCUGCUAGUUUUGCAUAGUUGCACUACAAGAAAUAUUGAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((.....((................)..).....)..)..................
>AAGU03084137.1/1014-941
UACAGUUAGUUUUGCAGGUUUGCAUUGCAGUAUAUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGACGGUGAU
................((.....(..(................)..).....)..)..................
>AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.....(..(..................)..).....)..)..................
>AY866318.1/761-832
CUCUGUUAGUUUUGCAUAGUUGCACUACAGGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((.....((................)..).....)..)..................
>AAEX03026925.1/968921-968842
UCCGGUUAGUUUUGCAGGUUUGCAUUUCAGCGUACUUGUGCAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
................((.....(.....(...................)..).....)..)..................
>AADA01312424.1/2142-2221
AGGAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUAAAGGGGUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.....(.....(...................)..).....)..)..................
>AANH01005312.1/95619-95548
CUCCGUUAGUUUUGCAUAGUUGCGCUCCAAGAAGAAAUGCGUUGUGCAAAUCUAUGCAAAGCUAACGGUGGC
................((.....((................)..).....)..)..................
>AF480555.1/4-78
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((.....(.(..................)..).....)..)..................
>AY866310.1/774-848
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((.....(.(..................)..).....)..)..................
>AALT01065661.1/586-507
CCCAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAAAUCUACAGGGCUGUGCAAAUCCAUGCAAAACUGACUGUGAU
................((.....(.....(...................)..).....)..)..................
>BAAF04019480.1/13763-13692
CUCUGUUAGUUUUGCAUAGUUGCACUGCAAGAAGAGAUGCGUUGUGCAAAUCUAUGCAAAGCUGAUAGUGGC
................((.....((................)..).....)..)..................
>AAWZ02030636.1/2841-2915
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUGUGUUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
................((.....(.(..................)..).....)..)..................
>AY866362.1/494-567
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUAAGGCUGUGCAAAUCCAUGCAAAACUGAUCGUGAU
................((.....((..................)..).....)..)..................
>AAIY01238597.1/3252-3175
UACGGUGAGUUUUGCAGGUUUGCAUUUCAGCAUGUAUGUAUCUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAG
................((.....(....(..................)..).....)..)..................
>AAPN01226808.1/924-995
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGACGGUGGC
................((.....((................)..).....)..)..................
3 ((U)CY)A
((Y)UG)U
(()UGR)
 29 82.9
>AY866310.1/774-848
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((.....(.(..................)..).....)..).............)...)
>AAPN01226808.1/924-995
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGACGGUGGC
(.(.............((.....((................)..).....)..).............)...)
>AANG01459906.1/2349-2270
UACGGUUAGUUUUGCAGGUUUGCAUUUCAGCGGAUAUAUGUAUGUAUAGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((.....(.....(...................)..).....)..).............)...)
>AAHX01085677.1/2212-2286
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((.....(.(..................)..).....)..).............)...)
>AY866362.1/494-567
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUAAGGCUGUGCAAAUCCAUGCAAAACUGAUCGUGAU
.((.............((.....((..................)..).....)..).............)...)
>ABDC01275774.1/2263-2184
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((.....(.....(...................)..).....)..).............)...)
>AAGU03084137.1/1014-941
UACAGUUAGUUUUGCAGGUUUGCAUUGCAGUAUAUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGACGGUGAU
(.(.............((.....(..(................)..).....)..).............)...)
>AAHY01210291.1/5583-5504
UACGAUUAGUUUUGCAGAUUUGCAGUUCAGCGUAUAUGUGAAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGGG
(.(.............((.....(.....(...................)..).....)..).............)...)
>AAEX03026925.1/968921-968842
UCCGGUUAGUUUUGCAGGUUUGCAUUUCAGCGUACUUGUGCAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
(.(.............((.....(.....(...................)..).....)..).............)...)
>AAYZ01184872.1/1043-1117
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAGUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((.....(.(..................)..).....)..).............)...)
>AAQR03131415.1/5488-5410
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUUGUGUAUAUCAGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((.....(.....(..................)..).....)..).............)...)
>AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((.....(..(..................)..).....)..).............)...)
>CAAK05051440.1/16032-15961
CUCUGCUAGUUUUGCAUAGUUGCACUACAAGAAAUAUUGAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((.....((................)..).....)..).............)...)
>AF480554.1/6-77
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((.....((................)..).....)..).............)...)
>AY866318.1/761-832
CUCUGUUAGUUUUGCAUAGUUGCACUACAGGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((.....((................)..).....)..).............)...)
>AAWR02034046.1/17116-17037
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((.....(.....(...................)..).....)..).............)...)
>AAGW02046787.1/21646-21567
CACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACCUGUAUACAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((.....(.....(...................)..).....)..).............)...)
>BAAF04019480.1/13763-13692
CUCUGUUAGUUUUGCAUAGUUGCACUGCAAGAAGAGAUGCGUUGUGCAAAUCUAUGCAAAGCUGAUAGUGGC
(.(.............((.....((................)..).....)..).............)...)
>AAQQ01373887.1/2650-2573
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCAUAUAUGUAUACAUAGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
.((.............((.....(.....(.................)..).....)..).............)...)
>AANH01005312.1/95619-95548
CUCCGUUAGUUUUGCAUAGUUGCGCUCCAAGAAGAAAUGCGUUGUGCAAAUCUAUGCAAAGCUAACGGUGGC
(.(.............((.....((................)..).....)..).............)...)
>AAFR03020267.1/47295-47221
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((.....(.(..................)..).....)..).............)...)
>AADA01312424.1/2142-2221
AGGAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUAAAGGGGUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
(.(.............((.....(.....(...................)..).....)..).............)...)
>CR390304.1/227-301
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUACUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
(.(.............((.....(.(..................)..).....)..).............)...)
>AF480555.1/4-78
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((.....(.(..................)..).....)..).............)...)
>AALT01065661.1/586-507
CCCAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAAAUCUACAGGGCUGUGCAAAUCCAUGCAAAACUGACUGUGAU
(.(.............((.....(.....(...................)..).....)..).............)...)
>AY866311.1/740-811
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGCAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((.....((................)..).....)..).............)...)
>AAWZ02030636.1/2841-2915
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUGUGUUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
(.(.............((.....(.(..................)..).....)..).............)...)
>AAPY01386199.1/1137-1058
UACAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((.....(.....(...................)..).....)..).............)...)
>AAIY01238597.1/3252-3175
UACGGUGAGUUUUGCAGGUUUGCAUUUCAGCAUGUAUGUAUCUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAG
(.(.............((.....(....(..................)..).....)..).............)...)
4 ((U)CY)A
((Y)UG)U
(()UGR)
((C)A)A
 29 82.9
>AAHX01085677.1/2212-2286
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((..((.(.(..................)..).).).)..).............)...)
>ABDC01275774.1/2263-2184
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(...................)..).).).)..).............)...)
>AAWZ02030636.1/2841-2915
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUGUGUUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
(.(.............((..((.(.(..................)..).).).)..).............)...)
>BAAF04019480.1/13763-13692
CUCUGUUAGUUUUGCAUAGUUGCACUGCAAGAAGAGAUGCGUUGUGCAAAUCUAUGCAAAGCUGAUAGUGGC
(.(.............((..((.((................)..).).).)..).............)...)
>AAPN01226808.1/924-995
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGACGGUGGC
(.(.............((..((.((................)..).).).)..).............)...)
>AAIY01238597.1/3252-3175
UACGGUGAGUUUUGCAGGUUUGCAUUUCAGCAUGUAUGUAUCUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAG
(.(.............((..((.(....(..................)..).).).)..).............)...)
>AAQQ01373887.1/2650-2573
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCAUAUAUGUAUACAUAGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
.((.............((..((.(.....(.................)..).).).)..).............)...)
>AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(..(..................)..).).).)..).............)...)
>AAHY01210291.1/5583-5504
UACGAUUAGUUUUGCAGAUUUGCAGUUCAGCGUAUAUGUGAAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGGG
(.(.............((..((.(.....(...................)..).).).)..).............)...)
>AANH01005312.1/95619-95548
CUCCGUUAGUUUUGCAUAGUUGCGCUCCAAGAAGAAAUGCGUUGUGCAAAUCUAUGCAAAGCUAACGGUGGC
(.(.............((..((.((................)..).).).)..).............)...)
>AAGW02046787.1/21646-21567
CACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACCUGUAUACAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(...................)..).).).)..).............)...)
>AY866318.1/761-832
CUCUGUUAGUUUUGCAUAGUUGCACUACAGGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((..((.((................)..).).).)..).............)...)
>CR390304.1/227-301
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUACUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
(.(.............((..((.(.(..................)..).).).)..).............)...)
>AAYZ01184872.1/1043-1117
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAGUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((..((.(.(..................)..).).).)..).............)...)
>AALT01065661.1/586-507
CCCAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAAAUCUACAGGGCUGUGCAAAUCCAUGCAAAACUGACUGUGAU
(.(.............((..((.(.....(...................)..).).).)..).............)...)
>AADA01312424.1/2142-2221
AGGAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUAAAGGGGUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
(.(.............((..((.(.....(...................)..).).).)..).............)...)
>AAWR02034046.1/17116-17037
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(...................)..).).).)..).............)...)
>AAFR03020267.1/47295-47221
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((..((.(.(..................)..).).).)..).............)...)
>AAPY01386199.1/1137-1058
UACAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(...................)..).).).)..).............)...)
>AAQR03131415.1/5488-5410
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUUGUGUAUAUCAGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(..................)..).).).)..).............)...)
>AF480554.1/6-77
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((..((.((................)..).).).)..).............)...)
>AAGU03084137.1/1014-941
UACAGUUAGUUUUGCAGGUUUGCAUUGCAGUAUAUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGACGGUGAU
(.(.............((..((.(..(................)..).).).)..).............)...)
>AF480555.1/4-78
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((..((.(.(..................)..).).).)..).............)...)
>CAAK05051440.1/16032-15961
CUCUGCUAGUUUUGCAUAGUUGCACUACAAGAAAUAUUGAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((..((.((................)..).).).)..).............)...)
>AY866311.1/740-811
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGCAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((..((.((................)..).).).)..).............)...)
>AY866362.1/494-567
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUAAGGCUGUGCAAAUCCAUGCAAAACUGAUCGUGAU
.((.............((..((.((..................)..).).).)..).............)...)
>AY866310.1/774-848
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((..((.(.(..................)..).).).)..).............)...)
>AANG01459906.1/2349-2270
UACGGUUAGUUUUGCAGGUUUGCAUUUCAGCGGAUAUAUGUAUGUAUAGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(...................)..).).).)..).............)...)
>AAEX03026925.1/968921-968842
UCCGGUUAGUUUUGCAGGUUUGCAUUUCAGCGUACUUGUGCAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
(.(.............((..((.(.....(...................)..).).).)..).............)...)
5 ((U)CY)A
((Y)UG)U
(()UGR)
((C)A)A
(.NNAUR.)
 25 71.4
>AAPN01226808.1/924-995
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGACGGUGGC
(.(.............((..((.((......(......)..)..).).).)..).............)...)
>AAHY01210291.1/5583-5504
UACGAUUAGUUUUGCAGAUUUGCAGUUCAGCGUAUAUGUGAAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGGG
(.(.............((..((.(.....(.....(........)....)..).).).)..).............)...)
>AF480554.1/6-77
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((..((.((......(......)..)..).).).)..).............)...)
>AY866318.1/761-832
CUCUGUUAGUUUUGCAUAGUUGCACUACAGGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((..((.((......(......)..)..).).).)..).............)...)
>AAQQ01373887.1/2650-2573
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCAUAUAUGUAUACAUAGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
.((.............((..((.(.....(.....(......)....)..).).).)..).............)...)
>BAAF04019480.1/13763-13692
CUCUGUUAGUUUUGCAUAGUUGCACUGCAAGAAGAGAUGCGUUGUGCAAAUCUAUGCAAAGCUGAUAGUGGC
(.(.............((..((.((.....(........).)..).).).)..).............)...)
>CR390304.1/227-301
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUACUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
>AAPY01386199.1/1137-1058
UACAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(....(........).....)..).).).)..).............)...)
>AAFR03020267.1/47295-47221
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
>AAEX03026925.1/968921-968842
UCCGGUUAGUUUUGCAGGUUUGCAUUUCAGCGUACUUGUGCAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
(.(.............((..((.(.....(......(.......)....)..).).).)..).............)...)
>AAHX01085677.1/2212-2286
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
>AAYZ01184872.1/1043-1117
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAGUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
>AANG01459906.1/2349-2270
UACGGUUAGUUUUGCAGGUUUGCAUUUCAGCGGAUAUAUGUAUGUAUAGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(.....(........)....)..).).).)..).............)...)
>AF480555.1/4-78
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
>AANH01005312.1/95619-95548
CUCCGUUAGUUUUGCAUAGUUGCGCUCCAAGAAGAAAUGCGUUGUGCAAAUCUAUGCAAAGCUAACGGUGGC
(.(.............((..((.((.....(........).)..).).).)..).............)...)
>ABDC01275774.1/2263-2184
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(.....(........)....)..).).).)..).............)...)
>AADA01312424.1/2142-2221
AGGAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUAAAGGGGUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
(.(.............((..((.(.....(....(.......)......)..).).).)..).............)...)
>AAWR02034046.1/17116-17037
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(.....(........)....)..).).).)..).............)...)
>AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(..(......(......)....)..).).).)..).............)...)
>AAWZ02030636.1/2841-2915
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUGUGUUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
>AAQR03131415.1/5488-5410
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUUGUGUAUAUCAGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((.............((..((.(.....(......(......)....)..).).).)..).............)...)
>AY866362.1/494-567
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUAAGGCUGUGCAAAUCCAUGCAAAACUGAUCGUGAU
.((.............((..((.((.....(........)...)..).).).)..).............)...)
>AY866310.1/774-848
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
>CAAK05051440.1/16032-15961
CUCUGCUAGUUUUGCAUAGUUGCACUACAAGAAAUAUUGAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((..((.((.....(.....)....)..).).).)..).............)...)
>AY866311.1/740-811
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGCAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(.............((..((.((......(......)..)..).).).)..).............)...)
6 ((U)CY)A
((Y)UG)U
(()UGR)
((C)A)A
(.NNAUR.)
U(U(A))
 20 57.1
>AAPN01226808.1/924-995
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGACGGUGGC
(.(..(.(........((..((.((......(......)..)..).).).)..)........).)..)...)
>AAWZ02030636.1/2841-2915
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUGUGUUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
>AAHY01210291.1/5583-5504
UACGAUUAGUUUUGCAGAUUUGCAGUUCAGCGUAUAUGUGAAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGGG
(.(..(.(........((..((.(.....(.....(........)....)..).).).)..)........).)..)...)
>AF480555.1/4-78
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
>AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
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>AAQR03131415.1/5488-5410
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUUGUGUAUAUCAGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(........((..((.(.....(......(......)....)..).).).)..)........).)..)...)
>AAYZ01184872.1/1043-1117
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAGUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
>AANG01459906.1/2349-2270
UACGGUUAGUUUUGCAGGUUUGCAUUUCAGCGGAUAUAUGUAUGUAUAGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(........((..((.(.....(.....(........)....)..).).).)..)........).)..)...)
>AY866310.1/774-848
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
>AF480554.1/6-77
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(..(.(........((..((.((......(......)..)..).).).)..)........).)..)...)
>AY866311.1/740-811
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGCAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(..(.(........((..((.((......(......)..)..).).).)..)........).)..)...)
>AAWR02034046.1/17116-17037
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(........((..((.(.....(.....(........)....)..).).).)..)........).)..)...)
>AAFR03020267.1/47295-47221
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
>AAQQ01373887.1/2650-2573
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCAUAUAUGUAUACAUAGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
.((..(.(........((..((.(.....(.....(......)....)..).).).)..)........).)..)...)
>AY866318.1/761-832
CUCUGUUAGUUUUGCAUAGUUGCACUACAGGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(..(.(........((..((.((......(......)..)..).).).)..)........).)..)...)
>CR390304.1/227-301
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUACUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
>AAHX01085677.1/2212-2286
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
>AAEX03026925.1/968921-968842
UCCGGUUAGUUUUGCAGGUUUGCAUUUCAGCGUACUUGUGCAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
(.(..(.(........((..((.(.....(......(.......)....)..).).).)..)........).)..)...)
>AY866362.1/494-567
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUAAGGCUGUGCAAAUCCAUGCAAAACUGAUCGUGAU
.((..(.(........((..((.((.....(........)...)..).).).)..)........).)..)...)
>ABDC01275774.1/2263-2184
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(........((..((.(.....(.....(........)....)..).).).)..)........).)..)...)
7 ((U)CY)A
((Y)UG)U
(()UGR)
((C)A)A
(.NNAUR.)
U(U(A))
((A)U)G
 20 57.1
>AY866318.1/761-832
CUCUGUUAGUUUUGCAUAGUUGCACUACAGGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(..(.(......(.((..((.(..(..(........)..)..).).).)..).)......).)..)...)
>AAQR03131415.1/5488-5410
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUUGUGUAUAUCAGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(......(.((..((.(.....(......(......)....)..).).).)..).)......).)..)...)
>AY866362.1/494-567
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUAAGGCUGUGCAAAUCCAUGCAAAACUGAUCGUGAU
.((..(.(......(.((..((.((.....(........)...)..).).).)..).)......).)..)...)
>AAQQ01373887.1/2650-2573
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCAUAUAUGUAUACAUAGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
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>AAHY01210291.1/5583-5504
UACGAUUAGUUUUGCAGAUUUGCAGUUCAGCGUAUAUGUGAAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGGG
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>AAHX01085677.1/2212-2286
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
>CR390304.1/227-301
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUACUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
>AY866310.1/774-848
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
>AAFR03020267.1/47295-47221
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
>AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(......(.((..((.(..(......(......)....)..).).).)..).)......).)..)...)
>ABDC01275774.1/2263-2184
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(......(.((..((.(.....(.....(........)....)..).).).)..).)......).)..)...)
>AF480554.1/6-77
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(..(.(......(.((..((.(..(..(........)..)..).).).)..).)......).)..)...)
>AAWR02034046.1/17116-17037
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(......(.((..((.(.....(.....(........)....)..).).).)..).)......).)..)...)
>AAPN01226808.1/924-995
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGACGGUGGC
(.(..(.(......(.((..((.(..(..(........)..)..).).).)..).)......).)..)...)
>AAEX03026925.1/968921-968842
UCCGGUUAGUUUUGCAGGUUUGCAUUUCAGCGUACUUGUGCAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
(.(..(.(......(.((..((.(.....(......(.......)....)..).).).)..).)......).)..)...)
>AAYZ01184872.1/1043-1117
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAGUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
>AY866311.1/740-811
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGCAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
(.(..(.(......(.((..((.(..(..(........)..)..).).).)..).)......).)..)...)
>AAWZ02030636.1/2841-2915
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUGUGUUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
>AANG01459906.1/2349-2270
UACGGUUAGUUUUGCAGGUUUGCAUUUCAGCGGAUAUAUGUAUGUAUAGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(......(.((..((.(.....(.....(........)....)..).).).)..).)......).)..)...)
>AF480555.1/4-78
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
8 ((U)CY)A
((Y)UG)U
(()UGR)
((C)A)A
(.NNAUR.)
U(U(A))
((A)U)G
C(N(N))
 12 34.3
>AAQQ01373887.1/2650-2573
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCAUAUAUGUAUACAUAGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
.((..(.(......(.((..((.(.....((.(..(......)..)))..).).).)..).)......).)..)...)
>AAYZ01184872.1/1043-1117
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAGUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(......(.((..((.(.((.(...(......).).))..).).).)..).)......).)..)...)
>AF480555.1/4-78
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(......(.((..((.(.((.(...(......).).))..).).).)..).)......).)..)...)
>AY866310.1/774-848
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(......(.((..((.(.((.(...(......).).))..).).).)..).)......).)..)...)
>AAHX01085677.1/2212-2286
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
(.(..(.(......(.((..((.(.((.(...(......).).))..).).).)..).)......).)..)...)
>ABDC01275774.1/2263-2184
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(......(.((..((.(.....((.(..(........)..)))..).).).)..).)......).)..)...)
>AAWR02034046.1/17116-17037
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(......(.((..((.(.....((.(..(........)..)))..).).).)..).)......).)..)...)
>AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(......(.((..((.(..((.(...(......)..)))..).).).)..).)......).)..)...)
>AANG01459906.1/2349-2270
UACGGUUAGUUUUGCAGGUUUGCAUUUCAGCGGAUAUAUGUAUGUAUAGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(......(.((..((.(.....((.(..(........)..)))..).).).)..).)......).)..)...)
>AAEX03026925.1/968921-968842
UCCGGUUAGUUUUGCAGGUUUGCAUUUCAGCGUACUUGUGCAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
(.(..(.(......(.((..((.(.....((.(...(.......)..)))..).).).)..).)......).)..)...)
>AAHY01210291.1/5583-5504
UACGAUUAGUUUUGCAGAUUUGCAGUUCAGCGUAUAUGUGAAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGGG
(.(..(.(......(.((..((.(.....((.(..(........)..)))..).).).)..).)......).)..)...)
>AAQR03131415.1/5488-5410
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUUGUGUAUAUCAGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.((..(.(......(.((..((.(.....((.(...(......)..)))..).).).)..).)......).)..)...)

>AAEX03026925.1/968921-968842
UCCGGUUAGUUUUGCAGGUUUGCAUUUCAGCGUACUUGUGCAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
................((........................................)..)..................
................((.....(.....(...................)..).....)..)..................
(.(.............((.....(.....(...................)..).....)..).............)...)
(.(.............((..((.(.....(...................)..).).).)..).............)...)
(.(.............((..((.(.....(......(.......)....)..).).).)..).............)...)
(.(..(.(........((..((.(.....(......(.......)....)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(.....(......(.......)....)..).).).)..).)......).)..)...)
(.(..(.(......(.((..((.(.....((.(...(.......)..)))..).).).)..).)......).)..)...)
>AF480555.1/4-78
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((...................................)..)..................
................((.....(.(..................)..).....)..)..................
(.(.............((.....(.(..................)..).....)..).............)...)
(.(.............((..((.(.(..................)..).).).)..).............)...)
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
(.(..(.(......(.((..((.(.((.(...(......).).))..).).).)..).)......).)..)...)
>AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((....................................)..)..................
................((.....(..(..................)..).....)..)..................
.((.............((.....(..(..................)..).....)..).............)...)
.((.............((..((.(..(..................)..).).).)..).............)...)
.((.............((..((.(..(......(......)....)..).).).)..).............)...)
.((..(.(........((..((.(..(......(......)....)..).).).)..)........).)..)...)
.((..(.(......(.((..((.(..(......(......)....)..).).).)..).)......).)..)...)
.((..(.(......(.((..((.(..((.(...(......)..)))..).).).)..).)......).)..)...)
>AAWR02034046.1/17116-17037
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
................((.....(.....(...................)..).....)..)..................
.((.............((.....(.....(...................)..).....)..).............)...)
.((.............((..((.(.....(...................)..).).).)..).............)...)
.((.............((..((.(.....(.....(........)....)..).).).)..).............)...)
.((..(.(........((..((.(.....(.....(........)....)..).).).)..)........).)..)...)
.((..(.(......(.((..((.(.....(.....(........)....)..).).).)..).)......).)..)...)
.((..(.(......(.((..((.(.....((.(..(........)..)))..).).).)..).)......).)..)...)
>AAHX01085677.1/2212-2286
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((...................................)..)..................
................((.....(.(..................)..).....)..)..................
(.(.............((.....(.(..................)..).....)..).............)...)
(.(.............((..((.(.(..................)..).).).)..).............)...)
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
(.(..(.(......(.((..((.(.((.(...(......).).))..).).).)..).)......).)..)...)
>AAQR03131415.1/5488-5410
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUUGUGUAUAUCAGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((.......................................)..)..................
................((.....(.....(..................)..).....)..)..................
.((.............((.....(.....(..................)..).....)..).............)...)
.((.............((..((.(.....(..................)..).).).)..).............)...)
.((.............((..((.(.....(......(......)....)..).).).)..).............)...)
.((..(.(........((..((.(.....(......(......)....)..).).).)..)........).)..)...)
.((..(.(......(.((..((.(.....(......(......)....)..).).).)..).)......).)..)...)
.((..(.(......(.((..((.(.....((.(...(......)..)))..).).).)..).)......).)..)...)
>AAYZ01184872.1/1043-1117
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUGAUAGUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((...................................)..)..................
................((.....(.(..................)..).....)..)..................
(.(.............((.....(.(..................)..).....)..).............)...)
(.(.............((..((.(.(..................)..).).).)..).............)...)
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
(.(..(.(......(.((..((.(.((.(...(......).).))..).).).)..).)......).)..)...)
>AY866310.1/774-848
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUGUAAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((...................................)..)..................
................((.....(.(..................)..).....)..)..................
(.(.............((.....(.(..................)..).....)..).............)...)
(.(.............((..((.(.(..................)..).).).)..).............)...)
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
(.(..(.(......(.((..((.(.((.(...(......).).))..).).).)..).)......).)..)...)
>AAQQ01373887.1/2650-2573
UACGAUUAGUUUUGCAGGUUUGCAUUUCAGCAUAUAUGUAUACAUAGCUGUGCAAAUCCAUGCAAAACUGACCGUGAU
................((......................................)..)..................
................((.....(.....(.................)..).....)..)..................
.((.............((.....(.....(.................)..).....)..).............)...)
.((.............((..((.(.....(.................)..).).).)..).............)...)
.((.............((..((.(.....(.....(......)....)..).).).)..).............)...)
.((..(.(........((..((.(.....(.....(......)....)..).).).)..)........).)..)...)
.((..(.(......(.((..((.(.....(.....(......)....)..).).).)..).)......).)..)...)
.((..(.(......(.((..((.(.....((.(..(......)..)))..).).).)..).)......).)..)...)
>AAHY01210291.1/5583-5504
UACGAUUAGUUUUGCAGAUUUGCAGUUCAGCGUAUAUGUGAAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGGG
................((........................................)..)..................
................((.....(.....(...................)..).....)..)..................
(.(.............((.....(.....(...................)..).....)..).............)...)
(.(.............((..((.(.....(...................)..).).).)..).............)...)
(.(.............((..((.(.....(.....(........)....)..).).).)..).............)...)
(.(..(.(........((..((.(.....(.....(........)....)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(.....(.....(........)....)..).).).)..).)......).)..)...)
(.(..(.(......(.((..((.(.....((.(..(........)..)))..).).).)..).)......).)..)...)
>AANG01459906.1/2349-2270
UACGGUUAGUUUUGCAGGUUUGCAUUUCAGCGGAUAUAUGUAUGUAUAGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
....................(..(..................................)..)..................
................((.....(.....(...................)..).....)..)..................
.((.............((.....(.....(...................)..).....)..).............)...)
.((.............((..((.(.....(...................)..).).).)..).............)...)
.((.............((..((.(.....(.....(........)....)..).).).)..).............)...)
.((..(.(........((..((.(.....(.....(........)....)..).).).)..)........).)..)...)
.((..(.(......(.((..((.(.....(.....(........)....)..).).).)..).)......).)..)...)
.((..(.(......(.((..((.(.....((.(..(........)..)))..).).).)..).)......).)..)...)
>ABDC01275774.1/2263-2184
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUAGGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
................((.....(.....(...................)..).....)..)..................
.((.............((.....(.....(...................)..).....)..).............)...)
.((.............((..((.(.....(...................)..).).).)..).............)...)
.((.............((..((.(.....(.....(........)....)..).).).)..).............)...)
.((..(.(........((..((.(.....(.....(........)....)..).).).)..)........).)..)...)
.((..(.(......(.((..((.(.....(.....(........)....)..).).).)..).)......).)..)...)
.((..(.(......(.((..((.(.....((.(..(........)..)))..).).).)..).)......).)..)...)
>AY866318.1/761-832
CUCUGUUAGUUUUGCAUAGUUGCACUACAGGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((................................)..)..................
................((.....((................)..).....)..)..................
(.(.............((.....((................)..).....)..).............)...)
(.(.............((..((.((................)..).).).)..).............)...)
(.(.............((..((.((......(......)..)..).).).)..).............)...)
(.(..(.(........((..((.((......(......)..)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(..(..(........)..)..).).).)..).)......).)..)...)
>AAWZ02030636.1/2841-2915
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUAAUGUGUUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
................((...................................)..)..................
................((.....(.(..................)..).....)..)..................
(.(.............((.....(.(..................)..).....)..).............)...)
(.(.............((..((.(.(..................)..).).).)..).............)...)
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
>AY866311.1/740-811
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGCAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((................................)..)..................
................((.....((................)..).....)..)..................
(.(.............((.....((................)..).....)..).............)...)
(.(.............((..((.((................)..).).).)..).............)...)
(.(.............((..((.((......(......)..)..).).).)..).............)...)
(.(..(.(........((..((.((......(......)..)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(..(..(........)..)..).).).)..).)......).)..)...)
>AY866362.1/494-567
CACGAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUAAGGCUGUGCAAAUCCAUGCAAAACUGAUCGUGAU
................((..................................)..)..................
................((.....((..................)..).....)..)..................
.((.............((.....((..................)..).....)..).............)...)
.((.............((..((.((..................)..).).).)..).............)...)
.((.............((..((.((.....(........)...)..).).).)..).............)...)
.((..(.(........((..((.((.....(........)...)..).).).)..)........).)..)...)
.((..(.(......(.((..((.((.....(........)...)..).).).)..).)......).)..)...)
>AAFR03020267.1/47295-47221
UAUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUAUUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGU
................((...................................)..)..................
................((.....(.(..................)..).....)..)..................
(.(.............((.....(.(..................)..).....)..).............)...)
(.(.............((..((.(.(..................)..).).).)..).............)...)
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
>CR390304.1/227-301
UCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUACUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGC
................((...................................)..)..................
................((.....(.(..................)..).....)..)..................
(.(.............((.....(.(..................)..).....)..).............)...)
(.(.............((..((.(.(..................)..).).).)..).............)...)
(.(.............((..((.(.(......(......)....)..).).).)..).............)...)
(.(..(.(........((..((.(.(......(......)....)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(.(......(......)....)..).).).)..).)......).)..)...)
>AAPN01226808.1/924-995
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGACGGUGGC
................((................................)..)..................
................((.....((................)..).....)..)..................
(.(.............((.....((................)..).....)..).............)...)
(.(.............((..((.((................)..).).).)..).............)...)
(.(.............((..((.((......(......)..)..).).).)..).............)...)
(.(..(.(........((..((.((......(......)..)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(..(..(........)..)..).).).)..).)......).)..)...)
>AF480554.1/6-77
CUCUGUUAGUUUUGCAUAGUUGCACUACAAGAAGAAUGUAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((................................)..)..................
................((.....((................)..).....)..)..................
(.(.............((.....((................)..).....)..).............)...)
(.(.............((..((.((................)..).).).)..).............)...)
(.(.............((..((.((......(......)..)..).).).)..).............)...)
(.(..(.(........((..((.((......(......)..)..).).).)..)........).)..)...)
(.(..(.(......(.((..((.(..(..(........)..)..).).).)..).)......).)..)...)
>AANH01005312.1/95619-95548
CUCCGUUAGUUUUGCAUAGUUGCGCUCCAAGAAGAAAUGCGUUGUGCAAAUCUAUGCAAAGCUAACGGUGGC
................((................................)..)..................
................((.....((................)..).....)..)..................
(.(.............((.....((................)..).....)..).............)...)
(.(.............((..((.((................)..).).).)..).............)...)
(.(.............((..((.((.....(........).)..).).).)..).............)...)
>AAPY01386199.1/1137-1058
UACAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
................((.....(.....(...................)..).....)..)..................
.((.............((.....(.....(...................)..).....)..).............)...)
.((.............((..((.(.....(...................)..).).).)..).............)...)
.((.............((..((.(.....(....(........).....)..).).).)..).............)...)
>AADA01312424.1/2142-2221
AGGAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUAAAGGGGUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
................((.....(.....(...................)..).....)..)..................
(.(.............((.....(.....(...................)..).....)..).............)...)
(.(.............((..((.(.....(...................)..).).).)..).............)...)
(.(.............((..((.(.....(....(.......)......)..).).).)..).............)...)
>CAAK05051440.1/16032-15961
CUCUGCUAGUUUUGCAUAGUUGCACUACAAGAAAUAUUGAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((................................)..)..................
................((.....((................)..).....)..)..................
(.(.............((.....((................)..).....)..).............)...)
(.(.............((..((.((................)..).).).)..).............)...)
(.(.............((..((.((.....(.....)....)..).).).)..).............)...)
>BAAF04019480.1/13763-13692
CUCUGUUAGUUUUGCAUAGUUGCACUGCAAGAAGAGAUGCGUUGUGCAAAUCUAUGCAAAGCUGAUAGUGGC
................((................................)..)..................
................((.....((................)..).....)..)..................
(.(.............((.....((................)..).....)..).............)...)
(.(.............((..((.((................)..).).).)..).............)...)
(.(.............((..((.((.....(........).)..).).).)..).............)...)
>AAIY01238597.1/3252-3175
UACGGUGAGUUUUGCAGGUUUGCAUUUCAGCAUGUAUGUAUCUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAG
................((......................................)..)..................
................((.....(....(..................)..).....)..)..................
(.(.............((.....(....(..................)..).....)..).............)...)
(.(.............((..((.(....(..................)..).).).)..).............)...)
>AALT01065661.1/586-507
CCCAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAAAUCUACAGGGCUGUGCAAAUCCAUGCAAAACUGACUGUGAU
................((........................................)..)..................
................((.....(.....(...................)..).....)..)..................
(.(.............((.....(.....(...................)..).....)..).............)...)
(.(.............((..((.(.....(...................)..).).).)..).............)...)
>AAGU03084137.1/1014-941
UACAGUUAGUUUUGCAGGUUUGCAUUGCAGUAUAUGUAUAUGGCUGUGCAAAUCCAUGCAAAACUGACGGUGAU
................((..................................)..)..................
................((.....(..(................)..).....)..)..................
(.(.............((.....(..(................)..).....)..).............)...)
(.(.............((..((.(..(................)..).).).)..).............)...)
>AAGW02046787.1/21646-21567
CACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACCUGUAUACAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
................((.....(.....(...................)..).....)..)..................
.((.............((.....(.....(...................)..).....)..).............)...)
.((.............((..((.(.....(...................)..).).).)..).............)...)
>AAKN02053349.1/40109-40028
UACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAGAUAUAUCUACAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((..........................................)..)..................
................((.....(.....(.....................)..).....)..)..................
>CAAB02000121.1/15413-15484
CUCUGCUAGUUUUGCAUAGUUGCACUACAAGAAUAGAGGAGUUGUGCAAAUCUAUGCAAAACUGAUGGUGGC
................((................................)..)..................
>AY866366.1/713-792
UACAGUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>AY866360.1/1064-1143
UACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUACAUGUAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>AF480556.1/2-81
UACAAUUAGUUUUGCAGGUUUGCAUUUCAGCGUAUAUAUGUAUAUGUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
................((........................................)..)..................
>CAAE01014781.1/2073487-2073558
CUCUGUCAGUUUUGCAUGGUUGCGCUGCAAGAAGAAAUAAGUUGUGCAAAUCUAUGCAAAACUGACAGCGGU
................((................................)..)..................

ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio
1 ((U)CY)A < 0.001 17.7
AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.........1.........2.........3.........4.........5.........6.........7......
1234567890123456789012345678901234567890123456789012345678901234567890123456
2 ((Y)UG)U < 0.001 11.4
AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.........1.........2.........3.........4.........5.........6.........7......
1234567890123456789012345678901234567890123456789012345678901234567890123456
3 (()UGR) < 0.001 13.6
AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.........1.........2.........3.........4.........5.........6.........7......
1234567890123456789012345678901234567890123456789012345678901234567890123456
4 ((C)A)A < 0.001 3.06
AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.........1.........2.........3.........4.........5.........6.........7......
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5 (.NNAUR.) < 0.001 9.13
AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.........1.........2.........3.........4.........5.........6.........7......
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6 U(U(A)) < 0.001 2.49
AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.........1.........2.........3.........4.........5.........6.........7......
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7 ((A)U)G < 0.001 2.47
AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.........1.........2.........3.........4.........5.........6.........7......
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8 C(N(N)) < 0.001 1.46
AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.........1.........2.........3.........4.........5.........6.........7......
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ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio

NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio
1 ((U)CY)A < 0.001 17.7
AAFC03125572.1/1362-1437
UACAGUUAGUUUUGCUGGUUUGCAUUUCAGCGUGUGGAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGAU
.........1.........2.........3.........4.........5.........6.........7......
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NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).