D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major
D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences
J. Mol. Biol., 435 (2023)

microRNA mir-340   (Rfam: RF00761)

Seed sequences
All NCMs (CSV file) (all) positive sequences (all) negative sequences (random) (training) positive sequences (training) negative sequences (testing) positive sequences (testing) negative sequences 

Options
Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN
Rfam
D-ORB
Augmented
(.NU.().YU.)
(.NU.().NU.)
U(RYN)N
U(RN(A))
93.5
100.0
93.5
96.8
U(RYN)N

% of positive sequence with ORB





Deep neural network:

5-fold cross-validation: 99.6 %
(± 0.099 %)
Decision tree:

5-fold cross-validation: 80.7 %
(± 6.32 %)
D-ORB structure
D-ORB structure decision tree:

5-fold cross-validation: 89.6 %
(± 3.29 %)
of AAGU03047370.1/11364-11460
AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
.((((..(((((((((((((..(..(((((((((((...((((((...))((..))))))..))))))))))))....)))))))))))))..))))
.........1.........2.........3.........4.........5.........6.........7.........8.........9.......
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567

abstract shape: ()

Number of sequences
Structure ORBs (out of 31) (%)
1 (.NU.().YU.)
 27 87.1
>AACN010226306.1/818-721
UCUUUGUACCUGAUGCGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUCGGUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCGUGCCUGGUACCUAA
..(..(.......................................................................................)..).
>AAIY01703130.1/1510-1607
CGCUUGUAUCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUAGCUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
.(....(.....................................................................................)...).
>AALT01005382.1/1156-1059
AAAAAAUACAUGGCAUGACUAUAAAGUAAUGAGACAAGUUUUCAUGUGUGGCUUGUGUUACUGAGUCUCAUUAGUAUAUAGUCACAUCCUGUCUCAAG
........(..(...........................................................................)..).......
>ABDC01266727.1/454-548
UUUAAGGAAGAGGUGUGACUAUAAAGCAGUGAGACUGAUGUGGGGUGUGCAGCUUCUGGAAUCAGUCUCAUUACUUUCUACUCUCACCUCUGAGA
...................(..(.....................................................)..)...............
>AAQR03004710.1/72078-71984
UUUAAGGAAGAGGUGUGAUUAUAAAGCAGUGAGACUGAUUUGGGGUGUGCAGCUUCUGGAAUCAGUCUCAUUACUUUCUACUCUCACCUCUGAGA
................(..(...........................................................)..)............
>AANG01281249.1/484-388
AUGAAAAAUGAGAUGUGACUAUAAAGUGAUGAAACUGAUUUUCACAUGUGGCCUGUGGGAUUUCCUUGAUUACUUUUUAGUCAUGCCUUGUAUUAGU
...................(..(....................................................)..)..................
>AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
....(..(..................................................................................)..)...
>AAFR03025629.1/19404-19498
GGUGUAUCUAUGGUAUGACUAUAAAGCAAUGAUACUGAUUCUCCAUUUGGGUUAUGGAAAUCAGUCUCAUUACCUUAUAGUUGCACUGGGUCUUC
.......(...(........................................................................)..).......
>AAFR03008051.1/35072-34981
AUAUCAUACGAGGUGUGACUAUAACAUAAUGAGAUUGAUUUUCAUGUGUGACUUUUGGAAUCAAUCUCAUUAUAGAAAUGCCUUAUGUCAUA
.....................(.......(......................................)..)....................
>AAFR03033110.1/48153-48249
UUAAUGUAUGAGGUGUGACAAUAAGGUAACGAUACUGAUUUCCAUGUUAGUCUGGUGGAAUUAGCCUCAUUACUCUAUAGUCACACCUUAUAAAUUC
..............................(..(..............................)..).............................
>AAPY01204703.1/899-994
AAAAAAUACAUGGCAUGACUAUAAAGUAAUGAGACAAAUUUUCAUGUGUAGCUUGGAUUACUGUCUCAUUAGUAUAUAGUCACAUCCUGUCUUGAG
........(..(.........................................................................)..).......
>AC200335.2/106893-106989
AAUUUAUACAAGGCAUGACUGUAAUAUAAUGAAUCUGAUUUUUCUGUGUGACUUGUGGAAUCAAACCUAUUUCUAUAUAAUCACAUCUUGUAUAUUA
.(..(........................................................................................)..)
>AAFR03044565.1/87831-87735
CUUCAGCAUGAGGUGUGAUUACAAAGGAAUGAAACUGUUUUUCUUAUGUGGUUUGUGGAAUUGGUUCUGUUACUUUGUAGUUAUAUAUCAUAGAUCU
..........................(...(...................................)....).........................
>AAKN02055594.1/55874-55971
CACUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUUUGUCUUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAGACCUGGUAUCUUA
.(....(.....................................................................................)...).
>AAWR02006601.1/58623-58527
GACUUGAAUAUAGUAUGAUUAUGAAAUAAUAAGACUAAUUUUGACAUGUGGUUUAUGUAAUUGGUUUCAUUACUUGAUAGCCACACUUGAGACUUUA
..(...(....................................................................................)..)..
>AC069137.6/16222-16127
GGCUAGAAUACAGUAUGAUUGUGAAGUAAUAAGACUAAUUUUGACAUGUGGUUUGUGGAAUUGGUUUCAUUACUUAUAGUCACAUUUGAGGCUUUA
.(...(.....................................................................................)..).
>AC169700.1/140375-140471
AAUUUAUACAAGGCAUGACUGUAAUAUAAUGAAUCUGAUUUUUCUGUGUGACUUGUGGAAUCAAUCCUAUUUCUUUAUAAUCACAUCUUGUAUAUUA
.(..(........................................................................................)..)
>AAFR03024491.1/9819-9913
UGAUCAAGGUGUGACUAUAAAGUAAUGAGAUUGAUUUCUGUGGUAUAGUAAAUGGAAAUCAGUUUCAUUACCUUACAGUCACAUCUAAUCUUCUA
.(....(..............................................................................)......)..
>AC018356.26/45515-45611
AGGGAAUAUGAGAUGUGACUAUAACGUGAUGAAACUGAUUGUCACAUGUGGCUUGUGGGAUUUCUCAGAUUACUUUUUAGUCAUGUUUUGUAUUAGU
...................(..(....................................................)..)..................
>AAHX01063758.1/23051-23148
CACUUGUACUCGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUCGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
.(....(.....................................................................................)...).
>AC158769.2/163667-163764
AAAACAUACAUGGCAUGGCUAUAAAGUAAUGAGACAAGUUUUCAUGUGUGGCUUGGUUUAUUGAGUCUCAUUAAUAUAUAGUCAUAUCCUGUCUCAAG
........(..(...........................................................................)..).......
>AANN01309615.1/1178-1081
AAAACAUACAUGGCAUGACUAUAAAGUAAUGAGACAAGUUUUUCACAUCUGGCUGUGUUACUGAGUCUCAUUAGUGUAUAGUCAAAUCCCGUCUCAAG
...(...(...................................................................................)...)..
>AC026413.5/105797-105700
CGUUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUAUGUCGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
..(...(.....................................................................................)...).
>AAWR02011473.1/193267-193171
AGGAAAUAUGAGGUGUGACUAUCAAGGGAUGAAACUGAUUUUCCCAUGUGGCUUGUGGGAUUUCCUGGAUUACUUUUUAGUCAUGCCUUAUAUUAGU
...................(..(....................................................)..)..................
>AAFC03080208.1/50415-50512
AAAACAUACAUGGCAUGACUAUAAAGUAAUGAGACGAGUUUUCAUAUGCGGCUUGUAUUACUGAGUCUCAUUAAUAUAUAGUCACAUCCUGUUUCGAG
........(..(...........................................................................)..).......
>AAGW02065628.1/38933-38836
CAUUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUAUGUUGUUCAUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUACCUUG
.(...(.......................................................................................)..).
>AAQQ01168328.1/1653-1750
UUUAAGGAAGAGGUAUGAGUAUAAAGCAGUGAGACUGAUUUGAGAUGUGCAGCUGCUGGAAUCAGUUUCGUUACUUUCUACUCUCACCUCUGAGACAG
.............(...(...............................................................)...)............
2 (.NU.().YU.)
(.NU.().NU.)
 23 74.2
>AAFR03044565.1/87831-87735
CUUCAGCAUGAGGUGUGAUUACAAAGGAAUGAAACUGUUUUUCUUAUGUGGUUUGUGGAAUUGGUUCUGUUACUUUGUAGUUAUAUAUCAUAGAUCU
..........................(...(...........(..(.....)..)...........)....).........................
>AAFR03008051.1/35072-34981
AUAUCAUACGAGGUGUGACUAUAACAUAAUGAGAUUGAUUUUCAUGUGUGACUUUUGGAAUCAAUCUCAUUAUAGAAAUGCCUUAUGUCAUA
.....................(.......(............(..(.......)..)...........)..)....................
>AAFR03025629.1/19404-19498
GGUGUAUCUAUGGUAUGACUAUAAAGCAAUGAUACUGAUUCUCCAUUUGGGUUAUGGAAAUCAGUCUCAUUACCUUAUAGUUGCACUGGGUCUUC
.(...(........................(..(..............................)..)......................)..).
>ABDC01266727.1/454-548
UUUAAGGAAGAGGUGUGACUAUAAAGCAGUGAGACUGAUGUGGGGUGUGCAGCUUCUGGAAUCAGUCUCAUUACUUUCUACUCUCACCUCUGAGA
...................(..(...............(..(............).....)...............)..)...............
>AAQR03004710.1/72078-71984
UUUAAGGAAGAGGUGUGAUUAUAAAGCAGUGAGACUGAUUUGGGGUGUGCAGCUUCUGGAAUCAGUCUCAUUACUUUCUACUCUCACCUCUGAGA
...................(..(....................(..(.....)..)....................)..)...............
>AAFR03024491.1/9819-9913
UGAUCAAGGUGUGACUAUAAAGUAAUGAGAUUGAUUUCUGUGGUAUAGUAAAUGGAAAUCAGUUUCAUUACCUUACAGUCACAUCUAAUCUUCUA
.(..(.......................(..(............................)..).......................)....)..
>AC026413.5/105797-105700
CGUUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUAUGUCGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
.(..(......................(..(....................................)...)......................)..)
>AAWR02006601.1/58623-58527
GACUUGAAUAUAGUAUGAUUAUGAAAUAAUAAGACUAAUUUUGACAUGUGGUUUAUGUAAUUGGUUUCAUUACUUGAUAGCCACACUUGAGACUUUA
.(...(................................(..(............)....)................................)..).
>AC018356.26/45515-45611
AGGGAAUAUGAGAUGUGACUAUAACGUGAUGAAACUGAUUGUCACAUGUGGCUUGUGGGAUUUCUCAGAUUACUUUUUAGUCAUGUUUUGUAUUAGU
...................(..(..............(..(..........)..)....................)..)..................
>AAFR03033110.1/48153-48249
UUAAUGUAUGAGGUGUGACAAUAAGGUAACGAUACUGAUUUCCAUGUUAGUCUGGUGGAAUUAGCCUCAUUACUCUAUAGUCACACCUUAUAAAUUC
..............................(..(........(..(....)..)..........)..).............................
>AAPY01204703.1/899-994
AAAAAAUACAUGGCAUGACUAUAAAGUAAUGAGACAAAUUUUCAUGUGUAGCUUGGAUUACUGUCUCAUUAGUAUAUAGUCACAUCCUGUCUUGAG
........(..(......................(....(.................)....)......................)..).......
>AC069137.6/16222-16127
GGCUAGAAUACAGUAUGAUUGUGAAGUAAUAAGACUAAUUUUGACAUGUGGUUUGUGGAAUUGGUUUCAUUACUUAUAGUCACAUUUGAGGCUUUA
.(..(..................................(..(.........).....).................................)..)
>AANN01309615.1/1178-1081
AAAACAUACAUGGCAUGACUAUAAAGUAAUGAGACAAGUUUUUCACAUCUGGCUGUGUUACUGAGUCUCAUUAGUGUAUAGUCAAAUCCCGUCUCAAG
...(...(...........................(....(..................)...)...........................)...)..
>AAFC03080208.1/50415-50512
AAAACAUACAUGGCAUGACUAUAAAGUAAUGAGACGAGUUUUCAUAUGCGGCUUGUAUUACUGAGUCUCAUUAAUAUAUAGUCACAUCCUGUUUCGAG
....(..(..............................(...(.............)..)...............................)...)..
>AAWR02011473.1/193267-193171
AGGAAAUAUGAGGUGUGACUAUCAAGGGAUGAAACUGAUUUUCCCAUGUGGCUUGUGGGAUUUCCUGGAUUACUUUUUAGUCAUGCCUUAUAUUAGU
...................(..(...............(..(.................)..)............)..)..................
>AC169700.1/140375-140471
AAUUUAUACAAGGCAUGACUGUAAUAUAAUGAAUCUGAUUUUUCUGUGUGACUUGUGGAAUCAAUCCUAUUUCUUUAUAAUCACAUCUUGUAUAUUA
.(..(.........................(....(..........................)....).........................)..)
>AACN010226306.1/818-721
UCUUUGUACCUGAUGCGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUCGGUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCGUGCCUGGUACCUAA
..(..(.................................(...(.........)....)..................................)..).
>AC200335.2/106893-106989
AAUUUAUACAAGGCAUGACUGUAAUAUAAUGAAUCUGAUUUUUCUGUGUGACUUGUGGAAUCAAACCUAUUUCUAUAUAAUCACAUCUUGUAUAUUA
.(..(...................(..(..........................................)...)..................)..)
>AAQQ01168328.1/1653-1750
UUUAAGGAAGAGGUAUGAGUAUAAAGCAGUGAGACUGAUUUGAGAUGUGCAGCUGCUGGAAUCAGUUUCGUUACUUUCUACUCUCACCUCUGAGACAG
.............(...(....................(..(............).....)....................)...)............
>AC158769.2/163667-163764
AAAACAUACAUGGCAUGGCUAUAAAGUAAUGAGACAAGUUUUCAUGUGUGGCUUGGUUUAUUGAGUCUCAUUAAUAUAUAGUCAUAUCCUGUCUCAAG
........(..(.......................(...(.................).....).......................)..).......
>AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
....(..(...........................(...(...................)..)...........................)..)...
>AANG01281249.1/484-388
AUGAAAAAUGAGAUGUGACUAUAAAGUGAUGAAACUGAUUUUCACAUGUGGCCUGUGGGAUUUCCUUGAUUACUUUUUAGUCAUGCCUUGUAUUAGU
...................(..(..............(..(.................)..).............)..)..................
>AAIY01703130.1/1510-1607
CGCUUGUAUCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUAGCUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
.(..(......................(..(....................................)...)......................)..)
3 (.NU.().YU.)
(.NU.().NU.)
U(RYN)N
 19 61.3
>AAQR03004710.1/72078-71984
UUUAAGGAAGAGGUGUGAUUAUAAAGCAGUGAGACUGAUUUGGGGUGUGCAGCUUCUGGAAUCAGUCUCAUUACUUUCUACUCUCACCUCUGAGA
...................(..(....................(..((...))..)....................)..)...............
>AAPY01204703.1/899-994
AAAAAAUACAUGGCAUGACUAUAAAGUAAUGAGACAAAUUUUCAUGUGUAGCUUGGAUUACUGUCUCAUUAGUAUAUAGUCACAUCCUGUCUUGAG
........(..(......................(....(......(...)......)....)......................)..).......
>AC158769.2/163667-163764
AAAACAUACAUGGCAUGGCUAUAAAGUAAUGAGACAAGUUUUCAUGUGUGGCUUGGUUUAUUGAGUCUCAUUAAUAUAUAGUCAUAUCCUGUCUCAAG
........(..(.......................(...(......(...)......).....).......................)..).......
>AAWR02011473.1/193267-193171
AGGAAAUAUGAGGUGUGACUAUCAAGGGAUGAAACUGAUUUUCCCAUGUGGCUUGUGGGAUUUCCUGGAUUACUUUUUAGUCAUGCCUUAUAUUAGU
...................(..(...............(..(....(...)........)..)............)..)..................
>AACN010226306.1/818-721
UCUUUGUACCUGAUGCGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUCGGUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCGUGCCUGGUACCUAA
..(..(.................................(...(..(...)..)....)..................................)..).
>AAIY01703130.1/1510-1607
CGCUUGUAUCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUAGCUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
.(..(......................(..(...............(...)................)...)......................)..)
>AAFR03024491.1/9819-9913
UGAUCAAGGUGUGACUAUAAAGUAAUGAGAUUGAUUUCUGUGGUAUAGUAAAUGGAAAUCAGUUUCAUUACCUUACAGUCACAUCUAAUCUUCUA
.(..(.......................(..(...........(...)............)..).......................)....)..
>ABDC01266727.1/454-548
UUUAAGGAAGAGGUGUGACUAUAAAGCAGUGAGACUGAUGUGGGGUGUGCAGCUUCUGGAAUCAGUCUCAUUACUUUCUACUCUCACCUCUGAGA
...................(..(...............(..(...(...)....).....)...............)..)...............
>AC069137.6/16222-16127
GGCUAGAAUACAGUAUGAUUGUGAAGUAAUAAGACUAAUUUUGACAUGUGGUUUGUGGAAUUGGUUUCAUUACUUAUAGUCACAUUUGAGGCUUUA
.(..(..................................(..(...(...).).....).................................)..)
>AC026413.5/105797-105700
CGUUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUAUGUCGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
.(..(......................(..(...............(...)................)...)......................)..)
>AAFR03044565.1/87831-87735
CUUCAGCAUGAGGUGUGAUUACAAAGGAAUGAAACUGUUUUUCUUAUGUGGUUUGUGGAAUUGGUUCUGUUACUUUGUAGUUAUAUAUCAUAGAUCU
..........................(...(...........(..((...))..)...........)....).........................
>AC018356.26/45515-45611
AGGGAAUAUGAGAUGUGACUAUAACGUGAUGAAACUGAUUGUCACAUGUGGCUUGUGGGAUUUCUCAGAUUACUUUUUAGUCAUGUUUUGUAUUAGU
...................(..(..............(..(.....(...).........)...)..........)..)..................
>AAFC03080208.1/50415-50512
AAAACAUACAUGGCAUGACUAUAAAGUAAUGAGACGAGUUUUCAUAUGCGGCUUGUAUUACUGAGUCUCAUUAAUAUAUAGUCACAUCCUGUUUCGAG
....(..(..............................(...(...(...).....)..)...............................)...)..
>AC169700.1/140375-140471
AAUUUAUACAAGGCAUGACUGUAAUAUAAUGAAUCUGAUUUUUCUGUGUGACUUGUGGAAUCAAUCCUAUUUCUUUAUAAUCACAUCUUGUAUAUUA
.(..(.........................(....(..........(...)...........)....).........................)..)
>AAWR02006601.1/58623-58527
GACUUGAAUAUAGUAUGAUUAUGAAAUAAUAAGACUAAUUUUGACAUGUGGUUUAUGUAAUUGGUUUCAUUACUUGAUAGCCACACUUGAGACUUUA
.(...(................................(..(....(...)...)....)................................)..).
>AANG01281249.1/484-388
AUGAAAAAUGAGAUGUGACUAUAAAGUGAUGAAACUGAUUUUCACAUGUGGCCUGUGGGAUUUCCUUGAUUACUUUUUAGUCAUGCCUUGUAUUAGU
...................(..(..............(..(.....(...).......)..).............)..)..................
>AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
....(..(...........................(...(....(...)..........)..)...........................)..)...
>AAQQ01168328.1/1653-1750
UUUAAGGAAGAGGUAUGAGUAUAAAGCAGUGAGACUGAUUUGAGAUGUGCAGCUGCUGGAAUCAGUUUCGUUACUUUCUACUCUCACCUCUGAGACAG
.............(...(....................(..(.....(...)..).....)....................)...)............
>AAFR03008051.1/35072-34981
AUAUCAUACGAGGUGUGACUAUAACAUAAUGAGAUUGAUUUUCAUGUGUGACUUUUGGAAUCAAUCUCAUUAUAGAAAUGCCUUAUGUCAUA
.....................(.......(............(..((...)..)..)...........)..)....................
4 (.NU.().YU.)
(.NU.().NU.)
U(RYN)N
U(RN(A))
 12 38.7
>AAPY01204703.1/899-994
AAAAAAUACAUGGCAUGACUAUAAAGUAAUGAGACAAAUUUUCAUGUGUAGCUUGGAUUACUGUCUCAUUAGUAUAUAGUCACAUCCUGUCUUGAG
........(..(.........(..(.........(....(......(...)......)....).........)..).........)..).......
>AACN010226306.1/818-721
UCUUUGUACCUGAUGCGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUCGGUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCGUGCCUGGUACCUAA
..(..(.............(..(................(...(..(...)..)....).................)..).............)..).
>AC018356.26/45515-45611
AGGGAAUAUGAGAUGUGACUAUAACGUGAUGAAACUGAUUGUCACAUGUGGCUUGUGGGAUUUCUCAGAUUACUUUUUAGUCAUGUUUUGUAUUAGU
...................(..(......(..(....(..(.....(...).........)...)..))......)..)..................
>AAIY01703130.1/1510-1607
CGCUUGUAUCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUAGCUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
.(..(..............(..(....(..(...............(...)................)...)....)..)..............)..)
>AAQQ01168328.1/1653-1750
UUUAAGGAAGAGGUAUGAGUAUAAAGCAGUGAGACUGAUUUGAGAUGUGCAGCUGCUGGAAUCAGUUUCGUUACUUUCUACUCUCACCUCUGAGACAG
.............(...(...(..(.............(..(.....(...)..).....).............)..)...)...)............
>AAFR03024491.1/9819-9913
UGAUCAAGGUGUGACUAUAAAGUAAUGAGAUUGAUUUCUGUGGUAUAGUAAAUGGAAAUCAGUUUCAUUACCUUACAGUCACAUCUAAUCUUCUA
.(..(..........(..(.........(..(...........(...)............)..).........)..)..........)....)..
>AC026413.5/105797-105700
CGUUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUAUGUCGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
.(..(..............(..(....(..(...............(...)................)...)....)..)..............)..)
>AC069137.6/16222-16127
GGCUAGAAUACAGUAUGAUUGUGAAGUAAUAAGACUAAUUUUGACAUGUGGUUUGUGGAAUUGGUUUCAUUACUUAUAGUCACAUUUGAGGCUUUA
.(..(................(..(..............(..(...(...).).....)..............).)................)..)
>AC158769.2/163667-163764
AAAACAUACAUGGCAUGGCUAUAAAGUAAUGAGACAAGUUUUCAUGUGUGGCUUGGUUUAUUGAGUCUCAUUAAUAUAUAGUCAUAUCCUGUCUCAAG
........(..(.........(..(..........(...(......(...)......).....)..........)..).........)..).......
>AC169700.1/140375-140471
AAUUUAUACAAGGCAUGACUGUAAUAUAAUGAAUCUGAUUUUUCUGUGUGACUUGUGGAAUCAAUCCUAUUUCUUUAUAAUCACAUCUUGUAUAUUA
.(..(..............(..(.......(....(..........(...)...........)....).......)..)..............)..)
>AAWR02011473.1/193267-193171
AGGAAAUAUGAGGUGUGACUAUCAAGGGAUGAAACUGAUUUUCCCAUGUGGCUUGUGGGAUUUCCUGGAUUACUUUUUAGUCAUGCCUUAUAUUAGU
...................(..(......(..(.....(..(....(...)........)..)....))......)..)..................
>AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
....(..(.............(..(..........(...(....(...)..........)..)..........)...)............)..)...

>AACN010226306.1/818-721
UCUUUGUACCUGAUGCGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUCGGUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCGUGCCUGGUACCUAA
..(..(.......................................................................................)..).
..(..(.................................(...(.........)....)..................................)..).
..(..(.................................(...(..(...)..)....)..................................)..).
..(..(.............(..(................(...(..(...)..)....).................)..).............)..).
>AAIY01703130.1/1510-1607
CGCUUGUAUCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUAGCUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
.(....(.....................................................................................)...).
.(..(......................(..(....................................)...)......................)..)
.(..(......................(..(...............(...)................)...)......................)..)
.(..(..............(..(....(..(...............(...)................)...)....)..)..............)..)
>AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
....(..(..................................................................................)..)...
....(..(...........................(...(...................)..)...........................)..)...
....(..(...........................(...(....(...)..........)..)...........................)..)...
....(..(.............(..(..........(...(....(...)..........)..)..........)...)............)..)...
>AAPY01204703.1/899-994
AAAAAAUACAUGGCAUGACUAUAAAGUAAUGAGACAAAUUUUCAUGUGUAGCUUGGAUUACUGUCUCAUUAGUAUAUAGUCACAUCCUGUCUUGAG
........(..(.........................................................................)..).......
........(..(......................(....(.................)....)......................)..).......
........(..(......................(....(......(...)......)....)......................)..).......
........(..(.........(..(.........(....(......(...)......)....).........)..).........)..).......
>AC069137.6/16222-16127
GGCUAGAAUACAGUAUGAUUGUGAAGUAAUAAGACUAAUUUUGACAUGUGGUUUGUGGAAUUGGUUUCAUUACUUAUAGUCACAUUUGAGGCUUUA
.(...(.....................................................................................)..).
.(..(..................................(..(.........).....).................................)..)
.(..(..................................(..(...(...).).....).................................)..)
.(..(................(..(..............(..(...(...).).....)..............).)................)..)
>AC169700.1/140375-140471
AAUUUAUACAAGGCAUGACUGUAAUAUAAUGAAUCUGAUUUUUCUGUGUGACUUGUGGAAUCAAUCCUAUUUCUUUAUAAUCACAUCUUGUAUAUUA
.(..(........................................................................................)..)
.(..(.........................(....(..........................)....).........................)..)
.(..(.........................(....(..........(...)...........)....).........................)..)
.(..(..............(..(.......(....(..........(...)...........)....).......)..)..............)..)
>AAFR03024491.1/9819-9913
UGAUCAAGGUGUGACUAUAAAGUAAUGAGAUUGAUUUCUGUGGUAUAGUAAAUGGAAAUCAGUUUCAUUACCUUACAGUCACAUCUAAUCUUCUA
.(....(..............................................................................)......)..
.(..(.......................(..(............................)..).......................)....)..
.(..(.......................(..(...........(...)............)..).......................)....)..
.(..(..........(..(.........(..(...........(...)............)..).........)..)..........)....)..
>AC018356.26/45515-45611
AGGGAAUAUGAGAUGUGACUAUAACGUGAUGAAACUGAUUGUCACAUGUGGCUUGUGGGAUUUCUCAGAUUACUUUUUAGUCAUGUUUUGUAUUAGU
...................(..(....................................................)..)..................
...................(..(..............(..(..........)..)....................)..)..................
...................(..(..............(..(.....(...).........)...)..........)..)..................
...................(..(......(..(....(..(.....(...).........)...)..))......)..)..................
>AC158769.2/163667-163764
AAAACAUACAUGGCAUGGCUAUAAAGUAAUGAGACAAGUUUUCAUGUGUGGCUUGGUUUAUUGAGUCUCAUUAAUAUAUAGUCAUAUCCUGUCUCAAG
........(..(...........................................................................)..).......
........(..(.......................(...(.................).....).......................)..).......
........(..(.......................(...(......(...)......).....).......................)..).......
........(..(.........(..(..........(...(......(...)......).....)..........)..).........)..).......
>AC026413.5/105797-105700
CGUUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUAUGUCGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
..(...(.....................................................................................)...).
.(..(......................(..(....................................)...)......................)..)
.(..(......................(..(...............(...)................)...)......................)..)
.(..(..............(..(....(..(...............(...)................)...)....)..)..............)..)
>AAWR02011473.1/193267-193171
AGGAAAUAUGAGGUGUGACUAUCAAGGGAUGAAACUGAUUUUCCCAUGUGGCUUGUGGGAUUUCCUGGAUUACUUUUUAGUCAUGCCUUAUAUUAGU
...................(..(....................................................)..)..................
...................(..(...............(..(.................)..)............)..)..................
...................(..(...............(..(....(...)........)..)............)..)..................
...................(..(......(..(.....(..(....(...)........)..)....))......)..)..................
>AAQQ01168328.1/1653-1750
UUUAAGGAAGAGGUAUGAGUAUAAAGCAGUGAGACUGAUUUGAGAUGUGCAGCUGCUGGAAUCAGUUUCGUUACUUUCUACUCUCACCUCUGAGACAG
.............(...(...............................................................)...)............
.............(...(....................(..(............).....)....................)...)............
.............(...(....................(..(.....(...)..).....)....................)...)............
.............(...(...(..(.............(..(.....(...)..).....).............)..)...)...)............
>ABDC01266727.1/454-548
UUUAAGGAAGAGGUGUGACUAUAAAGCAGUGAGACUGAUGUGGGGUGUGCAGCUUCUGGAAUCAGUCUCAUUACUUUCUACUCUCACCUCUGAGA
...................(..(.....................................................)..)...............
...................(..(...............(..(............).....)...............)..)...............
...................(..(...............(..(...(...)....).....)...............)..)...............
>AAQR03004710.1/72078-71984
UUUAAGGAAGAGGUGUGAUUAUAAAGCAGUGAGACUGAUUUGGGGUGUGCAGCUUCUGGAAUCAGUCUCAUUACUUUCUACUCUCACCUCUGAGA
................(..(...........................................................)..)............
...................(..(....................(..(.....)..)....................)..)...............
...................(..(....................(..((...))..)....................)..)...............
>AANG01281249.1/484-388
AUGAAAAAUGAGAUGUGACUAUAAAGUGAUGAAACUGAUUUUCACAUGUGGCCUGUGGGAUUUCCUUGAUUACUUUUUAGUCAUGCCUUGUAUUAGU
...................(..(....................................................)..)..................
...................(..(..............(..(.................)..).............)..)..................
...................(..(..............(..(.....(...).......)..).............)..)..................
>AAFR03008051.1/35072-34981
AUAUCAUACGAGGUGUGACUAUAACAUAAUGAGAUUGAUUUUCAUGUGUGACUUUUGGAAUCAAUCUCAUUAUAGAAAUGCCUUAUGUCAUA
.....................(.......(......................................)..)....................
.....................(.......(............(..(.......)..)...........)..)....................
.....................(.......(............(..((...)..)..)...........)..)....................
>AAFR03044565.1/87831-87735
CUUCAGCAUGAGGUGUGAUUACAAAGGAAUGAAACUGUUUUUCUUAUGUGGUUUGUGGAAUUGGUUCUGUUACUUUGUAGUUAUAUAUCAUAGAUCU
..........................(...(...................................)....).........................
..........................(...(...........(..(.....)..)...........)....).........................
..........................(...(...........(..((...))..)...........)....).........................
>AAWR02006601.1/58623-58527
GACUUGAAUAUAGUAUGAUUAUGAAAUAAUAAGACUAAUUUUGACAUGUGGUUUAUGUAAUUGGUUUCAUUACUUGAUAGCCACACUUGAGACUUUA
..(...(....................................................................................)..)..
.(...(................................(..(............)....)................................)..).
.(...(................................(..(....(...)...)....)................................)..).
>AAFC03080208.1/50415-50512
AAAACAUACAUGGCAUGACUAUAAAGUAAUGAGACGAGUUUUCAUAUGCGGCUUGUAUUACUGAGUCUCAUUAAUAUAUAGUCACAUCCUGUUUCGAG
........(..(...........................................................................)..).......
....(..(..............................(...(.............)..)...............................)...)..
....(..(..............................(...(...(...).....)..)...............................)...)..
>AAFR03025629.1/19404-19498
GGUGUAUCUAUGGUAUGACUAUAAAGCAAUGAUACUGAUUCUCCAUUUGGGUUAUGGAAAUCAGUCUCAUUACCUUAUAGUUGCACUGGGUCUUC
.......(...(........................................................................)..).......
.(...(........................(..(..............................)..)......................)..).
>AAFR03033110.1/48153-48249
UUAAUGUAUGAGGUGUGACAAUAAGGUAACGAUACUGAUUUCCAUGUUAGUCUGGUGGAAUUAGCCUCAUUACUCUAUAGUCACACCUUAUAAAUUC
..............................(..(..............................)..).............................
..............................(..(........(..(....)..)..........)..).............................
>AC200335.2/106893-106989
AAUUUAUACAAGGCAUGACUGUAAUAUAAUGAAUCUGAUUUUUCUGUGUGACUUGUGGAAUCAAACCUAUUUCUAUAUAAUCACAUCUUGUAUAUUA
.(..(........................................................................................)..)
.(..(...................(..(..........................................)...)..................)..)
>AANN01309615.1/1178-1081
AAAACAUACAUGGCAUGACUAUAAAGUAAUGAGACAAGUUUUUCACAUCUGGCUGUGUUACUGAGUCUCAUUAGUGUAUAGUCAAAUCCCGUCUCAAG
...(...(...................................................................................)...)..
...(...(...........................(....(..................)...)...........................)...)..
>AALT01005382.1/1156-1059
AAAAAAUACAUGGCAUGACUAUAAAGUAAUGAGACAAGUUUUCAUGUGUGGCUUGUGUUACUGAGUCUCAUUAGUAUAUAGUCACAUCCUGUCUCAAG
........(..(...........................................................................)..).......
>AAKN02055594.1/55874-55971
CACUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUUUGUCUUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAGACCUGGUAUCUUA
.(....(.....................................................................................)...).
>AAHX01063758.1/23051-23148
CACUUGUACUCGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUCGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
.(....(.....................................................................................)...).
>AAGW02065628.1/38933-38836
CAUUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUAUGUUGUUCAUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUACCUUG
.(...(.......................................................................................)..).

ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio
1 (.NU.().YU.) < 0.001 3.52
AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
.........1.........2.........3.........4.........5.........6.........7.........8.........9.......
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
2 (.NU.().NU.) < 0.001 2.93
AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
.........1.........2.........3.........4.........5.........6.........7.........8.........9.......
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
3 U(RYN)N < 0.001 8.46
AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
.........1.........2.........3.........4.........5.........6.........7.........8.........9.......
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
4 U(RN(A)) < 0.001 1.25
AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
.........1.........2.........3.........4.........5.........6.........7.........8.........9.......
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio

NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio
1 (.NU.().NU.) < 0.001 2.93
AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
.........1.........2.........3.........4.........5.........6.........7.........8.........9.......
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
2 .N. < 0.001 1.09
AAGU03047370.1/11364-11460
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
AAAAUAUAUAAGGUAUGAAUAUAAAGUAAUGAGAUGAUUUUCCUUACGUAGUUUAUGGAAAUAGUCUCGUUAUUUCCCAGUUAUACCUUAUCUAUUU
.........1.........2.........3.........4.........5.........6.........7.........8.........9.......
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NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).