Options
Negatives sequences: Random sequences of similar lengths ORBs positions sequence: Best consensus structure-matching sequence Motifs: 162,498 motifs on the alphabet ACGURYN
% of positive sequence with ORB
(()())| Number of sequences | ||||||
|---|---|---|---|---|---|---|
| Structure | ORBs | (out of 11) | (%) | |||
| 1 |
|
(()().UUR.) |
().UUR.).svg)
|
10 | 90.9 | |
|
>U17009.2/4176-4248
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUAAAUUUAAUAAGGGAAUAAUAAAAGAAUUGACAUUUA ......((........)(............................................)...)......
>DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA ......((........)(.............................................)...)......
>DQ162901.1/38-112
AAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUGUAAAUUAAUAGGGAAUAAUAAUAGAAUUGACAUUUA ......((........)(..............................................)...)......
>FR834720.1/91-162
UUUACGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUUAUUAAUAGGGAAUAAUAAUAGAAUUGACGUAAA ......((........)(...........................................)...)......
>DQ832717.1/4170-4246
UAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAAAUAAAUUAAAUUAUAAGGGAAUAAAAUUAGAAUUGACAUUUA ......((........)(..............................................).....)......
>ABWE01000061.1/86410-86482
AAAAUGGACCCAUAGGCAGUUUUUGGUAUUUCCUUUUUAAUAUUAAUGGGAAUAAUAAUAGUGUUGACAUUUU ......((.......)(.............................................)...)......
>GU138663.1/42360-42281
AAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUAUAAACUAAUUAAUACGGGAAUAAUUAUAUAAGAAUUGACAUUUU ......((........).(...............................................)......)......
>DQ162897.1/47-122
UAAAUGGACCCAGAGGCAGUUUUUGGUAUUUCCAUAUAAAUUAAAUGACUGGGGAUAAUAAUAGAAUUGACAUUUA ......((........)(...............................................)...)......
>EU427478.1/141-218
UAAAUGAACCCAAAGGCAGUAUUUGGUAUUUCCAUUUAUUUAUAUUAAAAUAGGGGAUAAUAUUAGAAUUGACAUUUA ......((........)...(..............................................)...)......
>AF007261.1/62923-63007
ACUAUGGAACCGAGGGCGGAUCUCGGCAUCUCCAUAAAAAUGUUUGAUAACAUUUUUUGGGGAUGUUUUUAGUAUUCGACAUAGU ..........((...........)(..........................................)...)............. |
||||||
| 2 |
|
(()().UUR.) ((A)UA)A |
UA)A.svg)
|
9 | 81.8 | |
|
>FR834720.1/91-162
UUUACGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUUAUUAAUAGGGAAUAAUAAUAGAAUUGACGUAAA ......((........)(..........((....................)..).......)...)......
>EU427478.1/141-218
UAAAUGAACCCAAAGGCAGUAUUUGGUAUUUCCAUUUAUUUAUAUUAAAAUAGGGGAUAAUAUUAGAAUUGACAUUUA ......((........)...(........((.........................)..).......)...)......
>DQ162901.1/38-112
AAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUGUAAAUUAAUAGGGAAUAAUAAUAGAAUUGACAUUUA ......((........)(..........((.......................)..).......)...)......
>DQ832717.1/4170-4246
UAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAAAUAAAUUAAAUUAUAAGGGAAUAAAAUUAGAAUUGACAUUUA ......((........)(..........((.........................)..).....).....)......
>ABWE01000061.1/86410-86482
AAAAUGGACCCAUAGGCAGUUUUUGGUAUUUCCUUUUUAAUAUUAAUGGGAAUAAUAAUAGUGUUGACAUUUU ......((.......)(...........((.....................)..).......)...)......
>DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA ......((........)(..........((......................)..).......)...)......
>GU138663.1/42360-42281
AAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUAUAAACUAAUUAAUACGGGAAUAAUUAUAUAAGAAUUGACAUUUU ......(.(......)(.........(.(..........................)..)........).....)......
>DQ162897.1/47-122
UAAAUGGACCCAGAGGCAGUUUUUGGUAUUUCCAUAUAAAUUAAAUGACUGGGGAUAAUAAUAGAAUUGACAUUUA ......((........)(..........((........................)..).......)...)......
>U17009.2/4176-4248
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUAAAUUUAAUAAGGGAAUAAUAAAAGAAUUGACAUUUA ......((........)(..........((.....................)..).......)...)...... |
||||||
| 3 |
|
(()().UUR.) ((A)UA)A U(U(U)) |
).svg)
|
6 | 54.5 | |
|
>DQ162901.1/38-112
AAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUGUAAAUUAAUAGGGAAUAAUAAUAGAAUUGACAUUUA ......((........)(...(.(....((.......................)..)..).)..)...)......
>FR834720.1/91-162
UUUACGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUUAUUAAUAGGGAAUAAUAAUAGAAUUGACGUAAA ......((........)(...(.(....((....................)..)..).)..)...)......
>DQ832717.1/4170-4246
UAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAAAUAAAUUAAAUUAUAAGGGAAUAAAAUUAGAAUUGACAUUUA ......((........)(...(.(....((.........................)..).)..)).....)......
>ABWE01000061.1/86410-86482
AAAAUGGACCCAUAGGCAGUUUUUGGUAUUUCCUUUUUAAUAUUAAUGGGAAUAAUAAUAGUGUUGACAUUUU ......((........)(...(.(....((.....................)..)..).)..)...)......
>DQ162897.1/47-122
UAAAUGGACCCAGAGGCAGUUUUUGGUAUUUCCAUAUAAAUUAAAUGACUGGGGAUAAUAAUAGAAUUGACAUUUA ......((........)(...(.(....((........................)..)....)).)...)......
>DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA ......((........)(...(.(....((......................)..)..).)..)...)...... |
||||||
| 4 |
|
(()().UUR.) ((A)UA)A U(U(U)) (YCRNR) |
.svg)
|
5 | 45.5 | |
|
>ABWE01000061.1/86410-86482
AAAAUGGACCCAUAGGCAGUUUUUGGUAUUUCCUUUUUAAUAUUAAUGGGAAUAAUAAUAGUGUUGACAUUUU ......(((.....).)(...(.(....((.....................)..)..).)..)...)......
>FR834720.1/91-162
UUUACGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUUAUUAAUAGGGAAUAAUAAUAGAAUUGACGUAAA ......(((.....).)(...(.(....((....................)..)..).)..)...)......
>DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA ......(((.....).)(...(.(....((......................)..)..).)..)...)......
>DQ832717.1/4170-4246
UAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAAAUAAAUUAAAUUAUAAGGGAAUAAAAUUAGAAUUGACAUUUA ......(((.....).)(...(.(....((.........................)..).)..)).....)......
>DQ162901.1/38-112
AAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUGUAAAUUAAUAGGGAAUAAUAAUAGAAUUGACAUUUA ......(((.....).)(...(.(....((.......................)..)..).)..)...)...... |
||||||
| 5 |
|
(()().UUR.) ((A)UA)A U(U(U)) (YCRNR) U(G(G)) |
).svg)
|
5 | 45.5 | |
|
>ABWE01000061.1/86410-86482
AAAAUGGACCCAUAGGCAGUUUUUGGUAUUUCCUUUUUAAUAUUAAUGGGAAUAAUAAUAGUGUUGACAUUUU ......(((.....).)(...(.(.(..((.....................)..)).).)..)...)......
>DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA ......(((.....).)(...(.(.(..((......................)..)).).)..)...)......
>DQ162901.1/38-112
AAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUGUAAAUUAAUAGGGAAUAAUAAUAGAAUUGACAUUUA ......(((.....).)(...(.(.(..((.......................)..)).).)..)...)......
>FR834720.1/91-162
UUUACGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUUAUUAAUAGGGAAUAAUAAUAGAAUUGACGUAAA ......(((.....).)(...(.(.(..((....................)..)).).)..)...)......
>DQ832717.1/4170-4246
UAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAAAUAAAUUAAAUUAUAAGGGAAUAAAAUUAGAAUUGACAUUUA ......(((.....).)(...(.(.(..((.........................)..)))..)).....)...... |
||||||
| 6 |
|
(()().UUR.) ((A)UA)A U(U(U)) (YCRNR) U(G(G)) (.A.) |
.svg)
|
5 | 45.5 | |
|
>DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA ......(((.....).)(...(.(.(..((........(...).........)..)).).)..)...)......
>DQ832717.1/4170-4246
UAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAAAUAAAUUAAAUUAUAAGGGAAUAAAAUUAGAAUUGACAUUUA ......(((.....).)(...(.(.(..((........(......).........)..)))..)).....)......
>ABWE01000061.1/86410-86482
AAAAUGGACCCAUAGGCAGUUUUUGGUAUUUCCUUUUUAAUAUUAAUGGGAAUAAUAAUAGUGUUGACAUUUU ......(((.....).)(...(.(.(..((........(..).........)..)).).)..)...)......
>DQ162901.1/38-112
AAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUGUAAAUUAAUAGGGAAUAAUAAUAGAAUUGACAUUUA ......(((.....).)(...(.(.(..((........(....).........)..)).).)..)...)......
>FR834720.1/91-162
UUUACGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUUAUUAAUAGGGAAUAAUAAUAGAAUUGACGUAAA ......(((.....).)(...(.(.(..((........(..)........)..)).).)..)...)...... |
||||||
| 7 |
|
(()().UUR.) ((A)UA)A U(U(U)) (YCRNR) U(G(G)) (.A.) (A()UU) |
UU).svg)
|
4 | 36.4 | |
|
>DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA (.(...(((.....).)(...(.(.(..((........(...).........)..)).).)..)...)..)..)
>ABWE01000061.1/86410-86482
AAAAUGGACCCAUAGGCAGUUUUUGGUAUUUCCUUUUUAAUAUUAAUGGGAAUAAUAAUAGUGUUGACAUUUU (.(...(((.....).)(...(.(.(..((........(..).........)..)).).)..)...)..)..)
>DQ162901.1/38-112
AAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUGUAAAUUAAUAGGGAAUAAUAAUAGAAUUGACAUUUA (.(...(((.....).)(...(.(.(..((........(....).........)..)).).)..)...)..)..)
>DQ832717.1/4170-4246
UAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAAAUAAAUUAAAUUAUAAGGGAAUAAAAUUAGAAUUGACAUUUA (.(...(((.....).)(...(.(.(..((........(......).........)..)))..)).....)..)..) |
||||||
|
>DQ162911.1/34-107 UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA ......((........)(.............................................)...)...... ......((........)(..........((......................)..).......)...)...... ......((........)(...(.(....((......................)..)..).)..)...)...... ......(((.....).)(...(.(....((......................)..)..).)..)...)...... ......(((.....).)(...(.(.(..((......................)..)).).)..)...)...... ......(((.....).)(...(.(.(..((........(...).........)..)).).)..)...)...... (.(...(((.....).)(...(.(.(..((........(...).........)..)).).)..)...)..)..) >DQ162901.1/38-112 AAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUGUAAAUUAAUAGGGAAUAAUAAUAGAAUUGACAUUUA ......((........)(..............................................)...)...... ......((........)(..........((.......................)..).......)...)...... ......((........)(...(.(....((.......................)..)..).)..)...)...... ......(((.....).)(...(.(....((.......................)..)..).)..)...)...... ......(((.....).)(...(.(.(..((.......................)..)).).)..)...)...... ......(((.....).)(...(.(.(..((........(....).........)..)).).)..)...)...... (.(...(((.....).)(...(.(.(..((........(....).........)..)).).)..)...)..)..) >DQ832717.1/4170-4246 UAAAUGGACCCAAAGGCAGUAUUUGGUAUUUCCAAAUAAAUUAAAUUAUAAGGGAAUAAAAUUAGAAUUGACAUUUA ......((........)(..............................................).....)...... ......((........)(..........((.........................)..).....).....)...... ......((........)(...(.(....((.........................)..).)..)).....)...... ......(((.....).)(...(.(....((.........................)..).)..)).....)...... ......(((.....).)(...(.(.(..((.........................)..)))..)).....)...... ......(((.....).)(...(.(.(..((........(......).........)..)))..)).....)...... (.(...(((.....).)(...(.(.(..((........(......).........)..)))..)).....)..)..) >ABWE01000061.1/86410-86482 AAAAUGGACCCAUAGGCAGUUUUUGGUAUUUCCUUUUUAAUAUUAAUGGGAAUAAUAAUAGUGUUGACAUUUU ......((.......)(.............................................)...)...... ......((.......)(...........((.....................)..).......)...)...... ......((........)(...(.(....((.....................)..)..).)..)...)...... ......(((.....).)(...(.(....((.....................)..)..).)..)...)...... ......(((.....).)(...(.(.(..((.....................)..)).).)..)...)...... ......(((.....).)(...(.(.(..((........(..).........)..)).).)..)...)...... (.(...(((.....).)(...(.(.(..((........(..).........)..)).).)..)...)..)..) >FR834720.1/91-162 UUUACGGACCCAAAGGCAGUAUUUGGUAUUUCCAUAUUUAUUAAUAGGGAAUAAUAAUAGAAUUGACGUAAA ......((........)(...........................................)...)...... ......((........)(..........((....................)..).......)...)...... ......((........)(...(.(....((....................)..)..).)..)...)...... ......(((.....).)(...(.(....((....................)..)..).)..)...)...... ......(((.....).)(...(.(.(..((....................)..)).).)..)...)...... ......(((.....).)(...(.(.(..((........(..)........)..)).).)..)...)...... >DQ162897.1/47-122 UAAAUGGACCCAGAGGCAGUUUUUGGUAUUUCCAUAUAAAUUAAAUGACUGGGGAUAAUAAUAGAAUUGACAUUUA ......((........)(...............................................)...)...... ......((........)(..........((........................)..).......)...)...... ......((........)(...(.(....((........................)..)....)).)...)...... >U17009.2/4176-4248 UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUAAAUUUAAUAAGGGAAUAAUAAAAGAAUUGACAUUUA ......((........)(............................................)...)...... ......((........)(..........((.....................)..).......)...)...... >GU138663.1/42360-42281 AAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUAUAAACUAAUUAAUACGGGAAUAAUUAUAUAAGAAUUGACAUUUU ......((........).(...............................................)......)...... ......(.(......)(.........(.(..........................)..)........).....)...... >EU427478.1/141-218 UAAAUGAACCCAAAGGCAGUAUUUGGUAUUUCCAUUUAUUUAUAUUAAAAUAGGGGAUAAUAUUAGAAUUGACAUUUA ......((........)...(..............................................)...)...... ......((........)...(........((.........................)..).......)...)...... >AF007261.1/62923-63007 ACUAUGGAACCGAGGGCGGAUCUCGGCAUCUCCAUAAAAAUGUUUGAUAACAUUUUUUGGGGAUGUUUUUAGUAUUCGACAUAGU ..........((...........)(..........................................)...)............. |
||||||
| ORB | p-value |
ORB frequency (per structure per nucleotide) |
Means ratio |
|||||
|---|---|---|---|---|---|---|---|---|
| 1 | (()().UUR.) |
().UUR.).svg)
|
().UUR.).svg)
|
< 0.001 |
().UUR.).jpeg)
|
49.2 | ||
().UUR.)/instance_1.svg)
().UUR.)/instance_2.svg)
().UUR.)/instance_3.svg)
().UUR.)/instance_4.svg)
().UUR.)/instance_5.svg)
().UUR.)/instance_6.svg)
().UUR.)/instance_7.svg)
().UUR.)/instance_8.svg)
().UUR.)/instance_9.svg)
().UUR.)/instance_10.svg)
().UUR.)/instance_11.svg)
().UUR.)/instance_12.svg)
().UUR.)/instance_13.svg)
().UUR.)/instance_14.svg)
().UUR.)/instance_15.svg)
().UUR.)/instance_16.svg)
().UUR.)/instance_17.svg)
().UUR.)/instance_18.svg)
().UUR.)/instance_19.svg)
().UUR.)/instance_20.svg)
().UUR.)/instance_21.svg)
().UUR.)/instance_22.svg)
().UUR.)/instance_23.svg)
().UUR.)/instance_24.svg)
().UUR.)/instance_25.svg)
().UUR.)/instance_26.svg)
().UUR.)/instance_27.svg)
|
||||||||
|
DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA .........1.........2.........3.........4.........5.........6.........7.... 12345678901234567890123456789012345678901234567890123456789012345678901234 |
||||||||
| 2 | ((A)UA)A |
UA)A.svg)
|
UA)A.svg)
|
< 0.001 |
UA)A.jpeg)
|
33.3 | ||
UA)A/instance_1.svg)
UA)A/instance_2.svg)
UA)A/instance_3.svg)
UA)A/instance_4.svg)
UA)A/instance_5.svg)
|
||||||||
|
DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA .........1.........2.........3.........4.........5.........6.........7.... 12345678901234567890123456789012345678901234567890123456789012345678901234 |
||||||||
| 3 | (A()UU) |
UU).svg)
|
UU).svg)
|
< 0.001 |
UU).jpeg)
|
6.23 | ||
UU)/instance_1.svg)
UU)/instance_2.svg)
UU)/instance_3.svg)
|
||||||||
|
DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA .........1.........2.........3.........4.........5.........6.........7.... 12345678901234567890123456789012345678901234567890123456789012345678901234 |
||||||||
| 4 | U(U(U)) |
).svg)
|
).svg)
|
< 0.001 |
).jpeg)
|
4.51 | ||
)/instance_1.svg)
)/instance_2.svg)
)/instance_3.svg)
)/instance_4.svg)
)/instance_5.svg)
)/instance_6.svg)
|
||||||||
|
DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA .........1.........2.........3.........4.........5.........6.........7.... 12345678901234567890123456789012345678901234567890123456789012345678901234 |
||||||||
| 5 | (YCRNR) |
.svg)
|
.svg)
|
< 0.001 |
.jpeg)
|
1.14 | ||
/instance_1.svg)
|
||||||||
|
DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA .........1.........2.........3.........4.........5.........6.........7.... 12345678901234567890123456789012345678901234567890123456789012345678901234 |
||||||||
| 6 | U(G(G)) |
).svg)
|
).svg)
|
< 0.001 |
).jpeg)
|
2.07 | ||
)/instance_1.svg)
)/instance_2.svg)
)/instance_3.svg)
)/instance_4.svg)
)/instance_5.svg)
)/instance_6.svg)
)/instance_7.svg)
)/instance_8.svg)
)/instance_9.svg)
)/instance_10.svg)
|
||||||||
|
DQ162911.1/34-107
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||||||||
| 7 | (.A.) |
.svg)
|
.svg)
|
< 0.001 |
.jpeg)
|
1.65 | ||
/instance_1.svg)
/instance_2.svg)
/instance_3.svg)
/instance_4.svg)
/instance_5.svg)
/instance_6.svg)
/instance_7.svg)
/instance_8.svg)
/instance_9.svg)
/instance_10.svg)
/instance_11.svg)
/instance_12.svg)
/instance_13.svg)
/instance_14.svg)
/instance_15.svg)
|
||||||||
|
DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA .........1.........2.........3.........4.........5.........6.........7.... 12345678901234567890123456789012345678901234567890123456789012345678901234 |
||||||||
| ORB | p-value |
ORB frequency (per structure per nucleotide) |
Means ratio |
|||||
| NCM | p-value |
NCM frequency (per structure per nucleotide) |
Means ratio |
|||||
|---|---|---|---|---|---|---|---|---|
| 1 | (()().UUR.) |
|
|
< 0.001 |
|
49.2 | ||
|
|
||||||||
|
DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA .........1.........2.........3.........4.........5.........6.........7.... 12345678901234567890123456789012345678901234567890123456789012345678901234 |
||||||||
| 2 | (A()C()G) |
C()G).svg)
|
C()G).svg)
|
< 0.001 |
C()G).jpeg)
|
122 | ||
C()G)/instance_1.svg)
|
||||||||
|
DQ162911.1/34-107
UAAAUGGACCCAAAGGCGGUAUUUGGUAUUUCCAUUUAAAAAUUAAAAGGGAAUAAUAAUAGAAUUGACAUUUA .........1.........2.........3.........4.........5.........6.........7.... 12345678901234567890123456789012345678901234567890123456789012345678901234 |
||||||||
| NCM | p-value |
NCM frequency (per structure per nucleotide) |
Means ratio |
|||||
Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).