D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major

D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences

J. Mol. Biol., 435 (2023)

DUF1646 RNA (Rfam: RF03071)

Options

Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN

Rfam

D-ORB

Augmented

(.GGGNN.)
G(GU(U))
U(G(R))
A(NNY)N

100.0
97.2
100.0
91.6

(.GGGNN.)

% of positive sequence with ORB

Job*

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Sequence(s)*

Obtain

One structure matching the consensus structure ORBs
Several structures containing instances of most discriminative ORBs

Up to structures per sequence

Position offset nucleotides

Job*

Email*

Wildtype sequence*

Mutant sequences

All SNPs
Submit mutant sequences

Use the mutation generator

Deep neural network:

5-fold cross-validation: 99.5 %
(± 0.0958 %)

Testing accuracy: 84.9 %

Decision tree:

5-fold cross-validation: 97.7 %
(± 1.26 %)

Testing accuracy: 98.5 %

D-ORB structure

D-ORB structure decision tree:

5-fold cross-validation: 97.7 %
(± 1.26 %)

Testing accuracy: 98.5 %

of URS0000D68C16_12908/1-55

URS0000D68C16_12908/1-55

GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU
(..(.(((((((....)))))))))...((...))(((((((......)))))))
.........1.........2.........3.........4.........5.....
1234567890123456789012345678901234567890123456789012345

abstract shape: `()()()`

					Number of sequences
	Structure	ORBs			(out of 107)	(%)
1		(.GGGNN.)			107	100.0
>URS0000D66434_509191/1-56 GGUUGGAUGGCAAAAUUGCUAUUUUCAAGAGAGUCAGGCUUCUAGGGUGGGGAGCU ..........................................(......)...... >URS0000D6AA30_12908/1-51 GGUUGGGUUUUAUUUAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC .....................................(......)...... >URS0000D69211_12908/1-56 GGUUGGAUGAAUUUUUUAAUUCAUUUUCAAGAUCUGGCUUUUUAGGGUGGAAAGCU .........................................(.......)...... >URS0000D6ADE2_12908/1-57 GGUUGGGUUUUUAUCAGAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAGGC ...........................................(......)...... >URS0000D661DC_12908/1-58 GGUUGGGUUUUUACACAAAAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAGAAGC ............................................(......)...... >URS0000D6D3E2_12908/1-53 GGUUGGCAGCCCGUCCGGGCUGUUCAAGAUUUGAGCUUGUUGGGUGGAGAGCU .......................................(......)...... >URS0000D6739C_12908/1-57 GGUUGGGUUUUUAUCACAAUAAAAACUUUCAAGAUUCGCUUCUUUGGGUCAGGAAGC ...........................................(......)...... >URS0000D6892E_1423790/1-58 GGUUGGGUUUUUAGACAAUAAAAGCUUUCAAGAUUUCAGUCUCUUUGGGUCAGGAGAC ............................................(......)...... >URS0000D69BCC_12908/1-50 GGUUGGGUUUUAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGU ....................................(......)...... >URS0000D68D02_880478/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAACUUUCGGCUUCUUGGGUGGGAAGCU .........................................(......)...... >URS0000D6CC77_321956/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAAAAGCUUCUUUGGGUCAAGAAGC ...................................(......)...... >URS0000D69A9C_12908/1-49 GGUUGGAGCAUUUAAAGCUUUCAAGAUAUGCUUAUUUGGGUCAAUAAGC ...................................(......)...... >URS0000D674D5_509191/1-57 GGUUGGGUGAAUUCUAUAUUCGCUUUCAAGAUGAUUGGACUUCCGGGGUGGGAAGCU ...........................................(......)...... >URS0000D65DAD_272621/1-57 GGUUGGGUUUUUAUCAAAAUAAAAACUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC ...........................................(......)...... >URS0000D69719_525330/1-49 GGUUGGGUUUUAAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC ...................................(......)...... >URS0000D65CDE_394503/1-55 GGUUGAACGGAUAACUUCCGUUUUCAAGAGUAUUAGGCUUCUGGGGUGGGAAGCU .........................................(......)...... >URS0000D66621_585524/1-56 GGUUGGGUUUUUAAACAAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC ..........................................(......)...... >URS0000D69D58_12908/1-56 GGUUGGGUGAAUUAUUAGUUCACUUUCAAGAGAUUGGACUUCUGGGGUGGGAAGCU ..........................................(......)...... >URS0000D66394_596325/1-48 GGUUGGAGUUUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC ..................................(......)...... >URS0000D67952_1423758/1-51 GGUUGGGUUUUAUUAAAAACUUUCAAGAUUAGCUUAUUUGGGUCAAUAAGC .....................................(......)...... >URS0000D694B2_208596/1-46 GGUUGAGCAUAUGCUUUCAAGGAUUUUUCUUCAGGGGCGGGAAGAA ................................(......)...... >URS0000D6B15B_12908/1-50 GGUUGGGCGACUUUGUCGCUUUCAAGAAUUUGCUUCUUGGGUGGGGGGCC .........................................(.....).. >URS0000D6AF39_12908/1-63 GGUUGGGCGGUGCUGCUUUUGAAGGUGCCGUUUUCAAGAAAUUUGCUUUUUGGGUGGAAAGCU .................................................(......)...... >URS0000D6A7AB_12908/1-47 GGUUGGGCGUAUUGCUUUCAAGAUGUUGCCUUUUUGGGUGAGGGGGC .................................(......)...... >URS0000D67939_12908/1-53 GGUUGGGCGAAAUAAUUUCGUUUCAAGAGACUUGGCUUUUAGGGUGGAAAGCU .......................................(......)...... >URS0000D68A5D_12908/1-53 GGUUGGGCGAAUUAUAUUCGUUUACAAGCAUCUGACUUCUGGGGUGGGAAGUC .......................................(......)...... >URS0000D69607_370438/1-60 UGUUGGACGAACCUGUCCGGGUUCGUUUUCAAGGUUUGAAGGCUUCUGGGGUGGGAAGUC ..............................................(......)...... >URS0000D6B71A_588581/1-55 GGUUGAACGGAUAACUACCGUUUUCAAGAGUACUUGGCUUCUGGGGUGGGAAGCU .........................................(......)...... >URS0000D6576A_1033837/1-57 GGUUGGGUUUUUAUUACAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC ...........................................(......)...... >URS0000D65A96_12908/1-58 GGUUGGGCGAAUUCAAUAUUCGCUUUCAAGAGUUAAAAACUUCUGGGGGUGGGAGGCU ............................................(.....)....... >URS0000D6B471_12908/1-63 GGUUGGACGGAUAGCAGGAACCAUCCGUUUUCAAGAGAAACCAAGUUUCUGGGGUGGGAAGCU .................................................(......)...... >URS0000D6CD0D_12908/1-64 GGUUGGGCAAACGCUGUGCAUUCAGCCGUUUGUUUUCAAGACCUAAAGCUUAAGGGUGGAAGCU ...................................................(......)..... >URS0000D68771_784613/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAUUUGCUUCUUUGGGUCAAGAAGC ...................................(......)...... >URS0000D672BF_12908/1-51 GGUUGGACGGCUAACGCCGUUUUCAAGAUGCGUCUUCUUGGGUGGGAAGUC .....................................(......)...... >URS0000D6D037_273068/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAACUUCGGGCUUCUUGGGUGGGAAGCU .........................................(......)...... >URS0000D69710_12908/1-53 GGUUGAGCAUUUUUAUGCUUCAAGGAUCAGGUUUGCCAAGGGGUGAGGCAAAC ......................................(.....)........ >URS0000D68B3B_12908/1-52 GGUUGAGCGGCGUCAAGCCGUUUUCAAGAAACAGCUUCUUGGGUGGGAAGUC ......................................(......)...... >URS0000D6A493_565653/1-52 GGUUGAGCAUUUCGAUGCUUCAAGGAUCACGUUCUCCAAGGGGUGAGGAGAA ......................................(.....)....... >URS0000D65EAB_633699/1-51 GGUUGGGUUUUAAAUAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC .....................................(......)...... >URS0000D6856E_755731/1-55 GGUUGAACGGAUAAUUUCCGUUUUCAAGAGUUUUAGGCUUCUGGGGUGGGAAGCU .........................................(......)...... >URS0000D670C7_12908/1-54 GGUUGGAAUGGUUAUUACCAUUUUCAAGAGAAGCGGGCUCUGGGGUGGGAGGCU ........................................(......)...... >URS0000D6B61F_333990/1-48 GGUUGGGCAUUUGCUUUCAAGGAUAAAUUCUUCAAGGGGUGAGAAGAA ..................................(.....)....... >URS0000D6841B_370438/1-58 UGUUGGACGAAUUUUUUCGAUUCGUUUUCAAGGAUUCAGGCUUCUGGGGUGGGAAGUC ............................................(......)...... >URS0000D6601E_1094508/1-52 GGUUGAGCAAGUUUUCUUGCUUCAAGAUCUUCGGCUUCCAGGGUGGGAAGCU ......................................(......)...... >URS0000D67BCE_12908/1-57 GGUUGGGUGGGCAAAGAUGCCUGCUUUCAAGAAAUUUGAUUUCCGGGGUGGGAAAUU ...........................................(......)...... >URS0000D6BF42_1087479/1-47 GGUUGGGCGCAAGCUUUCAAGACAUAGUUCUCCAAGGGUGAGGAGAA .................................(......)...... >URS0000D6AF81_12908/1-47 GGUUGGGCGUAUUGCUUUCAAGAUGUGGCCUUUUUGGGUGAGGGGGC .................................(......)...... >URS0000D69641_12908/1-54 GGUUGAGCAUUUUUUAUGCUUCAAGGAUCAGGUUUGCCAAGGGGUGAGGCAAAC .......................................(.....)........ >URS0000D681E7_565638/1-48 GGUUGGGCGAAAGCUUCAAGGAUUCAGUUCUUCAAGGGGUGAGAAGAA ..................................(.....)....... >URS0000D6C79F_12908/1-56 GGUUGGGCGAAUUCAAUAUUCGCUUUCAAGAGUUAAAACUUCUGGGGUGGGAAGCU ...............................................(.....).. >URS0000D670BB_858215/1-53 GGUUGAGCAAGAUUUUCUUGCUUCAAGAUUUUUGGCUUCUAGGGUGGGAAGCU .......................................(......)...... >URS0000D67426_888064/1-45 GGUUGGGCGCAAGCUUUCAAGACAUAUUCUCCAAGGGUGAGGAGA ................................(......)..... >URS0000D6B160_945021/1-46 GGUUGAGCGCAAGCUUUCAAGACAUGUCUUCCAAGGGUGAGGAAGU ................................(......)...... >URS0000D66950_580327/1-53 GGUUGAGCAAGAUUUUCUUGCUUCAAGAUUUUUGGCUUCCAGGGUGGGAAGCU .......................................(......)...... >URS0000D65A11_12908/1-57 GGUUGAACAGGUUUUAUAGCUUGCUUCAAGAAUUUUUGGCUUCCAGGGUGGGAAGCU ...........................................(......)...... >URS0000D6D32C_12908/1-51 GGUUGGACGGCUUGUGCCGUUUUCAAGAUACGUCUUCUUGGGUGGGAAGUC .....................................(......)...... >URS0000D6C330_746361/1-45 GGUUGGGCGCAAGCUUCAAGACAUUAUCUCCAAGGGUGAGGAGAU ...............................(......)...... >URS0000D667D4_791161/1-48 GGUUGGGCGUAAGCUUCAAGGAUCUAGUUCUUCAAGGGGUGAGAAGAA ..................................(.....)....... >URS0000D657A0_695560/1-58 GGUUGGGUUUUUACACAAAAUAAAAACUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC ............................................(......)...... >URS0000D66F08_663278/1-51 GGUUGGGCGGCUGAAGCCGUUUUCAAGAAUCAGCUUCUUGGGUGGGAAGUC ..........................................(.....).. >URS0000D6BD70_12908/1-44 GGUUGGGCGCAAGCUUCAAGACAUAUCUCCAAGGGUGAGGAGAU ..............................(......)...... >URS0000D6A67F_12908/1-49 GGUUGGAAAGGAAACUGUUUCAAGAUUUUUGCUUUAUGGGUGGGGAGCU ...................................(......)...... >URS0000D6B6E4_697303/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAAUUUUCGGCUUCUUGGGUGGGAAGCU .........................................(......)...... >URS0000D684C8_872326/1-49 GGUUGGAGUUUCAAAACUUUCAAGAUUUUGCUUCUUUGGGUCAAGAGGC ...................................(......)...... >URS0000D6C3FB_12908/1-50 GGUUGGACGUUUUAUACGUUUUCAAGAUUCUGCUUCUUGGGUGGGAAGCC ....................................(......)...... >URS0000D692EE_12908/1-48 GGUUGGGCAGGAAACUGCUUCAAGUCUGAGCUUUAAGGGUGGGAAGCU .......................................(.....).. >URS0000D68A00_12908/1-56 GGUUGGACGAAUAUGGAUUCGUUUUCAAGUCACUUUAGUUUCCAGGGGGGGAAGCU ..........................................(......)...... >URS0000D6B155_12908/1-55 GGUUGGGCAAACUUCGGUUUGUUUUCAAGUACUUUUGUUUCCGGGGGGGGAAGCU .........................................(......)...... >URS0000D69EBC_12908/1-56 GGUUGGACAGGCGAAAGUCUGUUUUCAAGAAAAAUAUGUUUCCUGGGUGGGAAGCU ..........................................(......)...... >URS0000D6C956_525365/1-56 GGUUGGGUUUUUAUUAAAUAAAAACUUUCAAGAUUUGCUCCUUUGGGUCAAGAAGC ..........................................(......)...... >URS0000D6879A_888064/1-48 GGUUGGGCGUAAGCUUCAAGGAUCUAGUUCUUCAAGGGGUGAGAAGGA ..................................(.....)....... >URS0000D68C16_12908/1-55 GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU .........................................(......)...... >URS0000D6628C_12908/1-54 GGUUGGACAAACUAAAGUUUGAUUUCAAGAAAUUUGUUUCCAGGGUGGGAGACU ........................................(......)...... >URS0000D65B56_12908/1-58 GGUUGGACAAAUAUAUGUUUGAUUCCAAGAGAAAUUCAGGUUUCUGGGGUGGGAAACU ............................................(.....)....... >URS0000D6B2B9_290402/1-54 GGUUGGACAAGUUUGUACUUGAUUCCAAGAAAUUUGUUUCCAGGGUGGGAAACU ........................................(......)...... >URS0000D678D5_12908/1-50 GGUUGGACAGGAAACUGCUUCAAGAUUUUAAGCUUAUUGGGUGGGGAGCU ....................................(......)...... >URS0000D6CD68_12908/1-49 GGUUGGGCAGGAACUGCUUCAAGAUGAUUGGCUUAUUGGGUGGGGAGCU ........................................(.....).. >URS0000D69B25_12908/1-50 GGUUGGGCAGGCAACUGCUUUCAAGUUUUGAGCUUUAAGGGUGGGGGGCU .........................................(.....).. >URS0000D65CF6_12908/1-55 GGUUGGGCAGUUUGUAUAAACUGUUUCAAGUUUUUGAGCUUUAGGGUGGAGAGCU ..........................................(.....)...... >URS0000D6671F_1196322/1-58 GGUUGGGCAAAUUUUAUUGUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU ............................................(......)...... >URS0000D67B94_991791/1-56 GGUUGAGCAAAUUUAUAUUUGUUUUCAAGAGCUUUGAAUUUCUGGGGUGGGAAAUU ..........................................(......)...... >URS0000D6CA7E_12908/1-58 GGUUGGGCAAAUUUUAUAAUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU ............................................(......)...... >URS0000D6D0EF_641107/1-56 GGUUGGGCAAAUUAUAUAAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAACU ..........................................(......)...... >URS0000D6B06A_641107/1-57 GGUUGGGCAAAUUCUACGAUUUGCUUUCAAGCAAUUUAGUUUCUGGGGUGGGAAACU ...........................................(......)...... >URS0000D6A9E8_1196322/1-54 GGUUGGACAAAUUUAUAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAACU ........................................(......)...... >URS0000D68A9A_12908/1-54 GGUUGGACAAGUUUGCACUUGAUUCCAAGAAAUUUGUUUCCAGGGUGGGAAACU ........................................(......)...... >URS0000D6B084_290402/1-58 GGUUGGGCAAAUUAUAUAAUUUGCUUUCAAGCAAUUUUGGUUUCUGGGGUGGGAAACU ............................................(......)...... >URS0000D6C7DC_748727/1-59 GGUUGGACAAAUAUUUAUUUGUUUUCAAGAUGAUAAUAUGACUUUUGGGGUGGAAAGUC .............................................(......)...... >URS0000D68DB9_545243/1-58 GGUUGGACAAAUUUUAUAAUUUGUUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAGCU ............................................(......)...... >URS0000D663B1_12908/1-58 GGUUGGACAAAUUUUAUAAUUUGUUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU ............................................(......)...... >URS0000D682C5_573061/1-58 GGUUGGGCAAAUUUGGUUAUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU ............................................(......)...... >URS0000D6877A_431943/1-57 GGUUGAACAAAUUUUAAUUUGAUUUCAAGAUAAAUAUGACUUUUAGGGUGGAAAGUC ...........................................(......)...... >URS0000D6BF2A_545243/1-57 GGUUGGACAAAUAAUUUAUUUGUUUUCAAGAGAUUAUGACUUUUGGGGUGGAAAGUA ...........................................(......)...... >URS0000D69104_290402/1-56 GGUUGGGCAAAUUAUAUAAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAGCU ..........................................(......)...... >URS0000D6747F_768486/1-50 GGUUGGGCAUAAUGCUUCAAGGAUCGCGUUCUUCAAGGGGUGAGAAGAAC ...................................(.....)........ >URS0000D6BBBA_12908/1-49 GGUUGGGCAGGUAACUGCUUUCAAGUUUUGAGCUUAAGGGUGGAAAGCU ....................................(.....)...... >URS0000D6AAFA_536227/1-56 GGUUGAACAAAUUUUUAUUUGAUUUCAAGAGAAUUUGACUUUUGGGGUGGGAAGUC ..........................................(......)...... >URS0000D678B5_12908/1-56 GGUUGGACAGAUUGCAUCUGAUUCCAAGAGAUUUUUGGUUUCUGGGGUGGGAAACU ..........................................(......)...... >URS0000D66F41_12908/1-58 GGUUGGACAAACAUAUGUUUGAUUCCAAGAGAAUUUCAGGUUUCUGGGGUGGGAAACU ............................................(.....)....... >URS0000D659FD_12908/1-59 GGUCGAGCGGAUAAAGGUGUCCGCAUUCGAGAUAAAUAAAGCUUCUGGGGCGGGAAGCU .............................................(......)...... >URS0000D66F1A_12908/1-59 GGUUGAACAAAUAAUUUUAUUUGAUUUCAAGAGUAGCAUGGCUUUUGGGGUGGAAAGUC .............................................(......)...... >URS0000D68387_12908/1-51 GGUUGGACGGCUUAUGCCGUUUUCAAGAAUGAGCUUCUUGGGUGGGAAGUC ..........................................(.....).. >URS0000D69B2E_880633/1-57 GGUUGGGUUUUUAUCAGAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC ...........................................(......)...... >URS0000D68BD0_485916/1-66 GGCUGGGCGAGUUAAUUUGUAUUUAUUCGCUUUCACAAGUGAUUUACGACUUCUGGGUGGGAAGCC .....................................................(.....)...... >URS0000D6BB10_509191/1-60 GGUUGAGUGUAUUCGUUAUAAAUACACUUUCAAGAGUUUAGGCUUCUGGGGUGGGAAGUC ..............................................(......)...... >URS0000D691D7_12908/1-55 GGUUGAACGGAUAUUGUCCGUUUUCAAGAGAUUCAGGCUUCUGGGGUGGGAAGCU .........................................(......)...... >URS0000D6ACB1_353496/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAAAAGCUUCUUUGGGUCAAGGAGC ...................................(......)......
2		(.GGGNN.) G(GU(U))			101	94.4
>URS0000D672BF_12908/1-51 GGUUGGACGGCUAACGCCGUUUUCAAGAUGCGUCUUCUUGGGUGGGAAGUC (..(..................)).............(......)...... >URS0000D68A5D_12908/1-53 GGUUGGGCGAAUUAUAUUCGUUUACAAGCAUCUGACUUCUGGGGUGGGAAGUC (..(...................))..............(......)...... >URS0000D65EAB_633699/1-51 GGUUGGGUUUUAAAUAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(..................)).............(......)...... >URS0000D69710_12908/1-53 GGUUGAGCAUUUUUAUGCUUCAAGGAUCAGGUUUGCCAAGGGGUGAGGCAAAC (..(.................))...............(.....)........ >URS0000D69BCC_12908/1-50 GGUUGGGUUUUAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGU (..(.................)).............(......)...... >URS0000D66434_509191/1-56 GGUUGGAUGGCAAAAUUGCUAUUUUCAAGAGAGUCAGGCUUCUAGGGUGGGGAGCU (..(....................).)...............(......)...... >URS0000D69719_525330/1-49 GGUUGGGUUUUAAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(................)).............(......)...... >URS0000D6A493_565653/1-52 GGUUGAGCAUUUCGAUGCUUCAAGGAUCACGUUCUCCAAGGGGUGAGGAGAA (..(.................))...............(.....)....... >URS0000D6AA30_12908/1-51 GGUUGGGUUUUAUUUAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(..................)).............(......)...... >URS0000D68B3B_12908/1-52 GGUUGAGCGGCGUCAAGCCGUUUUCAAGAAACAGCUUCUUGGGUGGGAAGUC (..(..................))..............(......)...... >URS0000D6B15B_12908/1-50 GGUUGGGCGACUUUGUCGCUUUCAAGAAUUUGCUUCUUGGGUGGGGGGCC (..(...................))................(.....).. >URS0000D65DAD_272621/1-57 GGUUGGGUUUUUAUCAAAAUAAAAACUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(.......................).).............(......)...... >URS0000D661DC_12908/1-58 GGUUGGGUUUUUACACAAAAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAGAAGC (..(.........................)).............(......)...... >URS0000D6AF81_12908/1-47 GGUUGGGCGUAUUGCUUUCAAGAUGUGGCCUUUUUGGGUGAGGGGGC (..(.............))..............(......)...... >URS0000D6ADE2_12908/1-57 GGUUGGGUUUUUAUCAGAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAGGC (..(........................)).............(......)...... >URS0000D6A7AB_12908/1-47 GGUUGGGCGUAUUGCUUUCAAGAUGUUGCCUUUUUGGGUGAGGGGGC (..(...............))............(......)...... >URS0000D6B71A_588581/1-55 GGUUGAACGGAUAACUACCGUUUUCAAGAGUACUUGGCUUCUGGGGUGGGAAGCU (..(...................).)...............(......)...... >URS0000D6576A_1033837/1-57 GGUUGGGUUUUUAUUACAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(.......................))..............(......)...... >URS0000D6D3E2_12908/1-53 GGUUGGCAGCCCGUCCGGGCUGUUCAAGAUUUGAGCUUGUUGGGUGGAGAGCU (..(...................))..............(......)...... >URS0000D6601E_1094508/1-52 GGUUGAGCAAGUUUUCUUGCUUCAAGAUCUUCGGCUUCCAGGGUGGGAAGCU (..(..................))..............(......)...... >URS0000D6BF42_1087479/1-47 GGUUGGGCGCAAGCUUUCAAGACAUAGUUCUCCAAGGGUGAGGAGAA (..(..............)).............(......)...... >URS0000D67426_888064/1-45 GGUUGGGCGCAAGCUUUCAAGACAUAUUCUCCAAGGGUGAGGAGA (..(..............))............(......)..... >URS0000D6739C_12908/1-57 GGUUGGGUUUUUAUCACAAUAAAAACUUUCAAGAUUCGCUUCUUUGGGUCAGGAAGC (..(........................)).............(......)...... >URS0000D69641_12908/1-54 GGUUGAGCAUUUUUUAUGCUUCAAGGAUCAGGUUUGCCAAGGGGUGAGGCAAAC (..(..................))...............(.....)........ >URS0000D6B471_12908/1-63 GGUUGGACGGAUAGCAGGAACCAUCCGUUUUCAAGAGAAACCAAGUUUCUGGGGUGGGAAGCU (..(..........................)..)...............(......)...... >URS0000D6856E_755731/1-55 GGUUGAACGGAUAAUUUCCGUUUUCAAGAGUUUUAGGCUUCUGGGGUGGGAAGCU (..(...................).)...............(......)...... >URS0000D6D32C_12908/1-51 GGUUGGACGGCUUGUGCCGUUUUCAAGAUACGUCUUCUUGGGUGGGAAGUC (..(..................)).............(......)...... >URS0000D68D02_880478/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAACUUUCGGCUUCUUGGGUGGGAAGCU (..(...................))................(......)...... >URS0000D681E7_565638/1-48 GGUUGGGCGAAAGCUUCAAGGAUUCAGUUCUUCAAGGGGUGAGAAGAA (..(..............))..............(.....)....... >URS0000D674D5_509191/1-57 GGUUGGGUGAAUUCUAUAUUCGCUUUCAAGAUGAUUGGACUUCCGGGGUGGGAAGCU (..(.....................).)...............(......)...... >URS0000D694B2_208596/1-46 GGUUGAGCAUAUGCUUUCAAGGAUUUUUCUUCAGGGGCGGGAAGAA (..(..............))............(......)...... >URS0000D67939_12908/1-53 GGUUGGGCGAAAUAAUUUCGUUUCAAGAGACUUGGCUUUUAGGGUGGAAAGCU (..(..................))...............(......)...... >URS0000D69D58_12908/1-56 GGUUGGGUGAAUUAUUAGUUCACUUUCAAGAGAUUGGACUUCUGGGGUGGGAAGCU (..(....................))................(......)...... >URS0000D69A9C_12908/1-49 GGUUGGAGCAUUUAAAGCUUUCAAGAUAUGCUUAUUUGGGUCAAUAAGC (..(.................))............(......)...... >URS0000D6A67F_12908/1-49 GGUUGGAAAGGAAACUGUUUCAAGAUUUUUGCUUUAUGGGUGGGGAGCU (..(.................))............(......)...... >URS0000D6BD70_12908/1-44 GGUUGGGCGCAAGCUUCAAGACAUAUCUCCAAGGGUGAGGAGAU (..(............))............(......)...... >URS0000D6C3FB_12908/1-50 GGUUGGACGUUUUAUACGUUUUCAAGAUUCUGCUUCUUGGGUGGGAAGCC (..(.................)).............(......)...... >URS0000D6B160_945021/1-46 GGUUGAGCGCAAGCUUUCAAGACAUGUCUUCCAAGGGUGAGGAAGU (..(..............))............(......)...... >URS0000D6C79F_12908/1-56 GGUUGGGCGAAUUCAAUAUUCGCUUUCAAGAGUUAAAACUUCUGGGGUGGGAAGCU (..(.......................))..................(.....).. >URS0000D6B61F_333990/1-48 GGUUGGGCAUUUGCUUUCAAGGAUAAAUUCUUCAAGGGGUGAGAAGAA (..(..............))..............(.....)....... >URS0000D6879A_888064/1-48 GGUUGGGCGUAAGCUUCAAGGAUCUAGUUCUUCAAGGGGUGAGAAGGA (..(.............))...............(.....)....... >URS0000D670BB_858215/1-53 GGUUGAGCAAGAUUUUCUUGCUUCAAGAUUUUUGGCUUCUAGGGUGGGAAGCU (..(...................))..............(......)...... >URS0000D65A96_12908/1-58 GGUUGGGCGAAUUCAAUAUUCGCUUUCAAGAGUUAAAAACUUCUGGGGGUGGGAGGCU (..(.....................).)................(.....)....... >URS0000D67BCE_12908/1-57 GGUUGGGUGGGCAAAGAUGCCUGCUUUCAAGAAAUUUGAUUUCCGGGGUGGGAAAUU (..(.....................).)...............(......)...... >URS0000D68771_784613/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAUUUGCUUCUUUGGGUCAAGAAGC (..(.................))............(......)...... >URS0000D670C7_12908/1-54 GGUUGGAAUGGUUAUUACCAUUUUCAAGAGAAGCGGGCUCUGGGGUGGGAGGCU (..(...................))...............(......)...... >URS0000D6D037_273068/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAACUUCGGGCUUCUUGGGUGGGAAGCU (..(...................))................(......)...... >URS0000D657A0_695560/1-58 GGUUGGGUUUUUACACAAAAUAAAAACUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(.........................)).............(......)...... >URS0000D66950_580327/1-53 GGUUGAGCAAGAUUUUCUUGCUUCAAGAUUUUUGGCUUCCAGGGUGGGAAGCU (..(...................))..............(......)...... >URS0000D65A11_12908/1-57 GGUUGAACAGGUUUUAUAGCUUGCUUCAAGAAUUUUUGGCUUCCAGGGUGGGAAGCU (..(....................)).................(......)...... >URS0000D684C8_872326/1-49 GGUUGGAGUUUCAAAACUUUCAAGAUUUUGCUUCUUUGGGUCAAGAGGC (..(.................))............(......)...... >URS0000D667D4_791161/1-48 GGUUGGGCGUAAGCUUCAAGGAUCUAGUUCUUCAAGGGGUGAGAAGAA (..(..............))..............(.....)....... >URS0000D6C330_746361/1-45 GGUUGGGCGCAAGCUUCAAGACAUUAUCUCCAAGGGUGAGGAGAU (..(.............))............(......)...... >URS0000D6671F_1196322/1-58 GGUUGGGCAAAUUUUAUUGUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU (..(......................))................(......)...... >URS0000D692EE_12908/1-48 GGUUGGGCAGGAAACUGCUUCAAGUCUGAGCUUUAAGGGUGGGAAGCU (..(.................))................(.....).. >URS0000D6B155_12908/1-55 GGUUGGGCAAACUUCGGUUUGUUUUCAAGUACUUUUGUUUCCGGGGGGGGAAGCU (..(...................).)...............(......)...... >URS0000D6B06A_641107/1-57 GGUUGGGCAAAUUCUACGAUUUGCUUUCAAGCAAUUUAGUUUCUGGGGUGGGAAACU (..(......................))...............(......)...... >URS0000D6B6E4_697303/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAAUUUUCGGCUUCUUGGGUGGGAAGCU (..(...................))................(......)...... >URS0000D69EBC_12908/1-56 GGUUGGACAGGCGAAAGUCUGUUUUCAAGAAAAAUAUGUUUCCUGGGUGGGAAGCU (..(....................).)...............(......)...... >URS0000D68A00_12908/1-56 GGUUGGACGAAUAUGGAUUCGUUUUCAAGUCACUUUAGUUUCCAGGGGGGGAAGCU (..(....................).)...............(......)...... >URS0000D68C16_12908/1-55 GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU (..(...................).)...............(......)...... >URS0000D678D5_12908/1-50 GGUUGGACAGGAAACUGCUUCAAGAUUUUAAGCUUAUUGGGUGGGGAGCU (..(.................)).............(......)...... >URS0000D6628C_12908/1-54 GGUUGGACAAACUAAAGUUUGAUUUCAAGAAAUUUGUUUCCAGGGUGGGAGACU (..(...................))...............(......)...... >URS0000D69211_12908/1-56 GGUUGGAUGAAUUUUUUAAUUCAUUUUCAAGAUCUGGCUUUUUAGGGUGGAAAGCU (..(..................)..)...............(.......)...... >URS0000D6BBBA_12908/1-49 GGUUGGGCAGGUAACUGCUUUCAAGUUUUGAGCUUAAGGGUGGAAAGCU (..(................))..............(.....)...... >URS0000D6C956_525365/1-56 GGUUGGGUUUUUAUUAAAUAAAAACUUUCAAGAUUUGCUCCUUUGGGUCAAGAAGC (..(......................))..............(......)...... >URS0000D65CF6_12908/1-55 GGUUGGGCAGUUUGUAUAAACUGUUUCAAGUUUUUGAGCUUUAGGGUGGAGAGCU (..(....................))................(.....)...... >URS0000D66F08_663278/1-51 GGUUGGGCGGCUGAAGCCGUUUUCAAGAAUCAGCUUCUUGGGUGGGAAGUC (..(....................))................(.....).. >URS0000D67B94_991791/1-56 GGUUGAGCAAAUUUAUAUUUGUUUUCAAGAGCUUUGAAUUUCUGGGGUGGGAAAUU (..(....................).)...............(......)...... >URS0000D6D0EF_641107/1-56 GGUUGGGCAAAUUAUAUAAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAACU (..(.....................))...............(......)...... >URS0000D69B25_12908/1-50 GGUUGGGCAGGCAACUGCUUUCAAGUUUUGAGCUUUAAGGGUGGGGGGCU (..(..................)..)...............(.....).. >URS0000D6CD68_12908/1-49 GGUUGGGCAGGAACUGCUUCAAGAUGAUUGGCUUAUUGGGUGGGGAGCU (..(.................)).................(.....).. >URS0000D6ACB1_353496/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAAAAGCUUCUUUGGGUCAAGGAGC (..(.................))............(......)...... >URS0000D6B2B9_290402/1-54 GGUUGGACAAGUUUGUACUUGAUUCCAAGAAAUUUGUUUCCAGGGUGGGAAACU (..(...................))...............(......)...... >URS0000D68DB9_545243/1-58 GGUUGGACAAAUUUUAUAAUUUGUUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAGCU (..(......................).)...............(......)...... >URS0000D6A9E8_1196322/1-54 GGUUGGACAAAUUUAUAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAACU (..(...................))...............(......)...... >URS0000D6CA7E_12908/1-58 GGUUGGGCAAAUUUUAUAAUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU (..(......................).)...............(......)...... >URS0000D6BF2A_545243/1-57 GGUUGGACAAAUAAUUUAUUUGUUUUCAAGAGAUUAUGACUUUUGGGGUGGAAAGUA (..(.....................))................(......)...... >URS0000D67952_1423758/1-51 GGUUGGGUUUUAUUAAAAACUUUCAAGAUUAGCUUAUUUGGGUCAAUAAGC (..(..................)).............(......)...... >URS0000D69B2E_880633/1-57 GGUUGGGUUUUUAUCAGAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(........................)).............(......)...... >URS0000D6B084_290402/1-58 GGUUGGGCAAAUUAUAUAAUUUGCUUUCAAGCAAUUUUGGUUUCUGGGGUGGGAAACU (..(......................).)...............(......)...... >URS0000D6892E_1423790/1-58 GGUUGGGUUUUUAGACAAUAAAAGCUUUCAAGAUUUCAGUCUCUUUGGGUCAGGAGAC (..(.......................))...............(......)...... >URS0000D663B1_12908/1-58 GGUUGGACAAAUUUUAUAAUUUGUUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU (..(......................).)...............(......)...... >URS0000D69104_290402/1-56 GGUUGGGCAAAUUAUAUAAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAGCU (..(.....................))...............(......)...... >URS0000D6747F_768486/1-50 GGUUGGGCAUAAUGCUUCAAGGAUCGCGUUCUUCAAGGGGUGAGAAGAAC (..(...............))..............(.....)........ >URS0000D682C5_573061/1-58 GGUUGGGCAAAUUUGGUUAUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU (..(......................).)...............(......)...... >URS0000D691D7_12908/1-55 GGUUGAACGGAUAUUGUCCGUUUUCAAGAGAUUCAGGCUUCUGGGGUGGGAAGCU (..(...................).)...............(......)...... >URS0000D68A9A_12908/1-54 GGUUGGACAAGUUUGCACUUGAUUCCAAGAAAUUUGUUUCCAGGGUGGGAAACU (..(...................))...............(......)...... >URS0000D6AAFA_536227/1-56 GGUUGAACAAAUUUUUAUUUGAUUUCAAGAGAAUUUGACUUUUGGGGUGGGAAGUC (..(....................).)...............(......)...... >URS0000D678B5_12908/1-56 GGUUGGACAGAUUGCAUCUGAUUCCAAGAGAUUUUUGGUUUCUGGGGUGGGAAACU (..(...................).)................(......)...... >URS0000D66621_585524/1-56 GGUUGGGUUUUUAAACAAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(.......................)).............(......)...... >URS0000D6BB10_509191/1-60 GGUUGAGUGUAUUCGUUAUAAAUACACUUUCAAGAGUUUAGGCUUCUGGGGUGGGAAGUC (..(........................))................(......)...... >URS0000D66394_596325/1-48 GGUUGGAGUUUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(................))............(......)...... >URS0000D65CDE_394503/1-55 GGUUGAACGGAUAACUUCCGUUUUCAAGAGUAUUAGGCUUCUGGGGUGGGAAGCU (..(...................).)...............(......)...... >URS0000D68387_12908/1-51 GGUUGGACGGCUUAUGCCGUUUUCAAGAAUGAGCUUCUUGGGUGGGAAGUC (..(....................))................(.....).. >URS0000D6877A_431943/1-57 GGUUGAACAAAUUUUAAUUUGAUUUCAAGAUAAAUAUGACUUUUAGGGUGGAAAGUC (..(....................)..)...............(......)...... >URS0000D6C7DC_748727/1-59 GGUUGGACAAAUAUUUAUUUGUUUUCAAGAUGAUAAUAUGACUUUUGGGGUGGAAAGUC (..(....................)..).................(......)...... >URS0000D66F1A_12908/1-59 GGUUGAACAAAUAAUUUUAUUUGAUUUCAAGAGUAGCAUGGCUUUUGGGGUGGAAAGUC (..(......................)..)...............(......)...... >URS0000D65B56_12908/1-58 GGUUGGACAAAUAUAUGUUUGAUUCCAAGAGAAAUUCAGGUUUCUGGGGUGGGAAACU (..(.....................).)................(.....)....... >URS0000D66F41_12908/1-58 GGUUGGACAAACAUAUGUUUGAUUCCAAGAGAAUUUCAGGUUUCUGGGGUGGGAAACU (..(....................).).................(.....)....... >URS0000D6CC77_321956/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAAAAGCUUCUUUGGGUCAAGAAGC (..(.................))............(......)......
3		(.GGGNN.) G(GU(U)) U(G(R))			89	83.2
>URS0000D6D32C_12908/1-51 GGUUGGACGGCUUGUGCCGUUUUCAAGAUACGUCUUCUUGGGUGGGAAGUC (..(.(..............).)).............(......)...... >URS0000D672BF_12908/1-51 GGUUGGACGGCUAACGCCGUUUUCAAGAUGCGUCUUCUUGGGUGGGAAGUC (..(.(..............).)).............(......)...... >URS0000D6C3FB_12908/1-50 GGUUGGACGUUUUAUACGUUUUCAAGAUUCUGCUUCUUGGGUGGGAAGCC (..(.(.............).)).............(......)...... >URS0000D6C330_746361/1-45 GGUUGGGCGCAAGCUUCAAGACAUUAUCUCCAAGGGUGAGGAGAU (..(.(..........)))............(......)...... >URS0000D66950_580327/1-53 GGUUGAGCAAGAUUUUCUUGCUUCAAGAUUUUUGGCUUCCAGGGUGGGAAGCU (..(.(...............).))..............(......)...... >URS0000D6B6E4_697303/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAAUUUUCGGCUUCUUGGGUGGGAAGCU (..(.(................)))................(......)...... >URS0000D6AA30_12908/1-51 GGUUGGGUUUUAUUUAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(.(..............).)).............(......)...... >URS0000D65A96_12908/1-58 GGUUGGGCGAAUUCAAUAUUCGCUUUCAAGAGUUAAAAACUUCUGGGGGUGGGAGGCU (..(.(.................).).)................(.....)....... >URS0000D670C7_12908/1-54 GGUUGGAAUGGUUAUUACCAUUUUCAAGAGAAGCGGGCUCUGGGGUGGGAGGCU (..(.(................)))...............(......)...... >URS0000D6D037_273068/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAACUUCGGGCUUCUUGGGUGGGAAGCU (..(.(................)))................(......)...... >URS0000D69EBC_12908/1-56 GGUUGGACAGGCGAAAGUCUGUUUUCAAGAAAAAUAUGUUUCCUGGGUGGGAAGCU (..(.(................).).)...............(......)...... >URS0000D69719_525330/1-49 GGUUGGGUUUUAAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(.(............).)).............(......)...... >URS0000D681E7_565638/1-48 GGUUGGGCGAAAGCUUCAAGGAUUCAGUUCUUCAAGGGGUGAGAAGAA (..(.(........)...))..............(.....)....... >URS0000D68A00_12908/1-56 GGUUGGACGAAUAUGGAUUCGUUUUCAAGUCACUUUAGUUUCCAGGGGGGGAAGCU (..(.(................).).)...............(......)...... >URS0000D678D5_12908/1-50 GGUUGGACAGGAAACUGCUUCAAGAUUUUAAGCUUAUUGGGUGGGGAGCU (..(.(..............))).............(......)...... >URS0000D667D4_791161/1-48 GGUUGGGCGUAAGCUUCAAGGAUCUAGUUCUUCAAGGGGUGAGAAGAA (..(.(........)...))..............(.....)....... >URS0000D68C16_12908/1-55 GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU (..(.(................)).)...............(......)...... >URS0000D6856E_755731/1-55 GGUUGAACGGAUAAUUUCCGUUUUCAAGAGUUUUAGGCUUCUGGGGUGGGAAGCU (..(.(...............).).)...............(......)...... >URS0000D6BBBA_12908/1-49 GGUUGGGCAGGUAACUGCUUUCAAGUUUUGAGCUUAAGGGUGGAAAGCU (..(.(............).))..............(.....)...... >URS0000D68DB9_545243/1-58 GGUUGGACAAAUUUUAUAAUUUGUUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAGCU (..(.(..................).).)...............(......)...... >URS0000D69211_12908/1-56 GGUUGGAUGAAUUUUUUAAUUCAUUUUCAAGAUCUGGCUUUUUAGGGUGGAAAGCU (..(.(..............).)..)...............(.......)...... >URS0000D66434_509191/1-56 GGUUGGAUGGCAAAAUUGCUAUUUUCAAGAGAGUCAGGCUUCUAGGGUGGGGAGCU (..(.(................).).)...............(......)...... >URS0000D67426_888064/1-45 GGUUGGGCGCAAGCUUUCAAGACAUAUUCUCCAAGGGUGAGGAGA (..(.(........)...))............(......)..... >URS0000D69710_12908/1-53 GGUUGAGCAUUUUUAUGCUUCAAGGAUCAGGUUUGCCAAGGGGUGAGGCAAAC (..(.(.............).))...............(.....)........ >URS0000D6B2B9_290402/1-54 GGUUGGACAAGUUUGUACUUGAUUCCAAGAAAUUUGUUUCCAGGGUGGGAAACU (..(.(................)))...............(......)...... >URS0000D66F08_663278/1-51 GGUUGGGCGGCUGAAGCCGUUUUCAAGAAUCAGCUUCUUGGGUGGGAAGUC (..(.(..............)...))................(.....).. >URS0000D65EAB_633699/1-51 GGUUGGGUUUUAAAUAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(.(..............).)).............(......)...... >URS0000D67952_1423758/1-51 GGUUGGGUUUUAUUAAAAACUUUCAAGAUUAGCUUAUUUGGGUCAAUAAGC (..(.(..............).)).............(......)...... >URS0000D6C956_525365/1-56 GGUUGGGUUUUUAUUAAAUAAAAACUUUCAAGAUUUGCUCCUUUGGGUCAAGAAGC (..(.(...................)))..............(......)...... >URS0000D6A493_565653/1-52 GGUUGAGCAUUUCGAUGCUUCAAGGAUCACGUUCUCCAAGGGGUGAGGAGAA (..(.(.............).))...............(.....)....... >URS0000D68A5D_12908/1-53 GGUUGGGCGAAUUAUAUUCGUUUACAAGCAUCUGACUUCUGGGGUGGGAAGUC (..(.(...............).))..............(......)...... >URS0000D6747F_768486/1-50 GGUUGGGCAUAAUGCUUCAAGGAUCGCGUUCUUCAAGGGGUGAGAAGAAC (..(.(.........)...))..............(.....)........ >URS0000D6601E_1094508/1-52 GGUUGAGCAAGUUUUCUUGCUUCAAGAUCUUCGGCUUCCAGGGUGGGAAGCU (..(.(..............).))..............(......)...... >URS0000D68387_12908/1-51 GGUUGGACGGCUUAUGCCGUUUUCAAGAAUGAGCUUCUUGGGUGGGAAGUC (..(.(..............)...))................(.....).. >URS0000D663B1_12908/1-58 GGUUGGACAAAUUUUAUAAUUUGUUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU (..(.(..................).).)...............(......)...... >URS0000D6CA7E_12908/1-58 GGUUGGGCAAAUUUUAUAAUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU (..(.(..................).).)...............(......)...... >URS0000D69B2E_880633/1-57 GGUUGGGUUUUUAUCAGAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(.(....................).)).............(......)...... >URS0000D6CC77_321956/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAAAAGCUUCUUUGGGUCAAGAAGC (..(.(............)..))............(......)...... >URS0000D6B471_12908/1-63 GGUUGGACGGAUAGCAGGAACCAUCCGUUUUCAAGAGAAACCAAGUUUCUGGGGUGGGAAGCU (..(.(......................).)..)...............(......)...... >URS0000D6BD70_12908/1-44 GGUUGGGCGCAAGCUUCAAGACAUAUCUCCAAGGGUGAGGAGAU (..(.(........).))............(......)...... >URS0000D68D02_880478/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAACUUUCGGCUUCUUGGGUGGGAAGCU (..(.(................)))................(......)...... >URS0000D65DAD_272621/1-57 GGUUGGGUUUUUAUCAAAAUAAAAACUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(.(....................)).).............(......)...... >URS0000D694B2_208596/1-46 GGUUGAGCAUAUGCUUUCAAGGAUUUUUCUUCAGGGGCGGGAAGAA (..(.(........).))..............(......)...... >URS0000D68771_784613/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAUUUGCUUCUUUGGGUCAAGAAGC (..(.(............)))..............(......)...... >URS0000D6ADE2_12908/1-57 GGUUGGGUUUUUAUCAGAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAGGC (..(.(....................).)).............(......)...... >URS0000D692EE_12908/1-48 GGUUGGGCAGGAAACUGCUUCAAGUCUGAGCUUUAAGGGUGGGAAGCU (..(.(............)))..................(.....).. >URS0000D6628C_12908/1-54 GGUUGGACAAACUAAAGUUUGAUUUCAAGAAAUUUGUUUCCAGGGUGGGAGACU (..(.(................).))..............(......)...... >URS0000D69B25_12908/1-50 GGUUGGGCAGGCAACUGCUUUCAAGUUUUGAGCUUUAAGGGUGGGGGGCU (..(.(............).))...................(.....).. >URS0000D69641_12908/1-54 GGUUGAGCAUUUUUUAUGCUUCAAGGAUCAGGUUUGCCAAGGGGUGAGGCAAAC (..(.(..............).))...............(.....)........ >URS0000D65CF6_12908/1-55 GGUUGGGCAGUUUGUAUAAACUGUUUCAAGUUUUUGAGCUUUAGGGUGGAGAGCU (..(.(..................)))...............(.....)...... >URS0000D6B15B_12908/1-50 GGUUGGGCGACUUUGUCGCUUUCAAGAAUUUGCUUCUUGGGUGGGGGGCC (..(.(.............)...))................(.....).. >URS0000D6BB10_509191/1-60 GGUUGAGUGUAUUCGUUAUAAAUACACUUUCAAGAGUUUAGGCUUCUGGGGUGGGAAGUC (..(.(.....................)))................(......)...... >URS0000D6D0EF_641107/1-56 GGUUGGGCAAAUUAUAUAAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAACU (..(.(..................).))..............(......)...... >URS0000D6B160_945021/1-46 GGUUGAGCGCAAGCUUUCAAGACAUGUCUUCCAAGGGUGAGGAAGU (..(.(..........).))............(......)...... >URS0000D68B3B_12908/1-52 GGUUGAGCGGCGUCAAGCCGUUUUCAAGAAACAGCUUCUUGGGUGGGAAGUC (..(.(...............)))..............(......)...... >URS0000D670BB_858215/1-53 GGUUGAGCAAGAUUUUCUUGCUUCAAGAUUUUUGGCUUCUAGGGUGGGAAGCU (..(.(...............).))..............(......)...... >URS0000D6A67F_12908/1-49 GGUUGGAAAGGAAACUGUUUCAAGAUUUUUGCUUUAUGGGUGGGGAGCU (..(.(.............).))............(......)...... >URS0000D6879A_888064/1-48 GGUUGGGCGUAAGCUUCAAGGAUCUAGUUCUUCAAGGGGUGAGAAGGA (..(.(........).))................(.....)....... >URS0000D67B94_991791/1-56 GGUUGAGCAAAUUUAUAUUUGUUUUCAAGAGCUUUGAAUUUCUGGGGUGGGAAAUU (..(.(................).))................(......)...... >URS0000D6B71A_588581/1-55 GGUUGAACGGAUAACUACCGUUUUCAAGAGUACUUGGCUUCUGGGGUGGGAAGCU (..(.(...............).))................(......)...... >URS0000D691D7_12908/1-55 GGUUGAACGGAUAUUGUCCGUUUUCAAGAGAUUCAGGCUUCUGGGGUGGGAAGCU (..(.(...............).))................(......)...... >URS0000D6B084_290402/1-58 GGUUGGGCAAAUUAUAUAAUUUGCUUUCAAGCAAUUUUGGUUUCUGGGGUGGGAAACU (..(.(..................).))................(......)...... >URS0000D6A9E8_1196322/1-54 GGUUGGACAAAUUUAUAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAACU (..(.(................).))..............(......)...... >URS0000D69104_290402/1-56 GGUUGGGCAAAUUAUAUAAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAGCU (..(.(..................).))..............(......)...... >URS0000D682C5_573061/1-58 GGUUGGGCAAAUUUGGUUAUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU (..(.(..................).))................(......)...... >URS0000D6BF2A_545243/1-57 GGUUGGACAAAUAAUUUAUUUGUUUUCAAGAGAUUAUGACUUUUGGGGUGGAAAGUA (..(.(.................).))................(......)...... >URS0000D6BF42_1087479/1-47 GGUUGGGCGCAAGCUUUCAAGACAUAGUUCUCCAAGGGUGAGGAGAA (..(.(..........).)).............(......)...... >URS0000D6D3E2_12908/1-53 GGUUGGCAGCCCGUCCGGGCUGUUCAAGAUUUGAGCUUGUUGGGUGGAGAGCU (..(.(................)..))............(......)...... >URS0000D65CDE_394503/1-55 GGUUGAACGGAUAACUUCCGUUUUCAAGAGUAUUAGGCUUCUGGGGUGGGAAGCU (..(.(...............).))................(......)...... >URS0000D678B5_12908/1-56 GGUUGGACAGAUUGCAUCUGAUUCCAAGAGAUUUUUGGUUUCUGGGGUGGGAAACU (..(.(.................).))...............(......)...... >URS0000D66621_585524/1-56 GGUUGGGUUUUUAAACAAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(.(..........).))......................(......)...... >URS0000D67BCE_12908/1-57 GGUUGGGUGGGCAAAGAUGCCUGCUUUCAAGAAAUUUGAUUUCCGGGGUGGGAAAUU (..(.(..................).))...............(......)...... >URS0000D6C7DC_748727/1-59 GGUUGGACAAAUAUUUAUUUGUUUUCAAGAUGAUAAUAUGACUUUUGGGGUGGAAAGUC (..(.(................).))...................(......)...... >URS0000D674D5_509191/1-57 GGUUGGGUGAAUUCUAUAUUCGCUUUCAAGAUGAUUGGACUUCCGGGGUGGGAAGCU (..(.(.................).))................(......)...... >URS0000D6877A_431943/1-57 GGUUGAACAAAUUUUAAUUUGAUUUCAAGAUAAAUAUGACUUUUAGGGUGGAAAGUC (..(.(................).)).................(......)...... >URS0000D6576A_1033837/1-57 GGUUGGGUUUUUAUUACAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(.(....................)))..............(......)...... >URS0000D6CD68_12908/1-49 GGUUGGGCAGGAACUGCUUCAAGAUGAUUGGCUUAUUGGGUGGGGAGCU (..(.(.............)))..................(.....).. >URS0000D6739C_12908/1-57 GGUUGGGUUUUUAUCACAAUAAAAACUUUCAAGAUUCGCUUCUUUGGGUCAGGAAGC (..(.(....................).)).............(......)...... >URS0000D684C8_872326/1-49 GGUUGGAGUUUCAAAACUUUCAAGAUUUUGCUUCUUUGGGUCAAGAGGC (..(.(............)))..............(......)...... >URS0000D65B56_12908/1-58 GGUUGGACAAAUAUAUGUUUGAUUCCAAGAGAAAUUCAGGUUUCUGGGGUGGGAAACU (..(.(..................).))................(.....)....... >URS0000D68A9A_12908/1-54 GGUUGGACAAGUUUGCACUUGAUUCCAAGAAAUUUGUUUCCAGGGUGGGAAACU (..(.(...............).))...............(......)...... >URS0000D69D58_12908/1-56 GGUUGGGUGAAUUAUUAGUUCACUUUCAAGAGAUUGGACUUCUGGGGUGGGAAGCU (..(.(.................).))...............(......)...... >URS0000D66F41_12908/1-58 GGUUGGACAAACAUAUGUUUGAUUCCAAGAGAAUUUCAGGUUUCUGGGGUGGGAAACU (..(.(..................).))................(.....)....... >URS0000D66F1A_12908/1-59 GGUUGAACAAAUAAUUUUAUUUGAUUUCAAGAGUAGCAUGGCUUUUGGGGUGGAAAGUC (..(.(..................).)).................(......)...... >URS0000D67939_12908/1-53 GGUUGGGCGAAAUAAUUUCGUUUCAAGAGACUUGGCUUUUAGGGUGGAAAGCU (..(.(...............)))...............(......)...... >URS0000D69BCC_12908/1-50 GGUUGGGUUUUAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGU (..(.(.............)))..............(......)...... >URS0000D6C79F_12908/1-56 GGUUGGGCGAAUUCAAUAUUCGCUUUCAAGAGUUAAAACUUCUGGGGUGGGAAGCU (..(.(.................)...))..................(.....).. >URS0000D65A11_12908/1-57 GGUUGAACAGGUUUUAUAGCUUGCUUCAAGAAUUUUUGGCUUCCAGGGUGGGAAGCU (..(.(..................)..))..............(......)...... >URS0000D6B155_12908/1-55 GGUUGGGCAAACUUCGGUUUGUUUUCAAGUACUUUUGUUUCCGGGGGGGGAAGCU (..(.(................)).)...............(......)......
4		(.GGGNN.) G(GU(U)) U(G(R)) A(NNY)N			54	50.5
>URS0000D6BB10_509191/1-60 GGUUGAGUGUAUUCGUUAUAAAUACACUUUCAAGAGUUUAGGCUUCUGGGGUGGGAAGUC (..(.(.....................)))....(...).......(......)...... >URS0000D678D5_12908/1-50 GGUUGGACAGGAAACUGCUUCAAGAUUUUAAGCUUAUUGGGUGGGGAGCU (..(.(..............))).(...).......(......)...... >URS0000D694B2_208596/1-46 GGUUGAGCAUAUGCUUUCAAGGAUUUUUCUUCAGGGGCGGGAAGAA (..(.(........).))....(...).....(......)...... >URS0000D68C16_12908/1-55 GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU (..(.(................)).)...(...).......(......)...... >URS0000D68D02_880478/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAACUUUCGGCUUCUUGGGUGGGAAGCU (..(.(................)))...(...)........(......)...... >URS0000D6601E_1094508/1-52 GGUUGAGCAAGUUUUCUUGCUUCAAGAUCUUCGGCUUCCAGGGUGGGAAGCU (..(.(..............).))..(...).......(......)...... >URS0000D6628C_12908/1-54 GGUUGGACAAACUAAAGUUUGAUUUCAAGAAAUUUGUUUCCAGGGUGGGAGACU (..(.(................).))...(...)......(......)...... >URS0000D6AA30_12908/1-51 GGUUGGGUUUUAUUUAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(.(..............).)).(...).......(......)...... >URS0000D6ADE2_12908/1-57 GGUUGGGUUUUUAUCAGAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAGGC (..(.(....................).)).(...).......(......)...... >URS0000D6C330_746361/1-45 GGUUGGGCGCAAGCUUCAAGACAUUAUCUCCAAGGGUGAGGAGAU (..(.(..........))).(...)......(......)...... >URS0000D6B6E4_697303/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAAUUUUCGGCUUCUUGGGUGGGAAGCU (..(.(................)))....(...).......(......)...... >URS0000D692EE_12908/1-48 GGUUGGGCAGGAAACUGCUUCAAGUCUGAGCUUUAAGGGUGGGAAGCU (..(.(............))).......(...)......(.....).. >URS0000D68A00_12908/1-56 GGUUGGACGAAUAUGGAUUCGUUUUCAAGUCACUUUAGUUUCCAGGGGGGGAAGCU (..(.(................).).)....(...)......(......)...... >URS0000D65EAB_633699/1-51 GGUUGGGUUUUAAAUAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(.(..............).)).(...).......(......)...... >URS0000D69B2E_880633/1-57 GGUUGGGUUUUUAUCAGAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(.(....................).)).(...).......(......)...... >URS0000D67426_888064/1-45 GGUUGGGCGCAAGCUUUCAAGACAUAUUCUCCAAGGGUGAGGAGA (..(.(........)...)).(...)......(......)..... >URS0000D6C956_525365/1-56 GGUUGGGUUUUUAUUAAAUAAAAACUUUCAAGAUUUGCUCCUUUGGGUCAAGAAGC (..(.(...................)))..(...).......(......)...... >URS0000D67952_1423758/1-51 GGUUGGGUUUUAUUAAAAACUUUCAAGAUUAGCUUAUUUGGGUCAAUAAGC (..(.(..............).)).(...).......(......)...... >URS0000D667D4_791161/1-48 GGUUGGGCGUAAGCUUCAAGGAUCUAGUUCUUCAAGGGGUGAGAAGAA (..(.(........)...)).(...)........(.....)....... >URS0000D6879A_888064/1-48 GGUUGGGCGUAAGCUUCAAGGAUCUAGUUCUUCAAGGGGUGAGAAGGA (..(.(........).))...(...)........(.....)....... >URS0000D681E7_565638/1-48 GGUUGGGCGAAAGCUUCAAGGAUUCAGUUCUUCAAGGGGUGAGAAGAA (..(.(........)...)).(...)........(.....)....... >URS0000D6B15B_12908/1-50 GGUUGGGCGACUUUGUCGCUUUCAAGAAUUUGCUUCUUGGGUGGGGGGCC (..(.(.............)...))..(...).........(.....).. >URS0000D6D037_273068/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAACUUCGGGCUUCUUGGGUGGGAAGCU (..(.(................)))...(...)........(......)...... >URS0000D691D7_12908/1-55 GGUUGAACGGAUAUUGUCCGUUUUCAAGAGAUUCAGGCUUCUGGGGUGGGAAGCU (..(.(...............).))...(...)........(......)...... >URS0000D672BF_12908/1-51 GGUUGGACGGCUAACGCCGUUUUCAAGAUGCGUCUUCUUGGGUGGGAAGUC (..(.(..............).)).(...).......(......)...... >URS0000D6A67F_12908/1-49 GGUUGGAAAGGAAACUGUUUCAAGAUUUUUGCUUUAUGGGUGGGGAGCU (..(.(.............).)).(...)......(......)...... >URS0000D66F41_12908/1-58 GGUUGGACAAACAUAUGUUUGAUUCCAAGAGAAUUUCAGGUUUCUGGGGUGGGAAACU (..(.(..................).))...(...)........(.....)....... >URS0000D6739C_12908/1-57 GGUUGGGUUUUUAUCACAAUAAAAACUUUCAAGAUUCGCUUCUUUGGGUCAGGAAGC (..(.(....................).)).(...).......(......)...... >URS0000D6576A_1033837/1-57 GGUUGGGUUUUUAUUACAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(.(....................)))..(...).......(......)...... >URS0000D6BF42_1087479/1-47 GGUUGGGCGCAAGCUUUCAAGACAUAGUUCUCCAAGGGUGAGGAGAA (..(.(..........).)).(...).......(......)...... >URS0000D69BCC_12908/1-50 GGUUGGGUUUUAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGU (..(.(.............)))..(...).......(......)...... >URS0000D69D58_12908/1-56 GGUUGGGUGAAUUAUUAGUUCACUUUCAAGAGAUUGGACUUCUGGGGUGGGAAGCU (..(.(.................).))...(...).......(......)...... >URS0000D68A9A_12908/1-54 GGUUGGACAAGUUUGCACUUGAUUCCAAGAAAUUUGUUUCCAGGGUGGGAAACU (..(.(...............).))....(...)......(......)...... >URS0000D69211_12908/1-56 GGUUGGAUGAAUUUUUUAAUUCAUUUUCAAGAUCUGGCUUUUUAGGGUGGAAAGCU (..(.(..............).)..)...(...).......(.......)...... >URS0000D65B56_12908/1-58 GGUUGGACAAAUAUAUGUUUGAUUCCAAGAGAAAUUCAGGUUUCUGGGGUGGGAAACU (..(.(..................).))...(...)........(.....)....... >URS0000D6B155_12908/1-55 GGUUGGGCAAACUUCGGUUUGUUUUCAAGUACUUUUGUUUCCGGGGGGGGAAGCU (..(.(................)).)....(...)......(......)...... >URS0000D67BCE_12908/1-57 GGUUGGGUGGGCAAAGAUGCCUGCUUUCAAGAAAUUUGAUUUCCGGGGUGGGAAAUU (..(.(..................).))...(...).......(......)...... >URS0000D66F08_663278/1-51 GGUUGGGCGGCUGAAGCCGUUUUCAAGAAUCAGCUUCUUGGGUGGGAAGUC (..(.(..............)...)).....(...)......(.....).. >URS0000D6C79F_12908/1-56 GGUUGGGCGAAUUCAAUAUUCGCUUUCAAGAGUUAAAACUUCUGGGGUGGGAAGCU (..(.(.................)...))......(...).......(.....).. >URS0000D65A11_12908/1-57 GGUUGAACAGGUUUUAUAGCUUGCUUCAAGAAUUUUUGGCUUCCAGGGUGGGAAGCU (..(.(..................)..))..(...).......(......)...... >URS0000D67939_12908/1-53 GGUUGGGCGAAAUAAUUUCGUUUCAAGAGACUUGGCUUUUAGGGUGGAAAGCU (..(.(...............)))...(...).......(......)...... >URS0000D6D32C_12908/1-51 GGUUGGACGGCUUGUGCCGUUUUCAAGAUACGUCUUCUUGGGUGGGAAGUC (..(.(..............).)).(...).......(......)...... >URS0000D69EBC_12908/1-56 GGUUGGACAGGCGAAAGUCUGUUUUCAAGAAAAAUAUGUUUCCUGGGUGGGAAGCU (..(.(................).).)....(...)......(......)...... >URS0000D6856E_755731/1-55 GGUUGAACGGAUAAUUUCCGUUUUCAAGAGUUUUAGGCUUCUGGGGUGGGAAGCU (..(.(...............).).)..(...)........(......)...... >URS0000D6B084_290402/1-58 GGUUGGGCAAAUUAUAUAAUUUGCUUUCAAGCAAUUUUGGUUUCUGGGGUGGGAAACU (..(.(..................).))....(...).......(......)...... >URS0000D6B2B9_290402/1-54 GGUUGGACAAGUUUGUACUUGAUUCCAAGAAAUUUGUUUCCAGGGUGGGAAACU (..(.(................)))....(...)......(......)...... >URS0000D682C5_573061/1-58 GGUUGGGCAAAUUUGGUUAUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU (..(.(..................).))....(...).......(......)...... >URS0000D69719_525330/1-49 GGUUGGGUUUUAAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC (..(.(............).)).(...).......(......)...... >URS0000D678B5_12908/1-56 GGUUGGACAGAUUGCAUCUGAUUCCAAGAGAUUUUUGGUUUCUGGGGUGGGAAACU (..(.(.................).))...(...).......(......)...... >URS0000D6CA7E_12908/1-58 GGUUGGGCAAAUUUUAUAAUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU (..(.(..................).).)...(...).......(......)...... >URS0000D663B1_12908/1-58 GGUUGGACAAAUUUUAUAAUUUGUUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU (..(.(..................).).)...(...).......(......)...... >URS0000D68DB9_545243/1-58 GGUUGGACAAAUUUUAUAAUUUGUUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAGCU (..(.(..................).).)...(...).......(......)...... >URS0000D68387_12908/1-51 GGUUGGACGGCUUAUGCCGUUUUCAAGAAUGAGCUUCUUGGGUGGGAAGUC (..(.(..............)...)).....(...)......(.....).. >URS0000D65DAD_272621/1-57 GGUUGGGUUUUUAUCAAAAUAAAAACUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC (..(.(....................)).).(...).......(......)......

>URS0000D6AA30_12908/1-51 GGUUGGGUUUUAUUUAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC .....................................(......)...... (..(..................)).............(......)...... (..(.(..............).)).............(......)...... (..(.(..............).)).(...).......(......)...... >URS0000D69211_12908/1-56 GGUUGGAUGAAUUUUUUAAUUCAUUUUCAAGAUCUGGCUUUUUAGGGUGGAAAGCU .........................................(.......)...... (..(..................)..)...............(.......)...... (..(.(..............).)..)...............(.......)...... (..(.(..............).)..)...(...).......(.......)...... >URS0000D6ADE2_12908/1-57 GGUUGGGUUUUUAUCAGAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAGGC ...........................................(......)...... (..(........................)).............(......)...... (..(.(....................).)).............(......)...... (..(.(....................).)).(...).......(......)...... >URS0000D6739C_12908/1-57 GGUUGGGUUUUUAUCACAAUAAAAACUUUCAAGAUUCGCUUCUUUGGGUCAGGAAGC ...........................................(......)...... (..(........................)).............(......)...... (..(.(....................).)).............(......)...... (..(.(....................).)).(...).......(......)...... >URS0000D69BCC_12908/1-50 GGUUGGGUUUUAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGU ....................................(......)...... (..(.................)).............(......)...... (..(.(.............)))..............(......)...... (..(.(.............)))..(...).......(......)...... >URS0000D68D02_880478/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAACUUUCGGCUUCUUGGGUGGGAAGCU .........................................(......)...... (..(...................))................(......)...... (..(.(................)))................(......)...... (..(.(................)))...(...)........(......)...... >URS0000D65DAD_272621/1-57 GGUUGGGUUUUUAUCAAAAUAAAAACUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC ...........................................(......)...... (..(.......................).).............(......)...... (..(.(....................)).).............(......)...... (..(.(....................)).).(...).......(......)...... >URS0000D69719_525330/1-49 GGUUGGGUUUUAAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC ...................................(......)...... (..(................)).............(......)...... (..(.(............).)).............(......)...... (..(.(............).)).(...).......(......)...... >URS0000D69D58_12908/1-56 GGUUGGGUGAAUUAUUAGUUCACUUUCAAGAGAUUGGACUUCUGGGGUGGGAAGCU ..........................................(......)...... (..(....................))................(......)...... (..(.(.................).))...............(......)...... (..(.(.................).))...(...).......(......)...... >URS0000D67952_1423758/1-51 GGUUGGGUUUUAUUAAAAACUUUCAAGAUUAGCUUAUUUGGGUCAAUAAGC .....................................(......)...... (..(..................)).............(......)...... (..(.(..............).)).............(......)...... (..(.(..............).)).(...).......(......)...... >URS0000D694B2_208596/1-46 GGUUGAGCAUAUGCUUUCAAGGAUUUUUCUUCAGGGGCGGGAAGAA ................................(......)...... (..(..............))............(......)...... (..(.(........).))..............(......)...... (..(.(........).))....(...).....(......)...... >URS0000D6B15B_12908/1-50 GGUUGGGCGACUUUGUCGCUUUCAAGAAUUUGCUUCUUGGGUGGGGGGCC .........................................(.....).. (..(...................))................(.....).. (..(.(.............)...))................(.....).. (..(.(.............)...))..(...).........(.....).. >URS0000D67939_12908/1-53 GGUUGGGCGAAAUAAUUUCGUUUCAAGAGACUUGGCUUUUAGGGUGGAAAGCU .......................................(......)...... (..(..................))...............(......)...... (..(.(...............)))...............(......)...... (..(.(...............)))...(...).......(......)...... >URS0000D6576A_1033837/1-57 GGUUGGGUUUUUAUUACAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC ...........................................(......)...... (..(.......................))..............(......)...... (..(.(....................)))..............(......)...... (..(.(....................)))..(...).......(......)...... >URS0000D672BF_12908/1-51 GGUUGGACGGCUAACGCCGUUUUCAAGAUGCGUCUUCUUGGGUGGGAAGUC .....................................(......)...... (..(..................)).............(......)...... (..(.(..............).)).............(......)...... (..(.(..............).)).(...).......(......)...... >URS0000D6D037_273068/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAACUUCGGGCUUCUUGGGUGGGAAGCU .........................................(......)...... (..(...................))................(......)...... (..(.(................)))................(......)...... (..(.(................)))...(...)........(......)...... >URS0000D65EAB_633699/1-51 GGUUGGGUUUUAAAUAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC .....................................(......)...... (..(..................)).............(......)...... (..(.(..............).)).............(......)...... (..(.(..............).)).(...).......(......)...... >URS0000D6856E_755731/1-55 GGUUGAACGGAUAAUUUCCGUUUUCAAGAGUUUUAGGCUUCUGGGGUGGGAAGCU .........................................(......)...... (..(...................).)...............(......)...... (..(.(...............).).)...............(......)...... (..(.(...............).).)..(...)........(......)...... >URS0000D6601E_1094508/1-52 GGUUGAGCAAGUUUUCUUGCUUCAAGAUCUUCGGCUUCCAGGGUGGGAAGCU ......................................(......)...... (..(..................))..............(......)...... (..(.(..............).))..............(......)...... (..(.(..............).))..(...).......(......)...... >URS0000D67BCE_12908/1-57 GGUUGGGUGGGCAAAGAUGCCUGCUUUCAAGAAAUUUGAUUUCCGGGGUGGGAAAUU ...........................................(......)...... (..(.....................).)...............(......)...... (..(.(..................).))...............(......)...... (..(.(..................).))...(...).......(......)...... >URS0000D6BF42_1087479/1-47 GGUUGGGCGCAAGCUUUCAAGACAUAGUUCUCCAAGGGUGAGGAGAA .................................(......)...... (..(..............)).............(......)...... (..(.(..........).)).............(......)...... (..(.(..........).)).(...).......(......)...... >URS0000D681E7_565638/1-48 GGUUGGGCGAAAGCUUCAAGGAUUCAGUUCUUCAAGGGGUGAGAAGAA ..................................(.....)....... (..(..............))..............(.....)....... (..(.(........)...))..............(.....)....... (..(.(........)...)).(...)........(.....)....... >URS0000D6C79F_12908/1-56 GGUUGGGCGAAUUCAAUAUUCGCUUUCAAGAGUUAAAACUUCUGGGGUGGGAAGCU ...............................................(.....).. (..(.......................))..................(.....).. (..(.(.................)...))..................(.....).. (..(.(.................)...))......(...).......(.....).. >URS0000D67426_888064/1-45 GGUUGGGCGCAAGCUUUCAAGACAUAUUCUCCAAGGGUGAGGAGA ................................(......)..... (..(..............))............(......)..... (..(.(........)...))............(......)..... (..(.(........)...)).(...)......(......)..... >URS0000D65A11_12908/1-57 GGUUGAACAGGUUUUAUAGCUUGCUUCAAGAAUUUUUGGCUUCCAGGGUGGGAAGCU ...........................................(......)...... (..(....................)).................(......)...... (..(.(..................)..))..............(......)...... (..(.(..................)..))..(...).......(......)...... >URS0000D6D32C_12908/1-51 GGUUGGACGGCUUGUGCCGUUUUCAAGAUACGUCUUCUUGGGUGGGAAGUC .....................................(......)...... (..(..................)).............(......)...... (..(.(..............).)).............(......)...... (..(.(..............).)).(...).......(......)...... >URS0000D6C330_746361/1-45 GGUUGGGCGCAAGCUUCAAGACAUUAUCUCCAAGGGUGAGGAGAU ...............................(......)...... (..(.............))............(......)...... (..(.(..........)))............(......)...... (..(.(..........))).(...)......(......)...... >URS0000D667D4_791161/1-48 GGUUGGGCGUAAGCUUCAAGGAUCUAGUUCUUCAAGGGGUGAGAAGAA ..................................(.....)....... (..(..............))..............(.....)....... (..(.(........)...))..............(.....)....... (..(.(........)...)).(...)........(.....)....... >URS0000D66F08_663278/1-51 GGUUGGGCGGCUGAAGCCGUUUUCAAGAAUCAGCUUCUUGGGUGGGAAGUC ..........................................(.....).. (..(....................))................(.....).. (..(.(..............)...))................(.....).. (..(.(..............)...)).....(...)......(.....).. >URS0000D6A67F_12908/1-49 GGUUGGAAAGGAAACUGUUUCAAGAUUUUUGCUUUAUGGGUGGGGAGCU ...................................(......)...... (..(.................))............(......)...... (..(.(.............).))............(......)...... (..(.(.............).)).(...)......(......)...... >URS0000D6B6E4_697303/1-55 GGUUGGCAAGUCUUAUGACUUGUUCAAGAAUUUUCGGCUUCUUGGGUGGGAAGCU .........................................(......)...... (..(...................))................(......)...... (..(.(................)))................(......)...... (..(.(................)))....(...).......(......)...... >URS0000D692EE_12908/1-48 GGUUGGGCAGGAAACUGCUUCAAGUCUGAGCUUUAAGGGUGGGAAGCU .......................................(.....).. (..(.................))................(.....).. (..(.(............)))..................(.....).. (..(.(............))).......(...)......(.....).. >URS0000D68A00_12908/1-56 GGUUGGACGAAUAUGGAUUCGUUUUCAAGUCACUUUAGUUUCCAGGGGGGGAAGCU ..........................................(......)...... (..(....................).)...............(......)...... (..(.(................).).)...............(......)...... (..(.(................).).)....(...)......(......)...... >URS0000D6B155_12908/1-55 GGUUGGGCAAACUUCGGUUUGUUUUCAAGUACUUUUGUUUCCGGGGGGGGAAGCU .........................................(......)...... (..(...................).)...............(......)...... (..(.(................)).)...............(......)...... (..(.(................)).)....(...)......(......)...... >URS0000D69EBC_12908/1-56 GGUUGGACAGGCGAAAGUCUGUUUUCAAGAAAAAUAUGUUUCCUGGGUGGGAAGCU ..........................................(......)...... (..(....................).)...............(......)...... (..(.(................).).)...............(......)...... (..(.(................).).)....(...)......(......)...... >URS0000D6C956_525365/1-56 GGUUGGGUUUUUAUUAAAUAAAAACUUUCAAGAUUUGCUCCUUUGGGUCAAGAAGC ..........................................(......)...... (..(......................))..............(......)...... (..(.(...................)))..............(......)...... (..(.(...................)))..(...).......(......)...... >URS0000D6879A_888064/1-48 GGUUGGGCGUAAGCUUCAAGGAUCUAGUUCUUCAAGGGGUGAGAAGGA ..................................(.....)....... (..(.............))...............(.....)....... (..(.(........).))................(.....)....... (..(.(........).))...(...)........(.....)....... >URS0000D68C16_12908/1-55 GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU .........................................(......)...... (..(...................).)...............(......)...... (..(.(................)).)...............(......)...... (..(.(................)).)...(...).......(......)...... >URS0000D6628C_12908/1-54 GGUUGGACAAACUAAAGUUUGAUUUCAAGAAAUUUGUUUCCAGGGUGGGAGACU ........................................(......)...... (..(...................))...............(......)...... (..(.(................).))..............(......)...... (..(.(................).))...(...)......(......)...... >URS0000D65B56_12908/1-58 GGUUGGACAAAUAUAUGUUUGAUUCCAAGAGAAAUUCAGGUUUCUGGGGUGGGAAACU ............................................(.....)....... (..(.....................).)................(.....)....... (..(.(..................).))................(.....)....... (..(.(..................).))...(...)........(.....)....... >URS0000D6B2B9_290402/1-54 GGUUGGACAAGUUUGUACUUGAUUCCAAGAAAUUUGUUUCCAGGGUGGGAAACU ........................................(......)...... (..(...................))...............(......)...... (..(.(................)))...............(......)...... (..(.(................)))....(...)......(......)...... >URS0000D678D5_12908/1-50 GGUUGGACAGGAAACUGCUUCAAGAUUUUAAGCUUAUUGGGUGGGGAGCU ....................................(......)...... (..(.................)).............(......)...... (..(.(..............))).............(......)...... (..(.(..............))).(...).......(......)...... >URS0000D6CA7E_12908/1-58 GGUUGGGCAAAUUUUAUAAUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU ............................................(......)...... (..(......................).)...............(......)...... (..(.(..................).).)...............(......)...... (..(.(..................).).)...(...).......(......)...... >URS0000D68A9A_12908/1-54 GGUUGGACAAGUUUGCACUUGAUUCCAAGAAAUUUGUUUCCAGGGUGGGAAACU ........................................(......)...... (..(...................))...............(......)...... (..(.(...............).))...............(......)...... (..(.(...............).))....(...)......(......)...... >URS0000D6B084_290402/1-58 GGUUGGGCAAAUUAUAUAAUUUGCUUUCAAGCAAUUUUGGUUUCUGGGGUGGGAAACU ............................................(......)...... (..(......................).)...............(......)...... (..(.(..................).))................(......)...... (..(.(..................).))....(...).......(......)...... >URS0000D68DB9_545243/1-58 GGUUGGACAAAUUUUAUAAUUUGUUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAGCU ............................................(......)...... (..(......................).)...............(......)...... (..(.(..................).).)...............(......)...... (..(.(..................).).)...(...).......(......)...... >URS0000D663B1_12908/1-58 GGUUGGACAAAUUUUAUAAUUUGUUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU ............................................(......)...... (..(......................).)...............(......)...... (..(.(..................).).)...............(......)...... (..(.(..................).).)...(...).......(......)...... >URS0000D682C5_573061/1-58 GGUUGGGCAAAUUUGGUUAUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU ............................................(......)...... (..(......................).)...............(......)...... (..(.(..................).))................(......)...... (..(.(..................).))....(...).......(......)...... >URS0000D678B5_12908/1-56 GGUUGGACAGAUUGCAUCUGAUUCCAAGAGAUUUUUGGUUUCUGGGGUGGGAAACU ..........................................(......)...... (..(...................).)................(......)...... (..(.(.................).))...............(......)...... (..(.(.................).))...(...).......(......)...... >URS0000D66F41_12908/1-58 GGUUGGACAAACAUAUGUUUGAUUCCAAGAGAAUUUCAGGUUUCUGGGGUGGGAAACU ............................................(.....)....... (..(....................).).................(.....)....... (..(.(..................).))................(.....)....... (..(.(..................).))...(...)........(.....)....... >URS0000D68387_12908/1-51 GGUUGGACGGCUUAUGCCGUUUUCAAGAAUGAGCUUCUUGGGUGGGAAGUC ..........................................(.....).. (..(....................))................(.....).. (..(.(..............)...))................(.....).. (..(.(..............)...)).....(...)......(.....).. >URS0000D69B2E_880633/1-57 GGUUGGGUUUUUAUCAGAAUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC ...........................................(......)...... (..(........................)).............(......)...... (..(.(....................).)).............(......)...... (..(.(....................).)).(...).......(......)...... >URS0000D6BB10_509191/1-60 GGUUGAGUGUAUUCGUUAUAAAUACACUUUCAAGAGUUUAGGCUUCUGGGGUGGGAAGUC ..............................................(......)...... (..(........................))................(......)...... (..(.(.....................)))................(......)...... (..(.(.....................)))....(...).......(......)...... >URS0000D691D7_12908/1-55 GGUUGAACGGAUAUUGUCCGUUUUCAAGAGAUUCAGGCUUCUGGGGUGGGAAGCU .........................................(......)...... (..(...................).)...............(......)...... (..(.(...............).))................(......)...... (..(.(...............).))...(...)........(......)...... >URS0000D66434_509191/1-56 GGUUGGAUGGCAAAAUUGCUAUUUUCAAGAGAGUCAGGCUUCUAGGGUGGGGAGCU ..........................................(......)...... (..(....................).)...............(......)...... (..(.(................).).)...............(......)...... >URS0000D6D3E2_12908/1-53 GGUUGGCAGCCCGUCCGGGCUGUUCAAGAUUUGAGCUUGUUGGGUGGAGAGCU .......................................(......)...... (..(...................))..............(......)...... (..(.(................)..))............(......)...... >URS0000D6CC77_321956/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAAAAGCUUCUUUGGGUCAAGAAGC ...................................(......)...... (..(.................))............(......)...... (..(.(............)..))............(......)...... >URS0000D674D5_509191/1-57 GGUUGGGUGAAUUCUAUAUUCGCUUUCAAGAUGAUUGGACUUCCGGGGUGGGAAGCU ...........................................(......)...... (..(.....................).)...............(......)...... (..(.(.................).))................(......)...... >URS0000D65CDE_394503/1-55 GGUUGAACGGAUAACUUCCGUUUUCAAGAGUAUUAGGCUUCUGGGGUGGGAAGCU .........................................(......)...... (..(...................).)...............(......)...... (..(.(...............).))................(......)...... >URS0000D66621_585524/1-56 GGUUGGGUUUUUAAACAAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAUAAGC ..........................................(......)...... (..(.......................)).............(......)...... (..(.(..........).))......................(......)...... >URS0000D68A5D_12908/1-53 GGUUGGGCGAAUUAUAUUCGUUUACAAGCAUCUGACUUCUGGGGUGGGAAGUC .......................................(......)...... (..(...................))..............(......)...... (..(.(...............).))..............(......)...... >URS0000D6B71A_588581/1-55 GGUUGAACGGAUAACUACCGUUUUCAAGAGUACUUGGCUUCUGGGGUGGGAAGCU .........................................(......)...... (..(...................).)...............(......)...... (..(.(...............).))................(......)...... >URS0000D65A96_12908/1-58 GGUUGGGCGAAUUCAAUAUUCGCUUUCAAGAGUUAAAAACUUCUGGGGGUGGGAGGCU ............................................(.....)....... (..(.....................).)................(.....)....... (..(.(.................).).)................(.....)....... >URS0000D6B471_12908/1-63 GGUUGGACGGAUAGCAGGAACCAUCCGUUUUCAAGAGAAACCAAGUUUCUGGGGUGGGAAGCU .................................................(......)...... (..(..........................)..)...............(......)...... (..(.(......................).)..)...............(......)...... >URS0000D68771_784613/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAUUUGCUUCUUUGGGUCAAGAAGC ...................................(......)...... (..(.................))............(......)...... (..(.(............)))..............(......)...... >URS0000D69710_12908/1-53 GGUUGAGCAUUUUUAUGCUUCAAGGAUCAGGUUUGCCAAGGGGUGAGGCAAAC ......................................(.....)........ (..(.................))...............(.....)........ (..(.(.............).))...............(.....)........ >URS0000D68B3B_12908/1-52 GGUUGAGCGGCGUCAAGCCGUUUUCAAGAAACAGCUUCUUGGGUGGGAAGUC ......................................(......)...... (..(..................))..............(......)...... (..(.(...............)))..............(......)...... >URS0000D6A493_565653/1-52 GGUUGAGCAUUUCGAUGCUUCAAGGAUCACGUUCUCCAAGGGGUGAGGAGAA ......................................(.....)....... (..(.................))...............(.....)....... (..(.(.............).))...............(.....)....... >URS0000D670C7_12908/1-54 GGUUGGAAUGGUUAUUACCAUUUUCAAGAGAAGCGGGCUCUGGGGUGGGAGGCU ........................................(......)...... (..(...................))...............(......)...... (..(.(................)))...............(......)...... >URS0000D69641_12908/1-54 GGUUGAGCAUUUUUUAUGCUUCAAGGAUCAGGUUUGCCAAGGGGUGAGGCAAAC .......................................(.....)........ (..(..................))...............(.....)........ (..(.(..............).))...............(.....)........ >URS0000D670BB_858215/1-53 GGUUGAGCAAGAUUUUCUUGCUUCAAGAUUUUUGGCUUCUAGGGUGGGAAGCU .......................................(......)...... (..(...................))..............(......)...... (..(.(...............).))..............(......)...... >URS0000D6B160_945021/1-46 GGUUGAGCGCAAGCUUUCAAGACAUGUCUUCCAAGGGUGAGGAAGU ................................(......)...... (..(..............))............(......)...... (..(.(..........).))............(......)...... >URS0000D66950_580327/1-53 GGUUGAGCAAGAUUUUCUUGCUUCAAGAUUUUUGGCUUCCAGGGUGGGAAGCU .......................................(......)...... (..(...................))..............(......)...... (..(.(...............).))..............(......)...... >URS0000D6BD70_12908/1-44 GGUUGGGCGCAAGCUUCAAGACAUAUCUCCAAGGGUGAGGAGAU ..............................(......)...... (..(............))............(......)...... (..(.(........).))............(......)...... >URS0000D684C8_872326/1-49 GGUUGGAGUUUCAAAACUUUCAAGAUUUUGCUUCUUUGGGUCAAGAGGC ...................................(......)...... (..(.................))............(......)...... (..(.(............)))..............(......)...... >URS0000D6C3FB_12908/1-50 GGUUGGACGUUUUAUACGUUUUCAAGAUUCUGCUUCUUGGGUGGGAAGCC ....................................(......)...... (..(.................)).............(......)...... (..(.(.............).)).............(......)...... >URS0000D6CD68_12908/1-49 GGUUGGGCAGGAACUGCUUCAAGAUGAUUGGCUUAUUGGGUGGGGAGCU ........................................(.....).. (..(.................)).................(.....).. (..(.(.............)))..................(.....).. >URS0000D69B25_12908/1-50 GGUUGGGCAGGCAACUGCUUUCAAGUUUUGAGCUUUAAGGGUGGGGGGCU .........................................(.....).. (..(..................)..)...............(.....).. (..(.(............).))...................(.....).. >URS0000D65CF6_12908/1-55 GGUUGGGCAGUUUGUAUAAACUGUUUCAAGUUUUUGAGCUUUAGGGUGGAGAGCU ..........................................(.....)...... (..(....................))................(.....)...... (..(.(..................)))...............(.....)...... >URS0000D67B94_991791/1-56 GGUUGAGCAAAUUUAUAUUUGUUUUCAAGAGCUUUGAAUUUCUGGGGUGGGAAAUU ..........................................(......)...... (..(....................).)...............(......)...... (..(.(................).))................(......)...... >URS0000D6D0EF_641107/1-56 GGUUGGGCAAAUUAUAUAAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAACU ..........................................(......)...... (..(.....................))...............(......)...... (..(.(..................).))..............(......)...... >URS0000D6A9E8_1196322/1-54 GGUUGGACAAAUUUAUAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAACU ........................................(......)...... (..(...................))...............(......)...... (..(.(................).))..............(......)...... >URS0000D6C7DC_748727/1-59 GGUUGGACAAAUAUUUAUUUGUUUUCAAGAUGAUAAUAUGACUUUUGGGGUGGAAAGUC .............................................(......)...... (..(....................)..).................(......)...... (..(.(................).))...................(......)...... >URS0000D6877A_431943/1-57 GGUUGAACAAAUUUUAAUUUGAUUUCAAGAUAAAUAUGACUUUUAGGGUGGAAAGUC ...........................................(......)...... (..(....................)..)...............(......)...... (..(.(................).)).................(......)...... >URS0000D6BF2A_545243/1-57 GGUUGGACAAAUAAUUUAUUUGUUUUCAAGAGAUUAUGACUUUUGGGGUGGAAAGUA ...........................................(......)...... (..(.....................))................(......)...... (..(.(.................).))................(......)...... >URS0000D69104_290402/1-56 GGUUGGGCAAAUUAUAUAAUUUGUUUUCAAGCAAUUAGUUUCUGGGGUGGGAAGCU ..........................................(......)...... (..(.....................))...............(......)...... (..(.(..................).))..............(......)...... >URS0000D6747F_768486/1-50 GGUUGGGCAUAAUGCUUCAAGGAUCGCGUUCUUCAAGGGGUGAGAAGAAC ...................................(.....)........ (..(...............))..............(.....)........ (..(.(.........)...))..............(.....)........ >URS0000D6BBBA_12908/1-49 GGUUGGGCAGGUAACUGCUUUCAAGUUUUGAGCUUAAGGGUGGAAAGCU ....................................(.....)...... (..(................))..............(.....)...... (..(.(............).))..............(.....)...... >URS0000D66F1A_12908/1-59 GGUUGAACAAAUAAUUUUAUUUGAUUUCAAGAGUAGCAUGGCUUUUGGGGUGGAAAGUC .............................................(......)...... (..(......................)..)...............(......)...... (..(.(..................).)).................(......)...... >URS0000D661DC_12908/1-58 GGUUGGGUUUUUACACAAAAUAAAAACUUUCAAGAUUUGCUUAUUUGGGUCAAGAAGC ............................................(......)...... (..(.........................)).............(......)...... >URS0000D6892E_1423790/1-58 GGUUGGGUUUUUAGACAAUAAAAGCUUUCAAGAUUUCAGUCUCUUUGGGUCAGGAGAC ............................................(......)...... (..(.......................))...............(......)...... >URS0000D69A9C_12908/1-49 GGUUGGAGCAUUUAAAGCUUUCAAGAUAUGCUUAUUUGGGUCAAUAAGC ...................................(......)...... (..(.................))............(......)...... >URS0000D66394_596325/1-48 GGUUGGAGUUUAAAAGCUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC ..................................(......)...... (..(................))............(......)...... >URS0000D6A7AB_12908/1-47 GGUUGGGCGUAUUGCUUUCAAGAUGUUGCCUUUUUGGGUGAGGGGGC .................................(......)...... (..(...............))............(......)...... >URS0000D6B61F_333990/1-48 GGUUGGGCAUUUGCUUUCAAGGAUAAAUUCUUCAAGGGGUGAGAAGAA ..................................(.....)....... (..(..............))..............(.....)....... >URS0000D6AF81_12908/1-47 GGUUGGGCGUAUUGCUUUCAAGAUGUGGCCUUUUUGGGUGAGGGGGC .................................(......)...... (..(.............))..............(......)...... >URS0000D657A0_695560/1-58 GGUUGGGUUUUUACACAAAAUAAAAACUUUCAAGAUUUGCUUCUUUGGGUCAAGAAGC ............................................(......)...... (..(.........................)).............(......)...... >URS0000D6671F_1196322/1-58 GGUUGGGCAAAUUUUAUUGUUUGCUUUCAAGCAAUUUUAGUUUCUGGGGUGGGAAACU ............................................(......)...... (..(......................))................(......)...... >URS0000D6B06A_641107/1-57 GGUUGGGCAAAUUCUACGAUUUGCUUUCAAGCAAUUUAGUUUCUGGGGUGGGAAACU ...........................................(......)...... (..(......................))...............(......)...... >URS0000D6AAFA_536227/1-56 GGUUGAACAAAUUUUUAUUUGAUUUCAAGAGAAUUUGACUUUUGGGGUGGGAAGUC ..........................................(......)...... (..(....................).)...............(......)...... >URS0000D6ACB1_353496/1-49 GGUUGGAGUUUCAAAACUUUCAAGAAAAAGCUUCUUUGGGUCAAGGAGC ...................................(......)...... (..(.................))............(......)...... >URS0000D6AF39_12908/1-63 GGUUGGGCGGUGCUGCUUUUGAAGGUGCCGUUUUCAAGAAAUUUGCUUUUUGGGUGGAAAGCU .................................................(......)...... >URS0000D69607_370438/1-60 UGUUGGACGAACCUGUCCGGGUUCGUUUUCAAGGUUUGAAGGCUUCUGGGGUGGGAAGUC ..............................................(......)...... >URS0000D6CD0D_12908/1-64 GGUUGGGCAAACGCUGUGCAUUCAGCCGUUUGUUUUCAAGACCUAAAGCUUAAGGGUGGAAGCU ...................................................(......)..... >URS0000D6841B_370438/1-58 UGUUGGACGAAUUUUUUCGAUUCGUUUUCAAGGAUUCAGGCUUCUGGGGUGGGAAGUC ............................................(......)...... >URS0000D659FD_12908/1-59 GGUCGAGCGGAUAAAGGUGUCCGCAUUCGAGAUAAAUAAAGCUUCUGGGGCGGGAAGCU .............................................(......)...... >URS0000D68BD0_485916/1-66 GGCUGGGCGAGUUAAUUUGUAUUUAUUCGCUUUCACAAGUGAUUUACGACUUCUGGGUGGGAAGCC .....................................................(.....)......

	ORB			p-value	ORB frequency (per structure per nucleotide)	Means ratio
1	(.GGGNN.)			< 0.001		102

URS0000D68C16_12908/1-55 GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU .........1.........2.........3.........4.........5..... 1234567890123456789012345678901234567890123456789012345
2	G(GU(U))			< 0.001		100

URS0000D68C16_12908/1-55 GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU .........1.........2.........3.........4.........5..... 1234567890123456789012345678901234567890123456789012345
3	U(G(R))			< 0.001		2.69

URS0000D68C16_12908/1-55 GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU .........1.........2.........3.........4.........5..... 1234567890123456789012345678901234567890123456789012345
4	A(NNY)N			< 0.001		1.52

URS0000D68C16_12908/1-55 GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU .........1.........2.........3.........4.........5..... 1234567890123456789012345678901234567890123456789012345
	ORB			p-value	ORB frequency (per structure per nucleotide)	Means ratio

	NCM			p-value	NCM frequency (per structure per nucleotide)	Means ratio
1	(.GGGNN.)			< 0.001		102

URS0000D68C16_12908/1-55 GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU GGUUGGGGGAAUUGAUUAUUCUCUUCAAGAGAUACGGCUUUUGGGGUGGAAAGCU .........1.........2.........3.........4.........5..... 1234567890123456789012345678901234567890123456789012345
	NCM			p-value	NCM frequency (per structure per nucleotide)	Means ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).