D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major
D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences
J. Mol. Biol., 435 (2023)

mir-199 microRNA precursor   (Rfam: RF00144)


Options
Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN
Rfam
D-ORB
Augmented

(AY()U)
((G)C)A
((G)U)U
(C()U)
(.N.().C.)
(.YNNYR.)

95.0
100.0
100.0
100.0
100.0
85.0

((G)C)A
((G)U)U
(C()U)
(.YNNYR.)

% of positive sequence with ORB






Deep neural network:

5-fold cross-validation: 99.3 %
(± 0.163 %)

Decision tree:

5-fold cross-validation: 91.9 %
(± 2.55 %)

D-ORB structure
D-ORB structure decision tree:

5-fold cross-validation: 92.9 %
(± 5.44 %)
of BAAF04061048.1/5562-5661
BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
..(.((((((((((.(((((.(((((((.((((((..((((((((((......)))))))))).)))))).))))))).))))).)))))))))).)...
...................................................................................................1
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890

abstract shape: ()

Number of sequences
Structure ORBs (out of 40) (%)
1 (AY()U)
38 95.0
>AANH01004681.1/136443-136347
UAGUCGCCCAGCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGCCGGGGAAGCA
.................................(..(........................).).................................
>CAAA01166376.1/6652-6752
UGAACAGCCAUCCCCGCCAUCCCAGUGUUCAGACUACCUGUUCAGGAGGCUGGGACAUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGCCAGCA
..................................(..(.........................).)...................................
>CAAB02006614.1/142324-142226
UUCACUCCCCGUCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAGACUAAAGCUGAACAGUAGUCUGCACAUUGGUUAAGCUGGGUUGGGACACAC
..................................(..(........................).)..................................
>CU138550.14/80968-81064
UGGACGCCCGUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAUUAGUGUUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGAUGGGGAUGCU
.................................(..(........................).).................................
>BAAF04022833.1/5094-5192
UCUAUCCCCCACCCCGCCUGCCCAGUGUUCAGACUACCUGUUCCUCCAGCUAUAACUGAACAGUAGUCUGCACAUUGGUUAGGCUAGACUGGGAGCCAC
..................................(..(........................).)..................................
>CAAE01011305.1/260-162
CUCACUCCCCACCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAGACUCAAGCUGAACAGUAGUCUGCACAUUGGUUAUGCAGAGUUGGGACACAC
..................................(..(........................).)..................................
>BX088529.6/78677-78581
UUGCCUCCCCCUCGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAUGCUGCAGCUGAACAGUAGUCCGCACAUUGGUUAGGCUGGGCUGGGACACAC
................................(..(........................).)..................................
>AAFR03046507.1/3724-3626
AACAGACUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCAAUAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGCUACAC
..................................(..(........................).)..................................
>CU929237.12/85511-85412
CCUCGUGCCCGCUCUGCUUUCCCAGUGUUCAGACUACCUGUUCAGGGCGUAGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGAGUGAGGGCUGCAC
..................................(..(........................).)...................................
>BAAE01013242.1/84-183
CCCUCCCCCCAUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGUUAGGGAAGUGCG
..................................(..(........................).)...................................
>AAWZ02032658.1/17347-17445
AGAGCCUCCACUCCGUCUGCCCAGUGUUCGGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUAUACC
.................................(..(........................).)...................................
>AAWR02017790.1/21207-21308
UGGACAGCCGGCCCCGCCCGCCCAGUGUUCAGACUACCUGUUCAGGGGGCUCCGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCCUGGGCAGCGG
..................................(..(..........................).)...................................
>AGAI01054814.1/40458-40555
AGAGGCUCCACUCCGUCUGCCCAGUGUUCAGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUACAC
.................................(..(........................).)..................................
>AL137157.7/19246-19147
UGGAGAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGGAGAGCA
..................................(..(........................).)...................................
>BAAE01184372.1/319-221
UCUAUCCCCCACCCCGCCUGCCCAGUGUUCAGACUACCUGUUCCUCCAGCUACAACUGAACAGUAGUCUGCACAUUGGUUAGGCUAGACUGGGAGCCAC
..................................(..(........................).)..................................
>CAAE01014542.1/504358-504259
CCUCCACCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCACGGACCCUCG
..................................(..(........................).)...................................
>AAVX01256932.1/291-390
AAAAGGUCCUGCUCCGUCGGCCCAGUGUUCAGACUACCUGUUCAGGACAAUAUUGUUGUACAGUAGUCUGCACAUUGGUUAGAUUGGGCAUGGGAAAGCA
..................................(..(........................).)...................................
>BAAF04076833.1/4729-4828
AAGGCAUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGAAUCUUCCUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGAAGUAUC
..................................(..(........................).)...................................
>AAFR03049221.1/24866-24967
UCAAAUUCCAGCCCCACCAGCCCAGUGUUCAGACUACCUGUCCAGGAGAUUGCAAAGGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGAAAAGCA
..................................(..(..........................).)...................................
>AAHX01020762.1/284-188
AGGAUACCUCCCCGUCUACCCAGUGUUUAGACUACCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGAC
................................(..(........................).)..................................
>AL590708.18/146131-146032
AGGACACCUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGAC
...................................(..(........................).)..................................
>CT563248.9/85109-85010
ACUAUCUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGGAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGACUCCCG
..................................(..(........................).)...................................
>CAAB02001273.1/56306-56405
AGAAGCUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGGAUUUUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACAGUGCAUGGAAGUGCA
..................................(..(........................).)...................................
>AAWZ02037129.1/4059-4158
ACCAAAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCUGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGAAACGCA
..................................(..(........................).)...................................
>AAKN02056464.1/56517-56417
CGGACACCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGCGCCUCUGCAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGCGUGCA
.................................(..(..........................).)...................................
>AAGU03050830.1/254-354
CAGACAGCCGGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGUUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGCGAUCG
..................................(..(.........................).)...................................
>AAPE02018251.1/211838-211739
UGGAGCUCCUGCCCCGUCGGCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGCACAGCA
..................................(..(........................).)...................................
>BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
..................................(..(........................).)...................................
>ABDC01156515.1/926-826
CAGACAGCCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGGGCUGCUGCACGCGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGCGAGCG
..................................(..(..........................).)..................................
>AAWZ02011103.1/105677-105577
AGGAGACCAGCCCCGCCUUCCCAGUGUUCAGACUACCUGUUCAGGAAGCUACAAAGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCUUGGGUGAGCA
.................................(..(..........................).)...................................
>AAPE02052565.1/37992-38093
UGGACAGCCAGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGGCUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGCCAGCA
..................................(..(..........................).)...................................
>AC007229.1/16746-16645
UGGAUAGCCGGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGAGGCUCUCAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGUGAGCG
..................................(..(..........................).)...................................
>AANH01005434.1/24491-24590
CGCAACUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAUGGACCGUCU
..................................(..(........................).)...................................
>AANH01004317.1/876-974
CCGCCCCCCCCCCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCCGGCUACAGCUGAACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGACACGC
..................................(..(........................).)..................................
>AANG01185125.1/363-262
CGGACAGCCGGCCCCGCCCACCCAGUGUUCAGACUACCUGUUCAGGGGGUUCAGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGUAAGCG
..................................(..(..........................).)...................................
>AAQR03140752.1/13262-13361
GAGACAGCCAGCCAUGCCAGCCCAGCGUUCAGACCACCUGUGCAGGAGCCUCUGAGUGCACAGUAGUUUACACAUUGGUUCGGCCAAGCCAGGUGAGCAG
..................................(..(........................).)...................................
>CAAE01014575.1/64714-64811
UGUCCACCCAGCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGCCCGGGUAAGCA
.................................(..(........................).)..................................
>AAYZ01174210.1/140-40
GACACCUCCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUUAGGCUGGGCUGGGCUAGACC
..................................(..(........................).)....................................
2 (AY()U)
((G)C)A
37 92.5
>CAAE01011305.1/260-162
CUCACUCCCCACCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAGACUCAAGCUGAACAGUAGUCUGCACAUUGGUUAUGCAGAGUUGGGACACAC
...........................(.(....(..(........................).)....).)...........................
>BAAF04022833.1/5094-5192
UCUAUCCCCCACCCCGCCUGCCCAGUGUUCAGACUACCUGUUCCUCCAGCUAUAACUGAACAGUAGUCUGCACAUUGGUUAGGCUAGACUGGGAGCCAC
...........................(.(....(..(........................).)....).)...........................
>BAAF04076833.1/4729-4828
AAGGCAUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGAAUCUUCCUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGAAGUAUC
...........................(.(....(..(........................).)....).)............................
>AAVX01256932.1/291-390
AAAAGGUCCUGCUCCGUCGGCCCAGUGUUCAGACUACCUGUUCAGGACAAUAUUGUUGUACAGUAGUCUGCACAUUGGUUAGAUUGGGCAUGGGAAAGCA
...........................(.(....(..(........................).)....).)............................
>AL137157.7/19246-19147
UGGAGAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGGAGAGCA
...........................(.(....(..(........................).)....).)............................
>AL590708.18/146131-146032
AGGACACCUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGAC
............................(.(....(..(........................).)....).)...........................
>CAAB02001273.1/56306-56405
AGAAGCUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGGAUUUUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACAGUGCAUGGAAGUGCA
...........................(.(....(..(........................).)....).)............................
>BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
...........................(.(....(..(........................).)....).)............................
>ABDC01156515.1/926-826
CAGACAGCCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGGGCUGCUGCACGCGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGCGAGCG
...........................(.(....(..(..........................).)....).)...........................
>AGAI01054814.1/40458-40555
AGAGGCUCCACUCCGUCUGCCCAGUGUUCAGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUACAC
..........................(.(....(..(........................).)....).)...........................
>AAWZ02032658.1/17347-17445
AGAGCCUCCACUCCGUCUGCCCAGUGUUCGGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUAUACC
..........................(.(....(..(........................).)....).)............................
>AAWZ02011103.1/105677-105577
AGGAGACCAGCCCCGCCUUCCCAGUGUUCAGACUACCUGUUCAGGAAGCUACAAAGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCUUGGGUGAGCA
..........................(.(....(..(..........................).)....).)............................
>AANH01004681.1/136443-136347
UAGUCGCCCAGCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGCCGGGGAAGCA
..........................(.(....(..(........................).)....).)..........................
>AC007229.1/16746-16645
UGGAUAGCCGGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGAGGCUCUCAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGUGAGCG
...........................(.(....(..(..........................).)....).)............................
>AAHX01020762.1/284-188
AGGAUACCUCCCCGUCUACCCAGUGUUUAGACUACCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGAC
.........................(.(....(..(........................).)....).)...........................
>BAAE01013242.1/84-183
CCCUCCCCCCAUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGUUAGGGAAGUGCG
...........................(.(....(..(........................).)....).)............................
>AANH01004317.1/876-974
CCGCCCCCCCCCCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCCGGCUACAGCUGAACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGACACGC
...........................(.(....(..(........................).)....).)...........................
>AAPE02052565.1/37992-38093
UGGACAGCCAGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGGCUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGCCAGCA
...........................(.(....(..(..........................).)....).)............................
>CAAB02006614.1/142324-142226
UUCACUCCCCGUCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAGACUAAAGCUGAACAGUAGUCUGCACAUUGGUUAAGCUGGGUUGGGACACAC
...........................(.(....(..(........................).)....).)...........................
>AAWR02017790.1/21207-21308
UGGACAGCCGGCCCCGCCCGCCCAGUGUUCAGACUACCUGUUCAGGGGGCUCCGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCCUGGGCAGCGG
...........................(.(....(..(..........................).)....).)............................
>AAGU03050830.1/254-354
CAGACAGCCGGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGUUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGCGAUCG
...........................(.(....(..(.........................).)....).)............................
>AAKN02056464.1/56517-56417
CGGACACCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGCGCCUCUGCAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGCGUGCA
..........................(.(....(..(..........................).)....).)............................
>CAAE01014575.1/64714-64811
UGUCCACCCAGCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGCCCGGGUAAGCA
..........................(.(....(..(........................).)....).)...........................
>AANH01005434.1/24491-24590
CGCAACUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAUGGACCGUCU
...........................(.(....(..(........................).)....).)............................
>AANG01185125.1/363-262
CGGACAGCCGGCCCCGCCCACCCAGUGUUCAGACUACCUGUUCAGGGGGUUCAGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGUAAGCG
...........................(.(....(..(..........................).)....).)............................
>AAFR03046507.1/3724-3626
AACAGACUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCAAUAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGCUACAC
...........................(.(....(..(........................).)....).)...........................
>CU138550.14/80968-81064
UGGACGCCCGUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAUUAGUGUUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGAUGGGGAUGCU
..........................(.(....(..(........................).)....).)..........................
>BAAE01184372.1/319-221
UCUAUCCCCCACCCCGCCUGCCCAGUGUUCAGACUACCUGUUCCUCCAGCUACAACUGAACAGUAGUCUGCACAUUGGUUAGGCUAGACUGGGAGCCAC
...........................(.(....(..(........................).)....).)...........................
>AAYZ01174210.1/140-40
GACACCUCCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUUAGGCUGGGCUGGGCUAGACC
...........................(.(....(..(........................).)....).).............................
>CT563248.9/85109-85010
ACUAUCUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGGAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGACUCCCG
...........................(.(....(..(........................).)....).)............................
>CAAE01014542.1/504358-504259
CCUCCACCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCACGGACCCUCG
...........................(.(....(..(........................).)....).)............................
>AAWZ02037129.1/4059-4158
ACCAAAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCUGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGAAACGCA
...........................(.(....(..(........................).)....).)............................
>AAFR03049221.1/24866-24967
UCAAAUUCCAGCCCCACCAGCCCAGUGUUCAGACUACCUGUCCAGGAGAUUGCAAAGGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGAAAAGCA
...........................(.(....(..(..........................).)....).)............................
>CAAA01166376.1/6652-6752
UGAACAGCCAUCCCCGCCAUCCCAGUGUUCAGACUACCUGUUCAGGAGGCUGGGACAUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGCCAGCA
...........................(.(....(..(.........................).)....).)............................
>BX088529.6/78677-78581
UUGCCUCCCCCUCGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAUGCUGCAGCUGAACAGUAGUCCGCACAUUGGUUAGGCUGGGCUGGGACACAC
.........................(.(....(..(........................).)....).)...........................
>AAPE02018251.1/211838-211739
UGGAGCUCCUGCCCCGUCGGCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGCACAGCA
...........................(.(....(..(........................).)....).)............................
>CU929237.12/85511-85412
CCUCGUGCCCGCUCUGCUUUCCCAGUGUUCAGACUACCUGUUCAGGGCGUAGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGAGUGAGGGCUGCAC
...........................(.(....(..(........................).)....).)............................
3 (AY()U)
((G)C)A
((G)U)U
37 92.5
>BAAF04022833.1/5094-5192
UCUAUCCCCCACCCCGCCUGCCCAGUGUUCAGACUACCUGUUCCUCCAGCUAUAACUGAACAGUAGUCUGCACAUUGGUUAGGCUAGACUGGGAGCCAC
...................(.(.....(.(....(..(........................).)....).).....).)...................
>CU138550.14/80968-81064
UGGACGCCCGUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAUUAGUGUUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGAUGGGGAUGCU
..................(.(.....(.(....(..(........................).)....).).....).)..................
>CAAE01014542.1/504358-504259
CCUCCACCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCACGGACCCUCG
...................(.(.....(.(....(..(........................).)....).).....).)....................
>BX088529.6/78677-78581
UUGCCUCCCCCUCGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAUGCUGCAGCUGAACAGUAGUCCGCACAUUGGUUAGGCUGGGCUGGGACACAC
.................(.(.....(.(....(..(........................).)....).).....).)...................
>CAAE01011305.1/260-162
CUCACUCCCCACCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAGACUCAAGCUGAACAGUAGUCUGCACAUUGGUUAUGCAGAGUUGGGACACAC
...................(.(.....(.(....(..(........................).)....).).....).)...................
>CAAB02006614.1/142324-142226
UUCACUCCCCGUCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAGACUAAAGCUGAACAGUAGUCUGCACAUUGGUUAAGCUGGGUUGGGACACAC
...................(.(.....(.(....(..(........................).)....).).....).)...................
>AAYZ01174210.1/140-40
GACACCUCCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUUAGGCUGGGCUGGGCUAGACC
....................((.....(.(....(..(........................).)....).).....).).....................
>CAAA01166376.1/6652-6752
UGAACAGCCAUCCCCGCCAUCCCAGUGUUCAGACUACCUGUUCAGGAGGCUGGGACAUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGCCAGCA
....................((.....(.(....(..(.........................).)....).).....).)....................
>AAVX01256932.1/291-390
AAAAGGUCCUGCUCCGUCGGCCCAGUGUUCAGACUACCUGUUCAGGACAAUAUUGUUGUACAGUAGUCUGCACAUUGGUUAGAUUGGGCAUGGGAAAGCA
...................(.(.....(.(....(..(........................).)....).).....).)....................
>AAPE02018251.1/211838-211739
UGGAGCUCCUGCCCCGUCGGCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGCACAGCA
...................(.(.....(.(....(..(........................).)....).).....).)....................
>AAFR03049221.1/24866-24967
UCAAAUUCCAGCCCCACCAGCCCAGUGUUCAGACUACCUGUCCAGGAGAUUGCAAAGGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGAAAAGCA
...................(.(.....(.(....(..(..........................).)....).).....).)....................
>CU929237.12/85511-85412
CCUCGUGCCCGCUCUGCUUUCCCAGUGUUCAGACUACCUGUUCAGGGCGUAGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGAGUGAGGGCUGCAC
...................(.(.....(.(....(..(........................).)....).).....).)....................
>ABDC01156515.1/926-826
CAGACAGCCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGGGCUGCUGCACGCGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGCGAGCG
...................(.(.....(.(....(..(..........................).)....).).....).)...................
>AANH01004681.1/136443-136347
UAGUCGCCCAGCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGCCGGGGAAGCA
..................(.(.....(.(....(..(........................).)....).).....).)..................
>AANH01004317.1/876-974
CCGCCCCCCCCCCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCCGGCUACAGCUGAACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGACACGC
...................(.(.....(.(....(..(........................).)....).).....).)...................
>CAAB02001273.1/56306-56405
AGAAGCUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGGAUUUUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACAGUGCAUGGAAGUGCA
....................((.....(.(....(..(........................).)....).).....).)....................
>AL590708.18/146131-146032
AGGACACCUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGAC
....................(.(.....(.(....(..(........................).)....).).....).)...................
>BAAF04076833.1/4729-4828
AAGGCAUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGAAUCUUCCUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGAAGUAUC
....................((.....(.(....(..(........................).)....).).....).)....................
>AC007229.1/16746-16645
UGGAUAGCCGGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGAGGCUCUCAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGUGAGCG
...................(.(.....(.(....(..(..........................).)....).).....).)....................
>BAAE01013242.1/84-183
CCCUCCCCCCAUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGUUAGGGAAGUGCG
...................(.(.....(.(....(..(........................).)....).).....).)....................
>AAWR02017790.1/21207-21308
UGGACAGCCGGCCCCGCCCGCCCAGUGUUCAGACUACCUGUUCAGGGGGCUCCGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCCUGGGCAGCGG
...................(.(.....(.(....(..(..........................).)....).).....).)....................
>AAHX01020762.1/284-188
AGGAUACCUCCCCGUCUACCCAGUGUUUAGACUACCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGAC
.................(.(.....(.(....(..(........................).)....).).....).)...................
>AANG01185125.1/363-262
CGGACAGCCGGCCCCGCCCACCCAGUGUUCAGACUACCUGUUCAGGGGGUUCAGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGUAAGCG
...................(.(.....(.(....(..(..........................).)....).).....).)....................
>BAAE01184372.1/319-221
UCUAUCCCCCACCCCGCCUGCCCAGUGUUCAGACUACCUGUUCCUCCAGCUACAACUGAACAGUAGUCUGCACAUUGGUUAGGCUAGACUGGGAGCCAC
...................(.(.....(.(....(..(........................).)....).).....).)...................
>AAKN02056464.1/56517-56417
CGGACACCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGCGCCUCUGCAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGCGUGCA
..................(.(.....(.(....(..(..........................).)....).).....).)....................
>CAAE01014575.1/64714-64811
UGUCCACCCAGCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGCCCGGGUAAGCA
..................(.(.....(.(....(..(........................).)....).).....).)...................
>AANH01005434.1/24491-24590
CGCAACUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAUGGACCGUCU
...................(.(.....(.(....(..(........................).)....).).....).)....................
>AL137157.7/19246-19147
UGGAGAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGGAGAGCA
...................(.(.....(.(....(..(........................).)....).).....).)....................
>AAGU03050830.1/254-354
CAGACAGCCGGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGUUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGCGAUCG
...................(.(.....(.(....(..(.........................).)....).).....).)....................
>AAFR03046507.1/3724-3626
AACAGACUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCAAUAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGCUACAC
...................(.(.....(.(....(..(........................).)....).).....).)...................
>BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
...................(.(.....(.(....(..(........................).)....).).....).)....................
>AAWZ02011103.1/105677-105577
AGGAGACCAGCCCCGCCUUCCCAGUGUUCAGACUACCUGUUCAGGAAGCUACAAAGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCUUGGGUGAGCA
..................(.(.....(.(....(..(..........................).)....).).....).)....................
>CT563248.9/85109-85010
ACUAUCUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGGAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGACUCCCG
....................((.....(.(....(..(........................).)....).).....).)....................
>AAPE02052565.1/37992-38093
UGGACAGCCAGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGGCUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGCCAGCA
...................(.(.....(.(....(..(..........................).)....).).....).)....................
>AAWZ02037129.1/4059-4158
ACCAAAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCUGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGAAACGCA
...................(.(.....(.(....(..(........................).)....).).....).)....................
>AGAI01054814.1/40458-40555
AGAGGCUCCACUCCGUCUGCCCAGUGUUCAGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUACAC
..................(.(.....(.(....(..(........................).)....).).....).)...................
>AAWZ02032658.1/17347-17445
AGAGCCUCCACUCCGUCUGCCCAGUGUUCGGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUAUACC
..................(.(.....(.(....(..(........................).)....).).....).)....................
4 (AY()U)
((G)C)A
((G)U)U
(C()U)
35 87.5
>AANH01004681.1/136443-136347
UAGUCGCCCAGCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGCCGGGGAAGCA
............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)............
>CAAB02006614.1/142324-142226
UUCACUCCCCGUCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAGACUAAAGCUGAACAGUAGUCUGCACAUUGGUUAAGCUGGGUUGGGACACAC
........(.(........(.(.....(.(....(..(........................).)....).).....).)........).)........
>AAPE02052565.1/37992-38093
UGGACAGCCAGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGGCUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGCCAGCA
.............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..............
>CU138550.14/80968-81064
UGGACGCCCGUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAUUAGUGUUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGAUGGGGAUGCU
............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)............
>AAYZ01174210.1/140-40
GACACCUCCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUUAGGCUGGGCUGGGCUAGACC
.............(.(....((.....(.(....(..(........................).)....).).....).)....).)..............
>BAAF04076833.1/4729-4828
AAGGCAUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGAAUCUUCCUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGAAGUAUC
.............(.(....((.....(.(....(..(........................).)....).).....).)...).)..............
>AAHX01020762.1/284-188
AGGAUACCUCCCCGUCUACCCAGUGUUUAGACUACCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGAC
...........(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
>BAAF04022833.1/5094-5192
UCUAUCCCCCACCCCGCCUGCCCAGUGUUCAGACUACCUGUUCCUCCAGCUAUAACUGAACAGUAGUCUGCACAUUGGUUAGGCUAGACUGGGAGCCAC
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
>AANH01004317.1/876-974
CCGCCCCCCCCCCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCCGGCUACAGCUGAACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGACACGC
........(.(........(.(.....(.(....(..(........................).)....).).....).)........).)........
>BAAE01184372.1/319-221
UCUAUCCCCCACCCCGCCUGCCCAGUGUUCAGACUACCUGUUCCUCCAGCUACAACUGAACAGUAGUCUGCACAUUGGUUAGGCUAGACUGGGAGCCAC
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
>AAWZ02037129.1/4059-4158
ACCAAAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCUGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGAAACGCA
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..............
>AL590708.18/146131-146032
AGGACACCUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGAC
..............(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
>AC007229.1/16746-16645
UGGAUAGCCGGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGAGGCUCUCAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGUGAGCG
.............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..............
>AAFR03049221.1/24866-24967
UCAAAUUCCAGCCCCACCAGCCCAGUGUUCAGACUACCUGUCCAGGAGAUUGCAAAGGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGAAAAGCA
.............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..............
>CAAE01011305.1/260-162
CUCACUCCCCACCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAGACUCAAGCUGAACAGUAGUCUGCACAUUGGUUAUGCAGAGUUGGGACACAC
................(.((.(.....(.(....(..(........................).)....).).....).)).)................
>AAGU03050830.1/254-354
CAGACAGCCGGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGUUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGCGAUCG
.............(.(...(.(.....(.(....(..(.........................).)....).).....).)...).)..............
>CAAE01014542.1/504358-504259
CCUCCACCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCACGGACCCUCG
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..............
>AAWZ02011103.1/105677-105577
AGGAGACCAGCCCCGCCUUCCCAGUGUUCAGACUACCUGUUCAGGAAGCUACAAAGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCUUGGGUGAGCA
............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..............
>AANG01185125.1/363-262
CGGACAGCCGGCCCCGCCCACCCAGUGUUCAGACUACCUGUUCAGGGGGUUCAGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGUAAGCG
.............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..............
>AAFR03046507.1/3724-3626
AACAGACUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCAAUAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGCUACAC
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
>AAVX01256932.1/291-390
AAAAGGUCCUGCUCCGUCGGCCCAGUGUUCAGACUACCUGUUCAGGACAAUAUUGUUGUACAGUAGUCUGCACAUUGGUUAGAUUGGGCAUGGGAAAGCA
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..............
>BAAE01013242.1/84-183
CCCUCCCCCCAUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGUUAGGGAAGUGCG
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..............
>ABDC01156515.1/926-826
CAGACAGCCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGGGCUGCUGCACGCGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGCGAGCG
.............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).).............
>AL137157.7/19246-19147
UGGAGAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGGAGAGCA
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..............
>AAWR02017790.1/21207-21308
UGGACAGCCGGCCCCGCCCGCCCAGUGUUCAGACUACCUGUUCAGGGGGCUCCGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCCUGGGCAGCGG
.............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..............
>CAAE01014575.1/64714-64811
UGUCCACCCAGCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGCCCGGGUAAGCA
............(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
>AAPE02018251.1/211838-211739
UGGAGCUCCUGCCCCGUCGGCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGCACAGCA
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..............
>CT563248.9/85109-85010
ACUAUCUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGGAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGACUCCCG
.............(.(....((.....(.(....(..(........................).)....).).....).)...).)..............
>BX088529.6/78677-78581
UUGCCUCCCCCUCGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAUGCUGCAGCUGAACAGUAGUCCGCACAUUGGUUAGGCUGGGCUGGGACACAC
...........(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
>AAKN02056464.1/56517-56417
CGGACACCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGCGCCUCUGCAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGCGUGCA
............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..............
>AGAI01054814.1/40458-40555
AGAGGCUCCACUCCGUCUGCCCAGUGUUCAGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUACAC
............(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
>BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..............
>AANH01005434.1/24491-24590
CGCAACUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAUGGACCGUCU
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..............
>AAWZ02032658.1/17347-17445
AGAGCCUCCACUCCGUCUGCCCAGUGUUCGGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUAUACC
............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..............
>CAAA01166376.1/6652-6752
UGAACAGCCAUCCCCGCCAUCCCAGUGUUCAGACUACCUGUUCAGGAGGCUGGGACAUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGCCAGCA
.............(.(....((.....(.(....(..(.........................).)....).).....).)...).)..............
5 (AY()U)
((G)C)A
((G)U)U
(C()U)
(.N.().C.)
29 72.5
>AAFR03046507.1/3724-3626
AACAGACUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCAAUAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGCUACAC
..(..(.......(.(...(.(.....(.(....(..(........................).)....).).....).)...).)........)..).
>AAYZ01174210.1/140-40
GACACCUCCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUUAGGCUGGGCUGGGCUAGACC
..(..(.......(.(....((.....(.(....(..(........................).)....).).....).)....).)......)...)...
>AGAI01054814.1/40458-40555
AGAGGCUCCACUCCGUCUGCCCAGUGUUCAGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUACAC
.(.(........(.(...(.(.....(.(....(..(........................).)....).).....).)...).)........)...)
>AAWZ02037129.1/4059-4158
ACCAAAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCUGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGAAACGCA
.(...(.......(.(...(.(.....(.(....(..(........................).)....).).....).)...).)........)..)..
>BAAF04022833.1/5094-5192
UCUAUCCCCCACCCCGCCUGCCCAGUGUUCAGACUACCUGUUCCUCCAGCUAUAACUGAACAGUAGUCUGCACAUUGGUUAGGCUAGACUGGGAGCCAC
..(..(.......(.(...(.(.....(.(....(..(........................).)....).).....).)...).)........)..).
>AAWR02017790.1/21207-21308
UGGACAGCCGGCCCCGCCCGCCCAGUGUUCAGACUACCUGUUCAGGGGGCUCCGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCCUGGGCAGCGG
.(..(........(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..........).).
>AANG01185125.1/363-262
CGGACAGCCGGCCCCGCCCACCCAGUGUUCAGACUACCUGUUCAGGGGGUUCAGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGUAAGCG
(..(.........(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..........)..)
>CU138550.14/80968-81064
UGGACGCCCGUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAUUAGUGUUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGAUGGGGAUGCU
.(..(.......(.(...(.(.....(.(....(..(........................).)....).).....).)...).)........)..)
>AAVX01256932.1/291-390
AAAAGGUCCUGCUCCGUCGGCCCAGUGUUCAGACUACCUGUUCAGGACAAUAUUGUUGUACAGUAGUCUGCACAUUGGUUAGAUUGGGCAUGGGAAAGCA
...(.(.......(.(...(.(.....(.(....(..(........................).)....).).....).)...).).........)...)
>AAWZ02032658.1/17347-17445
AGAGCCUCCACUCCGUCUGCCCAGUGUUCGGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUAUACC
.(.(........(.(...(.(.....(.(....(..(........................).)....).).....).)...).).........)...)
>AANH01005434.1/24491-24590
CGCAACUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAUGGACCGUCU
...(.(.......(.(...(.(.....(.(....(..(........................).)....).).....).)...).)........)..)..
>AL137157.7/19246-19147
UGGAGAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGGAGAGCA
..(.(........(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..........)..)
>CAAE01014542.1/504358-504259
CCUCCACCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCACGGACCCUCG
..(..(.......(.(...(.(.....(.(....(..(........................).)....).).....).)...).)........)...).
>AAPE02052565.1/37992-38093
UGGACAGCCAGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGGCUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGCCAGCA
..(..(.......(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)........)...).
>CT563248.9/85109-85010
ACUAUCUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGGAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGACUCCCG
..(..(.......(.(....((.....(.(....(..(........................).)....).).....).)...).)........)...).
>BAAE01013242.1/84-183
CCCUCCCCCCAUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGUUAGGGAAGUGCG
..(.(........(.(...(.(.....(.(....(..(........................).)....).).....).)...).).........)...)
>AAGU03050830.1/254-354
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.................................(..(........................).).................................
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UGGACGCCCGUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAUUAGUGUUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGAUGGGGAUGCU
.................................(..(........................).).................................
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>BX088529.6/78677-78581
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................................(..(........................).)..................................
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(.(........(.(...(.(.....(.(....(..(........(......)........).)....).).....).)...).)........)..).
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AACAGACUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCAAUAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGCUACAC
..................................(..(........................).)..................................
...........................(.(....(..(........................).)....).)...........................
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..(..(.......(.(...(.(.....(.(....(..(........(......)........).)....).).....).)...).)........)..).
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CCCUCCCCCCAUCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGUUAGGGAAGUGCG
..................................(..(........................).)...................................
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..(.(........(.(...(.(.....(.(....(..(........(.......).......).)....).).....).)...).).........)...)
>AAWZ02032658.1/17347-17445
AGAGCCUCCACUCCGUCUGCCCAGUGUUCGGACUACCUGUUCAGGACUACGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGUGCUGGGAUAUACC
.................................(..(........................).)...................................
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>AGAI01054814.1/40458-40555
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.................................(..(........................).)..................................
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>CAAE01014542.1/504358-504259
CCUCCACCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCACGGACCCUCG
..................................(..(........................).)...................................
...........................(.(....(..(........................).)....).)............................
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..................................(..(........................).)...................................
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...(.(.......(.(...(.(.....(.(....(..(........(......)........).)....).).....).)...).).........)...)
>AAFR03049221.1/24866-24967
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..................................(..(..........................).)...................................
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..(.(........(.(...(.(.....(.(....(..(........(........)........).)....).).....).)...).).........)...)
>AAWZ02037129.1/4059-4158
ACCAAAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCUGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGAAACGCA
..................................(..(........................).)...................................
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.(...(.......(.(...(.(.....(.(....(..(........(......)........).)....).).....).)...).)........)..)..
>BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
..................................(..(........................).)...................................
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..(.(........(.(...(.(.....(.(....(..(........(......)........).)....).).....).)...).)........).)...
>AAWZ02011103.1/105677-105577
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.................................(..(..........................).)...................................
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.(.(........(.(...(.(.....(.(....(..(........(........)........).)....).).....).)...).).........)...)
>AAPE02052565.1/37992-38093
UGGACAGCCAGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGGCUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGCCAGCA
..................................(..(..........................).)...................................
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>AC007229.1/16746-16645
UGGAUAGCCGGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGAGGCUCUCAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGUGAGCG
..................................(..(..........................).)...................................
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..(.(........(.(...(.(.....(.(....(..(........(........)........).)....).).....).)...).).........)...)
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CGCAACUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAUGGACCGUCU
..................................(..(........................).)...................................
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...(.(.......(.(...(.(.....(.(....(..(........(......)........).)....).).....).)...).)........)..)..
>CAAE01014575.1/64714-64811
UGUCCACCCAGCCCGCCUGCCCAGUGUUCAGACUACCUGUUCAGGAAGUAGUGGUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGCCCGGGUAAGCA
.................................(..(........................).)..................................
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..(.(.......(.(...(.(.....(.(....(..(........(.......).......).)....).).....).)...).)........)...)
>CAAA01166376.1/6652-6752
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..................................(..(.........................).)...................................
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>BAAF04022833.1/5094-5192
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UGGAGAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGGAGAGCA
..................................(..(........................).)...................................
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..(.(........(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..........)..)
>BAAE01184372.1/319-221
UCUAUCCCCCACCCCGCCUGCCCAGUGUUCAGACUACCUGUUCCUCCAGCUACAACUGAACAGUAGUCUGCACAUUGGUUAGGCUAGACUGGGAGCCAC
..................................(..(........................).)..................................
...........................(.(....(..(........................).)....).)...........................
...................(.(.....(.(....(..(........................).)....).).....).)...................
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
..(..(.......(.(...(.(.....(.(....(..(........................).)....).).....).)...).)........)..).
>CT563248.9/85109-85010
ACUAUCUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGGAUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGACUCCCG
..................................(..(........................).)...................................
...........................(.(....(..(........................).)....).)............................
....................((.....(.(....(..(........................).)....).).....).)....................
.............(.(....((.....(.(....(..(........................).)....).).....).)...).)..............
..(..(.......(.(....((.....(.(....(..(........................).)....).).....).)...).)........)...).
>AAKN02056464.1/56517-56417
CGGACACCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGCGCCUCUGCAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGCGUGCA
.................................(..(..........................).)...................................
..........................(.(....(..(..........................).)....).)............................
..................(.(.....(.(....(..(..........................).)....).).....).)....................
............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..............
..(.(.......(.(...(.(.....(.(....(..(..........................).)....).).....).)...).).......)....).
>AAGU03050830.1/254-354
CAGACAGCCGGCCCCGCCAACCCAGUGUUCAGACUACCUGUUCAGGGGUUCUGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGCGAUCG
..................................(..(.........................).)...................................
...........................(.(....(..(.........................).)....).)............................
...................(.(.....(.(....(..(.........................).)....).).....).)....................
.............(.(...(.(.....(.(....(..(.........................).)....).).....).)...).)..............
....(.(......(.(...(.(.....(.(....(..(.........................).)....).).....).)...).).......).)....
>AAPE02018251.1/211838-211739
UGGAGCUCCUGCCCCGUCGGCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGCACAGCA
..................................(..(........................).)...................................
...........................(.(....(..(........................).)....).)............................
...................(.(.....(.(....(..(........................).)....).).....).)....................
.............(.(...(.(.....(.(....(..(........................).)....).).....).)...).)..............
..(...(......(.(...(.(.....(.(....(..(........................).)....).).....).)...).)........)..)..
>ABDC01156515.1/926-826
CAGACAGCCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGGGCUGCUGCACGCGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGCGAGCG
..................................(..(..........................).)..................................
...........................(.(....(..(..........................).)....).)...........................
...................(.(.....(.(....(..(..........................).)....).).....).)...................
.............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).).............
...(.(.......(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)........)...)
>AANG01185125.1/363-262
CGGACAGCCGGCCCCGCCCACCCAGUGUUCAGACUACCUGUUCAGGGGGUUCAGAAUGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGGUAAGCG
..................................(..(..........................).)...................................
...........................(.(....(..(..........................).)....).)............................
...................(.(.....(.(....(..(..........................).)....).).....).)....................
.............(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..............
(..(.........(.(...(.(.....(.(....(..(..........................).)....).).....).)...).)..........)..)
>AAYZ01174210.1/140-40
GACACCUCCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUUAGGCUGGGCUGGGCUAGACC
..................................(..(........................).)....................................
...........................(.(....(..(........................).)....).).............................
....................((.....(.(....(..(........................).)....).).....).).....................
.............(.(....((.....(.(....(..(........................).)....).).....).)....).)..............
..(..(.......(.(....((.....(.(....(..(........................).)....).).....).)....).)......)...)...
>CAAB02006614.1/142324-142226
UUCACUCCCCGUCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAGACUAAAGCUGAACAGUAGUCUGCACAUUGGUUAAGCUGGGUUGGGACACAC
..................................(..(........................).)..................................
...........................(.(....(..(........................).)....).)...........................
...................(.(.....(.(....(..(........................).)....).).....).)...................
........(.(........(.(.....(.(....(..(........................).)....).).....).)........).)........
>CAAE01011305.1/260-162
CUCACUCCCCACCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCAGACUCAAGCUGAACAGUAGUCUGCACAUUGGUUAUGCAGAGUUGGGACACAC
..................................(..(........................).)..................................
...........................(.(....(..(........................).)....).)...........................
...................(.(.....(.(....(..(........................).)....).).....).)...................
................(.((.(.....(.(....(..(........................).)....).).....).)).)................
>BAAF04076833.1/4729-4828
AAGGCAUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGAAUCUUCCUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGUGCAUGGAAGUAUC
..................................(..(........................).)...................................
...........................(.(....(..(........................).)....).)............................
....................((.....(.(....(..(........................).)....).).....).)....................
.............(.(....((.....(.(....(..(........................).)....).).....).)...).)..............
>AAHX01020762.1/284-188
AGGAUACCUCCCCGUCUACCCAGUGUUUAGACUACCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGAC
................................(..(........................).)..................................
.........................(.(....(..(........................).)....).)...........................
.................(.(.....(.(....(..(........................).)....).).....).)...................
...........(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
>AL590708.18/146131-146032
AGGACACCUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGAC
...................................(..(........................).)..................................
............................(.(....(..(........................).)....).)...........................
....................(.(.....(.(....(..(........................).)....).).....).)...................
..............(.(...(.(.....(.(....(..(........................).)....).).....).)...).).............
>AANH01004317.1/876-974
CCGCCCCCCCCCCCUGCCUGCCCAGUGUUCAGACUACCUGUUCAUCCGGCUACAGCUGAACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGACACGC
..................................(..(........................).)..................................
...........................(.(....(..(........................).)....).)...........................
...................(.(.....(.(....(..(........................).)....).).....).)...................
........(.(........(.(.....(.(....(..(........................).)....).).....).)........).)........
>CU929237.12/85511-85412
CCUCGUGCCCGCUCUGCUUUCCCAGUGUUCAGACUACCUGUUCAGGGCGUAGAGAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGAGUGAGGGCUGCAC
..................................(..(........................).)...................................
...........................(.(....(..(........................).)....).)............................
...................(.(.....(.(....(..(........................).)....).).....).)....................
>CAAB02001273.1/56306-56405
AGAAGCUCCUGCUCCGUCAUCCCAGUGUUCAGACUACCUGUUCAGGAUUUUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACAGUGCAUGGAAGUGCA
..................................(..(........................).)...................................
...........................(.(....(..(........................).)....).)............................
....................((.....(.(....(..(........................).)....).).....).)....................
>AAQR03140752.1/13262-13361
GAGACAGCCAGCCAUGCCAGCCCAGCGUUCAGACCACCUGUGCAGGAGCCUCUGAGUGCACAGUAGUUUACACAUUGGUUCGGCCAAGCCAGGUGAGCAG
..................................(..(........................).)...................................

ORB p-value ORB frequency
(per structure per nucleotide)
Means
ratio
1 (AY()U) < 0.001 37.2
BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
...................................................................................................1
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
2 ((G)C)A < 0.001 3.7
BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
...................................................................................................1
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
3 ((G)U)U < 0.001 3.6
BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
...................................................................................................1
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
4 (C()U) < 0.001 4.85
BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
...................................................................................................1
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
5 (.N.().C.) < 0.001 1.88
BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
...................................................................................................1
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0
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6 (.YNNYR.) < 0.001 2.24
BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
...................................................................................................1
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
ORB p-value ORB frequency
(per structure per nucleotide)
Means
ratio

NCM p-value NCM frequency
(per structure per nucleotide)
Means
ratio
1 (AY()U) < 0.001 37.2
BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
...................................................................................................1
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
2 A(C(C)) < 0.001 22.8
BAAF04061048.1/5562-5661
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
CUCCAUUCCGGCUCCGUCCACCCAGUGUUCAGACUACCUGUUCAUUGUCAUACUGGUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCCGGGCUCUCCU
...................................................................................................1
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0
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3 A(GG(A)) < 0.001 24.7
4 U(CAG)R 0.0352 1.95
NCM p-value NCM frequency
(per structure per nucleotide)
Means
ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).