D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major
D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences
J. Mol. Biol., 435 (2023)

DUF805b RNA   (Rfam: RF02914)

Seed sequences
All NCMs (CSV file) (all) positive sequences (all) negative sequences (random) (training) positive sequences (training) negative sequences (testing) positive sequences (testing) negative sequences 

Options
Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN
Rfam
D-ORB
Augmented
((A)RA)R
(.NRNAG.)
((G)N)A
100.0
100.0
100.0
((A)RA)R
(.NRNAG.)
((G)N)A

% of positive sequence with ORB





Deep neural network:

5-fold cross-validation: 99.8 %
(± 0.176 %)

Testing accuracy: 100 %
Decision tree:

5-fold cross-validation: 98.2 %
(± 0.655 %)

Testing accuracy: 98.5 %
D-ORB structure
D-ORB structure decision tree:

5-fold cross-validation: 97 %
(± 0.499 %)

Testing accuracy: 97.2 %
of URS0000D6C890_12908/1-34
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.....((......)..)(((((......)))).)
.........1.........2.........3....
1234567890123456789012345678901234

abstract shape: ()()

Number of sequences
Structure ORBs (out of 1198) (%)
1 ((A)RA)R
 1135 94.7
>URS0000D659A5_12908/1-35
UUGGGAAUUGCCGAAAACCCAUAAAAGAGUAGGCG
.....(.(.....)..)..................
>URS0000D67E11_12908/1-36
AUCGGGUAAGCCGAAAACCGAAUCUAAGAGUAGGCA
.....((......)..)...................
>URS0000D6A575_12908/1-33
AAACCGGAUGCCGAAAAGGUUAUAGAGUAGGCG
.....((......)..)................
>URS0000D66641_12908/1-36
AACCCGUAAGCCGAAAAGGGUAUUAUAGAGUAGGCA
.....((......)..)...................
>URS0000D69F87_313606/1-37
AAAGCGAUUGCCGAAAAGCUGUAUAAAAGAGUAGGCA
....(..(......)..)...................
>URS0000D6905D_471854/1-35
GCAGGGGACGCUGAAAACCUGAAAAAGAGUAGGCU
.................((......)..)......
>URS0000D67347_12908/1-33
UACGAGUAAUCCGAAAAUCGAUAAGAGUAGGAA
..............(.(......)..)......
>URS0000D68CDD_12908/1-35
GAUGAGGAUGCCGAAAAUCAUAAAGAGAGUAGGCA
..............(...(......)..)......
>URS0000D6955E_12908/1-35
AAUGGAAUUUCCGAAAACCAUUAAAAGAGUAGGAA
..............(...(......)..)......
>URS0000D66543_12908/1-37
ACCGAGGAAAGCUGAAAAUCGGAUAAAAGAGUAGGCG
...............(....(......)..)......
>URS0000D67C9E_12908/1-36
GAGGGGGUAUCUGAAAACCCGUAAAAAGAGUAGGAA
......((.....)..)...................
>URS0000D6A645_12908/1-36
CGCGGGAAUGCCGAAAACCGUGGAAAAGAGUAGGCU
..............(....(......)..)......
>URS0000D68BC1_700598/1-36
AGUGGGAUUCGCCGAAAACCAUUAAAAGAGUAGGCA
...............(...(......)..)......
>URS0000D66447_12908/1-33
UUUGGGGAUGCCGAAAACCAAAUAGAGUAGGUG
.....((......)..)................
>URS0000D676E9_12908/1-35
AACCAGGAUACCGAAAAUGGUGAAAAGAGUAGGUA
..............(...(......)..)......
>URS0000D67656_12908/1-33
AAUGGGGAUUCCGAAAACCACAGAGAGUAGGAA
..............(.(......)..)......
>URS0000D6C45A_694427/1-36
ACCGCAGCAGCCGAAAAGCGGAACAAAGAGUAGGCA
.....((......)..)...................
>URS0000D6BF14_12908/1-35
ACAGGGAUUGCCGAAAACCUGGGAAAGAGUAGGCG
..............(...(......)..)......
>URS0000D664FA_313606/1-36
UCAGGGGACUCCGAAAACCUAGCAAUAGAGUAGGGA
.................(.(......)..)......
>URS0000D682EE_12908/1-37
AAGGUGGUUGUCCGAAAAACCUUGAAUAGAGUAGGGC
.....(.(......)..)...................
>URS0000D68550_743722/1-36
UAGGGCGUAACCGAAAACCCUUGAUCAGAGUAGGCA
.....((......)..)...................
>URS0000D6B61B_12908/1-38
GUGGAGAAAACCGAAAAUCCAAAAUAACAGAGUAGGUA
.....((......)..).....................
>URS0000D6BEF8_12908/1-33
AAUGAGGUUGCCGAAAAUCAUUAAGAGUAGGCA
.....((......)..)................
>URS0000D65EB1_12908/1-36
AAGGGGAUUGCCGAAAACCCUGCAAUAGAGUAGGCG
.....((......)..)...................
>URS0000D687F9_12908/1-35
UAAGGGGAUGCUGAAAACCUUGAAAAGAGUAAGCU
.....((......)..)..................
>URS0000D6D2F9_12908/1-33
AGGGGGGUAGCCGAAAACCCUGUAGAGUAGGCA
.....((......)..)................
>URS0000D6B355_12908/1-36
GAGGGGUAAUCUGAAAACCCGUAAACAGAGUAGGAA
.....((......)..)...................
>URS0000D68AAA_12908/1-36
ACGGCAGAUUCUGAAAAGCCGGUAACAGAGUAAGAG
.....((......)..)...................
>URS0000D69EF1_12908/1-33
AAAGUGGAAGCCGAAAAACUUUACGAGUAGGCA
.....((......)..)................
>URS0000D6570F_12908/1-33
UUAGCGUAUUCCGAAAAGCUAAAAGAGUAGGGA
.....((......)..)................
>URS0000D6C55D_12908/1-35
GAUGGGGUAUCCGAAAACCAUUGAAAGAGUAGGAA
.....((......)..)..................
>URS0000D6A685_12908/1-36
AUCGAGAAUGCCGAAAAUCGAUUAAAAGAGUAGGCU
..............(....(......)..)......
>URS0000D6D3EA_12908/1-35
CUGGUGUAACCCGAAAAACCACAAAAGAGUAGGGA
.....((......)..)..................
>URS0000D6AA57_12908/1-35
AAUGGAGUUUCCGAAAACCAUCAAAAGAGUAGGAA
..............(...(......)..)......
>URS0000D6967B_575590/1-37
UACGGGGAACCUGAAAACCGUAUUAAUAGAGUAGGGA
.....((......)..)....................
>URS0000D664C6_12908/1-35
UUGGUGGUACCCGAAAAACCAUAAAAGAGUAGGGG
.......((.....)..).................
>URS0000D69E97_694427/1-35
ACAGCGUAACCUGAAAAGCUGCAAAAGAGUAAGGA
.....((......)..)..................
>URS0000D68A4E_12908/1-35
AAAGGGGAAAUCGAAAACCUUGAAAAGAGUAGAAA
.....((......)..)..................
>URS0000D6CB64_12908/1-36
UGCGGGUAAGCCGAAAACCGUAUCAGAGAGUAGGCA
.....((......)..)...................
>URS0000D69372_12908/1-35
AAAGGGAAUGCCGAAAACCUUUAACAAAGUAGACA
.....((......)..)..................
>URS0000D66BDB_12908/1-33
AUACCGUUAGCCGAAAAGGUAAAAGAGUAGGCA
.....((......)..)................
>URS0000D6A9A1_12908/1-35
CGCGGGAAAGCCGAAAACCGUGAAAAGAGUAGGCU
..............(...(......)..)......
>URS0000D6C2B6_12908/1-36
AUCGAGAAUGCCGAAAAUCGAUUAAAAGAGUAGGCC
..............(....(......)..)......
>URS0000D66682_12908/1-34
AAGGUGGAUGCCGAAAAACCUGAAAGAGUAGGCA
.....((......)..).................
>URS0000D6C871_12908/1-36
UAUAGGGUAGCCGAAAACUAUUUAAAAGAGUAGGCA
..............(....(......)..)......
>URS0000D6C8C9_12908/1-38
AGGGAGGUAGCCCAAAAUCCCACACAACAGAGUAGGCA
.....((......)..).....................
>URS0000D6CACB_12908/1-32
AUCGAGGAUGCCGAAAAGCGAAAGAGUAGGCA
..............((......)..)......
>URS0000D6B096_12908/1-35
AUGCAGGAAGCUGAAAAUGCAAAACAGAGUAAGCA
.....((......)..)..................
>URS0000D6CAAC_12908/1-39
CAGGGGAAUGCCGAAAACCCUUUUGCAACAGAGUAGGCG
.....((......)..)......................
>URS0000D6A71A_12908/1-35
UGAGCGGAAGCCGAAAAGCUCUGAUUGAGUAGGCG
.....((......)..)..................
>URS0000D6CEAC_12908/1-36
ACGGAGUAUCCCCGAAAAUCCGGAAUAGAGUAGGGA
.....(..(.....)..)..................
>URS0000D663E4_12908/1-36
ACGCAGGAAGCCGAAAAUGCGGACAAAGAGUAGGCG
...............(.(......)..)........
>URS0000D6B923_12908/1-35
UGGGAGGAGUCCGAAAAUCCCAAACAGAGUAGGAA
.....((......)..)..................
>URS0000D677A1_12908/1-36
ACGGAGGUUCCGAAAAUCCGAGAAAUAGAGUAGGAA
..................((......)..)......
>URS0000D65E4B_12908/1-35
ACAGGCGGUGCUGAAAACCUGAAAUAGAGUAGGCA
..............(...(......)..)......
>URS0000D67E00_12908/1-37
UAUGGGUAACCCGAAAACCAUAUUAAUAGAGUAGGGG
.....((......)..)....................
>URS0000D69A04_12908/1-35
UGAGCGGAAGCCGAAAAGCUCUGAUCGAGUAGGCG
.....((......)..)..................
>URS0000D6622F_12908/1-35
AAAGAGGAUGUCGAAAAUCUUUAAAAGAGUAGACG
.....((......)..)..................
>URS0000D69C2C_12908/1-36
AGCGCGGCAGCCGAAAAGCGUUUAACAGAGUAGGCG
.....((......)..)...................
>URS0000D6B57B_12908/1-35
UUGGGAGAUUCCGAAAACCCUUAAGAGAGUAGGAU
..............(...(......)..)......
>URS0000D66999_12908/1-33
GUAGGGGAUUCCGAAAACCUAUUAGAGUAGGAA
.....((......)..)................
>URS0000D6ADAE_12908/1-35
CAGGUGGAUGCCGAAAAACCUUUAACGAGUAGGCG
.....((......)..)..................
>URS0000D6B1DA_12908/1-36
AACGCGUAUGCUGAAAAGCGUAUAACAGAGUAGGCU
.....((......)..)...................
>URS0000D66B45_12908/1-35
UAGGCAGUAUCCGAAAAGCCAGAACAGAGUAGGAC
....(..(......)..).................
>URS0000D65C41_12908/1-35
AUGACGGGUUUCGAAAAGUCAUAAUAGAGUAGGAA
....(..(......)..).................
>URS0000D6789F_12908/1-36
ACGGAGGUUCCGAAAAUCCAAUAAACAGAGUAGGAA
.............(.....(......)..)......
>URS0000D6BDBA_525257/1-36
AUGGCGGCAUCUGAAAAGCCAUUAAAAGAGUAAGAA
.....((......)..)...................
>URS0000D67759_12908/1-35
AUGGAGUAUGUCGAAAAUCCAUAAGAGAGUAGGCA
.....((......)..)..................
>URS0000D665F6_12908/1-35
AUAGAGGUAGCUGAAAAUCUAUAAAAGAGUAAGCA
.....((......)..)..................
>URS0000D69328_12908/1-35
AAGGUAGAUGCCGAAAAACCUUUAAAGAGUAGGUA
.....((......)..)..................
>URS0000D6722D_700598/1-37
GGCGGGGAAGCCGAAAACCGUUAAAAUAGAGUAGGCC
.................(..(......)..)......
>URS0000D6CC90_1149865/1-35
AAAGGAGUAGCCGAAAACCUCAAACAGAGUAGGCA
..............(...(......)..)......
>URS0000D6B955_391596/1-35
GAAGGGUAAGCUGAAAACCUUUAACAGAGUAGGCG
.....((......)..)..................
>URS0000D69D8D_12908/1-34
ACGGAGGUUCCGAAAAUCCAAGAAAGAGUAGGAA
.............(...(......)..)......
>URS0000D6897E_12908/1-35
CUGGAAUAUGCUGAAAAUCCUAAAAAGAGUAGGCA
..............(...(......)..)......
>URS0000D67F52_700598/1-35
UUAGGGGAUACCGAAAACCUAAAACAGAGUAGGUA
.....((......)..)..................
>URS0000D65B42_12908/1-35
AUGACGGGUUCCGAAAAGUCAUAAUAGAGUAGGAA
....(..(......)..).................
>URS0000D666D4_1189621/1-34
CUGGAGUAUCCCGAAAAUCCAUAAAGAGUAGGGA
..............(..(......)..)......
>URS0000D668F1_12908/1-36
AACGGGGGUGCCGAAAACCGUGUGAAAGAGUAGGCG
..............(....(......)..)......
>URS0000D674B4_12908/1-37
GCAGGGGAAGCUGAAAACCUGUAGAACCGAGUAGGCA
.....((......)..)....................
>URS0000D68B64_12908/1-35
AAAGGAAAUGCCGAAAACCUUCAAAAGAGUAGGCA
..............(...(......)..)......
>URS0000D66892_12908/1-36
ACAGAGGAACCUGAAAAUCUGCAAACAGAGUAAGGA
..............(....(......)..)......
>URS0000D66D95_1144313/1-36
ACAGUGAAAACCGAAAAACUGAAAAAAGAGUAGGUA
..................((......)..)......
>URS0000D66C31_926559/1-35
GAAGUGAAAACCGAAAAACUUAAAUAGAGUAGGUA
.....((......)..)..................
>URS0000D6B5BF_12908/1-35
AUGGAGAAUGCCGAAAAGCCAUAAAUGAGUAGGCA
.....(.(.....)..)..................
>URS0000D68F2C_12908/1-37
ACAGGAUUAGCCGAAAACCUGUAUAAGAGAGUAGGCG
.....((......)..)....................
>URS0000D65E65_12908/1-35
UCAGGGGCCGCCGAAAACCUGGAACAGAGUAGGCA
.....((......)..)..................
>URS0000D6943E_12908/1-35
UAAGGAGUCGCCGAAAACCUAUAAAAGAGUAGGCA
..............(...(......)..)......
>URS0000D69E59_12908/1-37
GCAGGACAAUCCGAAAACCUGUAGAAAAGAGUAGGAA
..............(.....(......)..)......
>URS0000D6B5D0_12908/1-35
AAUGGAAUUUCCGAAAACCAUCAAAAGAGUAGGAA
..............(...(......)..)......
>URS0000D681C2_12908/1-35
ACAGCGAAUUCCGAAAAGCUGUGAGAGAGUAGGAG
.....((......)..)..................
>URS0000D666B1_12908/1-35
AAAGAGGCACCUGAAAAUCUUAAAAAGAGUAAGGA
..............(...(......)..)......
>URS0000D68330_12908/1-36
AUCGCAUAUGCCGAAAAGCGUAUAAUAGAGUAGGCU
..................(.(.....)..)......
>URS0000D6743F_313596/1-35
CGGGAGGAUUCCGAAAAUCCGGAAAAGAGUAGGAG
...............((......)..)........
>URS0000D698E0_12908/1-35
GAGGCGGCAACCGAAAAGCCAUAAGAGAGUAGGUA
.....((......)..)..................
>URS0000D68434_700598/1-35
ACAGGGUUGGCCGAAAACCUGAAACAGAGUAGGCA
.....((......)..)..................
>URS0000D65B37_391587/1-35
AAAGGGUAAACUGAAAACCUUUAACAGAGUAAGUA
.....((......)..)..................
>URS0000D6A60D_12908/1-35
ACGGAGGAAGCCGAAAAUCCGUACUAGAGUAGGCG
.....((......)..)..................
>URS0000D6CC55_12908/1-36
ACGGAGGUUCCGAAAAUCCAAAAAACAGAGUAGGAA
.................(.(......)..)......
>URS0000D682B9_12908/1-35
UAGGCGGUGCCCGAAAGGCCUUAAAAGAGUAGGGA
....(.(......)..)..................
2 ((A)RA)R
(.NRNAG.)
 1058 88.3
>URS0000D6D2F9_12908/1-33
AGGGGGGUAGCCGAAAACCCUGUAGAGUAGGCA
.....((......)..).....(.......)..
>URS0000D6A575_12908/1-33
AAACCGGAUGCCGAAAAGGUUAUAGAGUAGGCG
.....((......)..).....(.......)..
>URS0000D66447_12908/1-33
UUUGGGGAUGCCGAAAACCAAAUAGAGUAGGUG
.....((......)..).....(.......)..
>URS0000D687F9_12908/1-35
UAAGGGGAUGCUGAAAACCUUGAAAAGAGUAAGCU
.....((......)..).....(......).....
>URS0000D6D3EA_12908/1-35
CUGGUGUAACCCGAAAAACCACAAAAGAGUAGGGA
.....((......)..).....(......).....
>URS0000D6CAAC_12908/1-39
CAGGGGAAUGCCGAAAACCCUUUUGCAACAGAGUAGGCG
.....((......)..)......(.......).......
>URS0000D68550_743722/1-36
UAGGGCGUAACCGAAAACCCUUGAUCAGAGUAGGCA
.....((......)..).....(.......).....
>URS0000D69E97_694427/1-35
ACAGCGUAACCUGAAAAGCUGCAAAAGAGUAAGGA
.....((......)..).....(......).....
>URS0000D69C2C_12908/1-36
AGCGCGGCAGCCGAAAAGCGUUUAACAGAGUAGGCG
.....((......)..).....(.....).......
>URS0000D65C41_12908/1-35
AUGACGGGUUUCGAAAAGUCAUAAUAGAGUAGGAA
....(..(......)..).....(.....).....
>URS0000D65EB1_12908/1-36
AAGGGGAUUGCCGAAAACCCUGCAAUAGAGUAGGCG
.....((......)..).....(......)......
>URS0000D66641_12908/1-36
AACCCGUAAGCCGAAAAGGGUAUUAUAGAGUAGGCA
.....((......)..).....(.....).......
>URS0000D6C8C9_12908/1-38
AGGGAGGUAGCCCAAAAUCCCACACAACAGAGUAGGCA
.....((......)..).....(........)......
>URS0000D66682_12908/1-34
AAGGUGGAUGCCGAAAAACCUGAAAGAGUAGGCA
.....((......)..).....(.....).....
>URS0000D66B45_12908/1-35
UAGGCAGUAUCCGAAAAGCCAGAACAGAGUAGGAC
....(..(......)..).....(.....).....
>URS0000D6CEAC_12908/1-36
ACGGAGUAUCCCCGAAAAUCCGGAAUAGAGUAGGGA
.....(..(.....)..).....(......).....
>URS0000D6967B_575590/1-37
UACGGGGAACCUGAAAACCGUAUUAAUAGAGUAGGGA
.....((......)..).....(......).......
>URS0000D6CB64_12908/1-36
UGCGGGUAAGCCGAAAACCGUAUCAGAGAGUAGGCA
.....((......)..).....(.....).......
>URS0000D6B355_12908/1-36
GAGGGGUAAUCUGAAAACCCGUAAACAGAGUAGGAA
.....((......)..).....(.....).......
>URS0000D6570F_12908/1-33
UUAGCGUAUUCCGAAAAGCUAAAAGAGUAGGGA
.....((......)..).....(.......)..
>URS0000D6622F_12908/1-35
AAAGAGGAUGUCGAAAAUCUUUAAAAGAGUAGACG
.....((......)..).....(......).....
>URS0000D66999_12908/1-33
GUAGGGGAUUCCGAAAACCUAUUAGAGUAGGAA
.....((......)..).....(........).
>URS0000D664C6_12908/1-35
UUGGUGGUACCCGAAAAACCAUAAAAGAGUAGGGG
.......((.....)..).....(.....).....
>URS0000D6ADAE_12908/1-35
CAGGUGGAUGCCGAAAAACCUUUAACGAGUAGGCG
.....((......)..).....(.........)..
>URS0000D6BDBA_525257/1-36
AUGGCGGCAUCUGAAAAGCCAUUAAAAGAGUAAGAA
.....((......)..).....(.....).......
>URS0000D6B1DA_12908/1-36
AACGCGUAUGCUGAAAAGCGUAUAACAGAGUAGGCU
.....((......)..).....(......)......
>URS0000D69328_12908/1-35
AAGGUAGAUGCCGAAAAACCUUUAAAGAGUAGGUA
.....((......)..).....(......).....
>URS0000D665F6_12908/1-35
AUAGAGGUAGCUGAAAAUCUAUAAAAGAGUAAGCA
.....((......)..).....(......).....
>URS0000D698E0_12908/1-35
GAGGCGGCAACCGAAAAGCCAUAAGAGAGUAGGUA
.....((......)..).....(......).....
>URS0000D67E7C_12908/1-35
AUGGUGGAAGCCGAAAAACCAGAAGAGAGUAGGCG
.....((......)..).....(......).....
>URS0000D6B61B_12908/1-38
GUGGAGAAAACCGAAAAUCCAAAAUAACAGAGUAGGUA
.....((......)..).....(.......).......
>URS0000D682B9_12908/1-35
UAGGCGGUGCCCGAAAGGCCUUAAAAGAGUAGGGA
....(.(......)..).....(......).....
>URS0000D6BA48_946077/1-34
UAGGUGGAAGCUGAAAAACCUUAAAGAGUAGGCA
.....((......)..).....(.....).....
>URS0000D6C9D2_620914/1-36
AGGGGGGAAGCCGAAAAACCUUUAAUAGAGUAAGCA
.....((......)..).....(.....).......
>URS0000D67F52_700598/1-35
UUAGGGGAUACCGAAAACCUAAAACAGAGUAGGUA
.....((......)..).....(......).....
>URS0000D66C31_926559/1-35
GAAGUGAAAACCGAAAAACUUAAAUAGAGUAGGUA
.....((......)..).....(......).....
>URS0000D66BDB_12908/1-33
AUACCGUUAGCCGAAAAGGUAAAAGAGUAGGCA
.....((......)..).....(.......)..
>URS0000D659A5_12908/1-35
UUGGGAAUUGCCGAAAACCCAUAAAAGAGUAGGCG
.....(.(.....)..).....(......).....
>URS0000D67C9E_12908/1-36
GAGGGGGUAUCUGAAAACCCGUAAAAAGAGUAGGAA
......((.....)..).....(.......).....
>URS0000D65B42_12908/1-35
AUGACGGGUUCCGAAAAGUCAUAAUAGAGUAGGAA
....(..(......)..).....(.....).....
>URS0000D6C55D_12908/1-35
GAUGGGGUAUCCGAAAACCAUUGAAAGAGUAGGAA
.....((......)..).....(.......)....
>URS0000D69EF1_12908/1-33
AAAGUGGAAGCCGAAAAACUUUACGAGUAGGCA
.....((......)..)......(......)..
>URS0000D65E65_12908/1-35
UCAGGGGCCGCCGAAAACCUGGAACAGAGUAGGCA
.....((......)..).....(......).....
>URS0000D67759_12908/1-35
AUGGAGUAUGUCGAAAAUCCAUAAGAGAGUAGGCA
.....((......)..).....(......).....
>URS0000D6B955_391596/1-35
GAAGGGUAAGCUGAAAACCUUUAACAGAGUAGGCG
.....((......)..).....(......).....
>URS0000D6B096_12908/1-35
AUGCAGGAAGCUGAAAAUGCAAAACAGAGUAAGCA
.....((......)..).....(......).....
>URS0000D6919A_485917/1-35
AUGGCGAACGCUGAAAAGCCUUAACAGAGUAAGCA
.....(.(.....)..).....(......).....
>URS0000D6B636_12908/1-36
UUGGCGAAACCCGAAAAGCCAAAAAUAGAGUAGGGU
.....((......)..).....(.....).......
>URS0000D681C2_12908/1-35
ACAGCGAAUUCCGAAAAGCUGUGAGAGAGUAGGAG
.....((......)..).....(.......)....
>URS0000D68AAA_12908/1-36
ACGGCAGAUUCUGAAAAGCCGGUAACAGAGUAAGAG
.....((......)..).....(.....).......
>URS0000D6C45A_694427/1-36
ACCGCAGCAGCCGAAAAGCGGAACAAAGAGUAGGCA
.....((......)..).....(.....).......
>URS0000D65B37_391587/1-35
AAAGGGUAAACUGAAAACCUUUAACAGAGUAAGUA
.....((......)..).....(......).....
>URS0000D6AABF_485917/1-40
CAGGUGGAAGCCGAAAAACCUGAUUAAAACAGAGUAGGCA
.....((......)..)......(........).......
>URS0000D66A76_391587/1-36
AAGGUGUAAGCUGAAAAACCUAAAAUAGAGUAAGUA
.....((......)..).....(.....).......
>URS0000D68976_485917/1-40
CAGGUGGAAGCCGAAAAACCUGAUUGAAACAGAGUAGGCA
.....((......)..)......(........).......
>URS0000D6BEF8_12908/1-33
AAUGAGGUUGCCGAAAAUCAUUAAGAGUAGGCA
.....((......)..).....(.......)..
>URS0000D66166_12908/1-35
UCAGGGGAAGCUGAAAACCUGUAACAGAGUAAGCA
.....((......)..).....(......).....
>URS0000D658ED_12908/1-35
UCGGGGGAUGCCGAAAACCCGCAACAGAGUAGGCA
.....((......)..).....(......).....
>URS0000D6A768_12908/1-36
UACGGGGAACCUGAAAACCGCAUAAUAGAGUAGGGA
.....((......)..).....(.....).......
>URS0000D68F2C_12908/1-37
ACAGGAUUAGCCGAAAACCUGUAUAAGAGAGUAGGCG
.....((......)..).....(......).......
>URS0000D6B5CF_12908/1-36
AUGGAGUAAGCUGAAAAUCCUUAUAAAGAGUAGGCG
.....((......)..).....(.....).......
>URS0000D6A129_12908/1-33
AAGGGAGAAACCGAAAACCCAUUAGAGUAGGUA
.....((......)..)....(......)....
>URS0000D69F87_313606/1-37
AAAGCGAUUGCCGAAAAGCUGUAUAAAAGAGUAGGCA
....(..(......)..).....(.....).......
>URS0000D68434_700598/1-35
ACAGGGUUGGCCGAAAACCUGAAACAGAGUAGGCA
.....((......)..).....(......).....
>URS0000D6D2BE_12908/1-36
ACCUCGUAAGCCGAAAAGAGGAAAAUAGAGUAGGCA
.....((......)..).....(.....).......
>URS0000D6785E_12908/1-36
AGGGAGCAAGCCGAAAAUCCCGUAACAGAGUAGGCG
.....((......)..).....(.....).......
>URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.....((......)..).....(.....).....
>URS0000D6611F_12908/1-35
UAGGAGUAUGCUGAAAAUCCUAAAAAGAGUAGGUG
.....((......)..).....(......).....
>URS0000D6C5CD_12908/1-36
ACCCCGUAAGCCGAAAAGGGGAACAAAGAGUAGGCA
.....((......)..).....(.....).......
>URS0000D66253_12908/1-35
AUGGAGGAAGCCGAAAAUCCUUUGAAGAGUAGGCG
.....((......)..).....(......).....
>URS0000D68644_12908/1-36
UAGGCAGUAUCCGAAAAGCCUUCAAUAGAGUAGGAG
....(..(......)..).....(......).....
>URS0000D6B026_12908/1-37
UAGGUGGAUUCCGAAAAACCUGUAAAUAGAGUAGGAU
.....((......)..).....(.......)......
>URS0000D6B3C6_12908/1-37
AAGGGGUAAUACCGAAAACCCUGAAAUAGAGUAGGUA
......((......)..).....(......)......
>URS0000D6A8B7_313606/1-36
CAGGCGAACACCGAAAAGCCUAAAACAGAGUAGGUG
.....((......)..).....(.....).......
>URS0000D6B1D5_504472/1-35
AGGGUGCAAGCCGAAAAACCCUAAAAGAGUAGGCG
.....((......)..).....(......).....
>URS0000D67009_12908/1-35
CUGGAGGAAGCCGAAAAUCCUGAAAAGAGUAGGUU
.....((......)..).....(......).....
>URS0000D67CC0_391587/1-36
CAGGCGUAAUUCUGAAAAGCCUCAAUAGAGUAGGAG
....(...(......)..).....(.....).....
>URS0000D6B6D5_12908/1-38
AAGGGGUAAUACCGAAAACCCUAGAAAUAGAGUAGGUA
......((......)..).....(......).......
>URS0000D66252_12908/1-40
UGGGUGCAAGCCGAAAAACCCGACAAAAAAAGAGUAGGCA
.....((......)..)......(.........)......
>URS0000D6AA3A_12908/1-35
AGGGAGGUAUCCGAAAAUCCUUAACAGAGUAGGAU
.....((......)..).....(......).....
>URS0000D656F2_12908/1-37
ACAGGGGUAACCGAAAACCUGUAUAAAAGAGUAGGCC
.....((......)..).....(......).......
>URS0000D66B2B_12908/1-39
AGGGCGUAUCCCGAAAAGCCCUUAUAAAACGAGUAGGGA
.....((......)..)......(............)..
>URS0000D6BE1C_12908/1-35
UAGGCGGAUGCCGAAAAGCCUUAAAUGAGUAGGUU
.....((......)..)......(........)..
>URS0000D69A65_12908/1-38
AUGGUGGAUUCUGAAAAACCUAUAAAACAGAGUAGGAA
.....((......)..).....(........)......
>URS0000D6BC65_12908/1-36
AGGGAGUAAGCCGAAAAUCCCAAUCAAGAGUAGGCA
.....((......)..).....(.......).....
>URS0000D65ACB_12908/1-38
CAGGACGCCGCCGAAAAUCCUAUUUAAUAGAGUAGGCA
.....((......)..).....(........)......
>URS0000D67E9C_12908/1-41
UCGGCGCAAACCGAAAAGCCGUAUACCAAACAGAGUAGGUA
.....((......)..).....(...........)......
>URS0000D67E00_12908/1-37
UAUGGGUAACCCGAAAACCAUAUUAAUAGAGUAGGGG
.....((......)..).....(......).......
>URS0000D66CAC_12908/1-35
AGAGAGGAAGCCGAAAAUCUCAUAAAGAGUAGGCA
.....((......)..)......(.....).....
>URS0000D6A45E_12908/1-33
GAGGCGUACUCCGAAAAGCCUUAAGAGUAGGAA
.....((......)..).....(.......)..
>URS0000D67854_12908/1-36
UAGGCGAAUUCCGAAAAGCCAAUGAGAGAGUAGGAG
.....((......)..).....(.....).......
>URS0000D67AE7_12908/1-37
ACAGGGUGUUCCGAAAACCUGUAGAAAAGAGUAGGAG
.....((......)..).....(........).....
>URS0000D66ED4_12908/1-38
UAAGCGGUUGCCGAAAAGCUAAUAGUAAAGAGUAGGCA
....(..(......)..).....(......).......
>URS0000D6AFB3_156586/1-33
UAAGCGACAGCCGAAAAGCUUAUAGAGUAGGCA
.....((......)..)....(.....).....
>URS0000D6C855_12908/1-34
GUAGCGGUAUCCGAAAAGCUAUAAAGAGUAGGAA
....(..(......)..).....(.......)..
>URS0000D6BCBD_12908/1-34
ACGGCGGAACCGAAAAGCCGAAGAUGAGUAGGAA
....(.(......)..)......(.......)..
>URS0000D6B057_12908/1-35
GAGGCGUAACCGAAAAGCCUAAGAUAGAGUAGGAA
....(.(......)..).....(......).....
>URS0000D66B4C_12908/1-33
GGAGCGAAAGCCGAAAAGCUUAUAGAGUAGGUA
.....(.(.....)..)....(.....).....
>URS0000D6927B_12908/1-35
AUGGAGUAUUCCGAAAAUCCAGAACAGAGUAGGAA
.....((......)..).....(......).....
>URS0000D6AA95_12908/1-39
AAGGAGGUUACUGAAAAUCCUUGAAUAAUAGAGUAGGAA
.....((......)..)......(.......).......
3 ((A)RA)R
(.NRNAG.)
((G)N)A
 749 62.5
>URS0000D6919A_485917/1-35
AUGGCGAACGCUGAAAAGCCUUAACAGAGUAAGCA
.....(.(.....)..)(.(..(......)..).)
>URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.....((......)..)(.(..(.....)..).)
>URS0000D6B5CF_12908/1-36
AUGGAGUAAGCUGAAAAUCCUUAUAAAGAGUAGGCG
.....((......)..)(.(..(.....)).)....
>URS0000D6BDBA_525257/1-36
AUGGCGGCAUCUGAAAAGCCAUUAAAAGAGUAAGAA
.....((......)..)(.(..(.....)....).)
>URS0000D69A65_12908/1-38
AUGGUGGAUUCUGAAAAACCUAUAAAACAGAGUAGGAA
.....((......)..)((...(........)...).)
>URS0000D6785E_12908/1-36
AGGGAGCAAGCCGAAAAUCCCGUAACAGAGUAGGCG
.....((......)..)(.(..(.....)).)....
>URS0000D6927B_12908/1-35
AUGGAGUAUUCCGAAAAUCCAGAACAGAGUAGGAA
.....((......)..)(.(..(......)..).)
>URS0000D66252_12908/1-40
UGGGUGCAAGCCGAAAAACCCGACAAAAAAAGAGUAGGCA
.....((......)..)(.(...(.........)...).)
>URS0000D6B057_12908/1-35
GAGGCGUAACCGAAAAGCCUAAGAUAGAGUAGGAA
....(.(......)..)((...(......).).).
>URS0000D6B026_12908/1-37
UAGGUGGAUUCCGAAAAACCUGUAAAUAGAGUAGGAU
.....((......)..)((...(.......)..).).
>URS0000D67F52_700598/1-35
UUAGGGGAUACCGAAAACCUAAAACAGAGUAGGUA
.....((......)..)((...(......)..).)
>URS0000D6C9D2_620914/1-36
AGGGGGGAAGCCGAAAAACCUUUAAUAGAGUAAGCA
.....((......)..)(.(..(.....)....).)
>URS0000D68644_12908/1-36
UAGGCAGUAUCCGAAAAGCCUUCAAUAGAGUAGGAG
....(..(......)..)..((.(......).).).
>URS0000D65B37_391587/1-35
AAAGGGUAAACUGAAAACCUUUAACAGAGUAAGUA
.....((......)..)(.(..(......)..).)
>URS0000D6AABF_485917/1-40
CAGGUGGAAGCCGAAAAACCUGAUUAAAACAGAGUAGGCA
.....((......)..)(.(...(........)....).)
>URS0000D6A58D_12908/1-35
AGGGCGGAACCCGAAAAGCCCGAACAGAGUAAGGA
.....((......)..)(.(..(......)..).)
>URS0000D6BC65_12908/1-36
AGGGAGUAAGCCGAAAAUCCCAAUCAAGAGUAGGCA
.....((......)..)(.(..(.......)..).)
>URS0000D65ACB_12908/1-38
CAGGACGCCGCCGAAAAUCCUAUUUAAUAGAGUAGGCA
.....((......)..)(.(..(........)...).)
>URS0000D69E0F_12908/1-38
UAGGGGCAAGCUGAAAACCCUAGAGAAAAGAGUAGGCA
.....((......)..)((...(.......)....).)
>URS0000D68789_12908/1-36
AGGGACGAAGCCGAAAAUCCCUUAUCAGAGUAGGCA
.....((......)..)(.(..(.......)..).)
>URS0000D69F87_313606/1-37
AAAGCGAUUGCCGAAAAGCUGUAUAAAAGAGUAGGCA
....(..(......)..).(.(.(.....)....).)
>URS0000D665F6_12908/1-35
AUAGAGGUAGCUGAAAAUCUAUAAAAGAGUAAGCA
.....((......)..)((...(......)..).)
>URS0000D6694D_12908/1-35
AGGGCGGAUGCCGAAAAGCCCGAAAAGAGUAGGCA
.....((......)..)(.(..(......)..).)
>URS0000D67854_12908/1-36
UAGGCGAAUUCCGAAAAGCCAAUGAGAGAGUAGGAG
.....((......)..)(.(..(.....)...).).
>URS0000D698E2_12908/1-36
GGGGACGAAGCCGAAAAUCCCUUAUCAGAGUAGGCA
.....((......)..)(.(..(.......)..).)
>URS0000D6BDAF_531844/1-35
AAGGGGGAAGCCGAAAACCCGUGUCAGAGUAGGCA
.....((......)..).((...(......).).)
>URS0000D6CEAC_12908/1-36
ACGGAGUAUCCCCGAAAAUCCGGAAUAGAGUAGGGA
.....(..(.....)..)(.(..(......)..).)
>URS0000D672E7_12908/1-38
CAGGCAGAUUCCGAAAAGCCUUUGAUAUAGAGUAGGAG
....(..(......)..)..((.(......)...).).
>URS0000D6BB72_12908/1-35
GAAGAGGUGCCCGAAAAUCUUUGAAAGAGUAGGGA
.....((......)..)(.(..(......)..).)
>URS0000D6C55D_12908/1-35
GAUGGGGUAUCCGAAAACCAUUGAAAGAGUAGGAA
.....((......)..)((...(.......).).)
>URS0000D6B987_12908/1-33
AAUGGGGAAGCCGAAAACCAUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D69C42_12908/1-33
AAUAGGGAAGCUGAAAACUAUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D66CBA_12908/1-33
AAUGGGGAUGCCGAAAACCGUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D6741D_485918/1-37
AAUGGGGAAGCCGAAAACCAUUAGAAGAGAGUAGGCG
.....((......)..)..((.(......)).)....
>URS0000D6605D_12908/1-35
AAAGGGAAAGCUGAAAACCUUGAACAGAGUAGGCA
.....((......)..)((...(......)..).)
>URS0000D67CC0_391587/1-36
CAGGCGUAAUUCUGAAAAGCCUCAAUAGAGUAGGAG
....(...(......)..)..((.(.....).).).
>URS0000D6CB64_12908/1-36
UGCGGGUAAGCCGAAAACCGUAUCAGAGAGUAGGCA
.....((......)..)((...(.....)....).)
>URS0000D6AA58_867902/1-33
GAAGGGGAAACCGAAAACCUUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D6B61B_12908/1-38
GUGGAGAAAACCGAAAAUCCAAAAUAACAGAGUAGGUA
.....((......)..)(.(..(.......)....).)
>URS0000D6C669_12908/1-33
ACUGGGGAAGCUGAAAACCAUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D6A221_12908/1-35
ACAGGCGCAGCCGAAAACCUGGAAUAGAGUAGGCA
.....((......)..)((...(......)..).)
>URS0000D6890B_12908/1-33
ACUGGGUAAGCCGAAAACCAUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D684E6_12908/1-33
AUAGGGGAUGCCGAAAACCUUAUAGAGUAGGCA
......((.....)..)((..(.....)..).)
>URS0000D6B4C1_755732/1-35
AAUGGGGAAUCCGAAAACCAUAUUUAGAGUAGGAA
.....((......)..)((...(.......).).)
>URS0000D687A0_12908/1-33
AUUGGGGAAGCUGAAAACCAUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D67792_12908/1-33
AUUGGGGAAGCCGAAAACCAUUUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D68675_12908/1-33
AUUGGGGAAUCCGAAAACCAUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D68550_743722/1-36
UAGGGCGUAACCGAAAACCCUUGAUCAGAGUAGGCA
.....((......)..)(.(..(.......)..).)
>URS0000D6C3AF_12908/1-33
AUAGGGGAAGCCGAAAACCUGAUAGAGUAGGUA
......((.....)..)((..(.....)..).)
>URS0000D65B42_12908/1-35
AUGACGGGUUCCGAAAAGUCAUAAUAGAGUAGGAA
....(..(......)..)(.(..(.....)..).)
>URS0000D698E0_12908/1-35
GAGGCGGCAACCGAAAAGCCAUAAGAGAGUAGGUA
.....((......)..)(.(..(......)..).)
>URS0000D6619D_12908/1-33
AUUGGGGAAGCCGAAAACCAUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D6B967_12908/1-33
AUAGGGGAAGCUGAAAACCUGAUAGAGUAAGCA
.....((......)..)((..(.....)..).)
>URS0000D6C0A4_12908/1-34
AUAGGGGAUGCCGAAAACCUUAUUAGAGUAGGCA
......((.....)..)((...(.....)..).)
>URS0000D66166_12908/1-35
UCAGGGGAAGCUGAAAACCUGUAACAGAGUAAGCA
.....((......)..)(.(..(......)..).)
>URS0000D6655A_12908/1-33
UAAGGACAAGCCGAAAACCUUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D6D081_12908/1-34
AUGGAGGAACCGAAAAUCCCAAAUAGAGUAGGAA
..(.(.......)..)(.(..(......)..).)
>URS0000D682B9_12908/1-35
UAGGCGGUGCCCGAAAGGCCUUAAAAGAGUAGGGA
....(.(......)..)(.(..(......)..).)
>URS0000D6C8C9_12908/1-38
AGGGAGGUAGCCCAAAAUCCCACACAACAGAGUAGGCA
.....((......)..)(.(..(........)...).)
>URS0000D69068_12908/1-33
AGAAGGGAAGCCGAAAACUUUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D66682_12908/1-34
AAGGUGGAUGCCGAAAAACCUGAAAGAGUAGGCA
.....((......)..)(.(..(.....)..).)
>URS0000D6CAAC_12908/1-39
CAGGGGAAUGCCGAAAACCCUUUUGCAACAGAGUAGGCG
.....((......)..).(.(..(.......)).)....
>URS0000D6D3EA_12908/1-35
CUGGUGUAACCCGAAAAACCACAAAAGAGUAGGGA
.....((......)..)((...(......)..).)
>URS0000D6AA95_12908/1-39
AAGGAGGUUACUGAAAAUCCUUGAAUAAUAGAGUAGGAA
.....((......)..)(.(...(.......)).)....
>URS0000D66623_12908/1-33
AAAAGGGAAGCCGAAAACUUUAUAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D69891_269798/1-35
AAGGCGGAAACCGAAAAGCCCUGAAAGAGUAGGUA
.....((......)..)(.(..(......)..).)
>URS0000D69E1E_12908/1-33
AUAGGGGAAACUGAAAACCUUUUAGAGUAGGAA
.....((......)..)((..(.....)..).)
>URS0000D6C3A1_12908/1-35
AAGGCAGAACCCGAAAAGCCGAAACAGAGUAGGGA
.....((......)..)((...(......)..).)
>URS0000D6C731_12908/1-35
AGAGGGGAAGCCGAAAACCUUUAACAGAGUAGGCA
.....((......)..)((...(......)..).)
>URS0000D6AB1A_12908/1-33
ACCGGGGACGCUGAAAACCGAAAAGAGUAGGCA
.....((......)..)((..(.....)..).)
>URS0000D6AFF9_12908/1-35
AAAGGGUAAGCCGAAAACCUUAAAAAGAGUAGGCA
.....((......)..)((...(......)..).)
>URS0000D671E1_12908/1-36
ACGGAGUGUGCCGAAAAUCCGAUCAUAGAGUAGGCA
.....((......)..)((...(......)...).)
>URS0000D6CF6A_12908/1-35
AAAGGGUAAGCUGAAAACCUAAAAAAGAGUAAGCA
.....((......)..)((..(.....)....).)
>URS0000D69FED_12908/1-36
CAGGCAGAACCCGAAAAGCCUUGAACAGAGUAGGGA
.....((......)..)((...(.......)..).)
>URS0000D67759_12908/1-35
AUGGAGUAUGUCGAAAAUCCAUAAGAGAGUAGGCA
.....((......)..)(.(..(......)..).)
>URS0000D66628_12908/1-35
GUGGAGGAAGUCGAAAAUCCAUAAAAGAGUAGGCA
.....((......)..)(.(..(......)..).)
>URS0000D669E9_12908/1-35
CAGGAGUAGUCCGAAAAUCCUUAAAAGAGUAGGGA
.....((......)..)(.(..(......)..).)
>URS0000D66B45_12908/1-35
UAGGCAGUAUCCGAAAAGCCAGAACAGAGUAGGAC
....(..(......)..)..((.(.....).).).
>URS0000D66A76_391587/1-36
AAGGUGUAAGCUGAAAAACCUAAAAUAGAGUAAGUA
.....((......)..)((...(.....)).)....
>URS0000D6CD6B_12908/1-35
AUGGAGAAGGCCGAAAAUCCAACAAAGAGUAGGCA
.....((......)..)((..(.....)....).)
>URS0000D6BA48_946077/1-34
UAGGUGGAAGCUGAAAAACCUUAAAGAGUAGGCA
.....((......)..)(.(..(.....)..).)
>URS0000D67650_12908/1-35
UAGGAGAUUUCUGAAAAUCCUUUAAAGAGUAGGGA
.....(.(.....)..)(.(..(......)..).)
>URS0000D69717_12908/1-36
UUGGAGUAUGCCGAAAAUCCGAACAAAGAGUAGGCA
.....((......)..)(.(..(.....)....).)
>URS0000D699D0_525257/1-35
AAGGCAGCACCCGAAAAGCCGGAACAGAGUAGGGA
.....((......)..)(.(..(......)..).)
>URS0000D668A0_485917/1-35
AAUGAGGAAGCCGAAAAUCAAUAACAGAGUAGGCA
.....((......)..)(.(..(......)..).)
>URS0000D661C0_12908/1-36
AAGGCCGAACCCGAAAAGCCUUGAACAAAGUAGGGA
....(..(......)..)..((.(......)..).)
>URS0000D6A638_525257/1-34
AUGGGGAAAGCCGAAAACCCGAUCAGAGUAGGCA
.....((......)..)((...(.....)..).)
>URS0000D65C39_12908/1-35
AUGGCAGUAUCCGAAAAGCCCAAACAGAGUAGGAA
....(..(......)..)(.(..(.....)..).)
>URS0000D66D5E_12908/1-35
UGGGAGUACGCCGAAAAUCCUAUAAAGAGUAGGCA
.....((......)..)(.(..(......)..).)
>URS0000D69E97_694427/1-35
ACAGCGUAACCUGAAAAGCUGCAAAAGAGUAAGGA
.....((......)..)((...(......)..).)
>URS0000D6B1C0_12908/1-35
AAGGAGUUUGCCGAAAAUCCUUAAAAGAGUAAGCA
.....((......)..)(.(..(......)..).)
>URS0000D6A9C3_12908/1-36
AUGGAGUUAUGCCGAAAAUCCAACAAAGAGUAGGCA
.....((.......)..)((...(........)).)
>URS0000D670AE_12908/1-38
AUGGAGGAAGCCGAAAAUCCAAUCUAACAGAGUAGGCA
.....((......)..)(.(..(........)...).)
>URS0000D661A6_12908/1-36
AAGGCCGAAUCCGAAAAGCCGGGAAGAGAGUAGGAA
.....((......)..)((...(.....)....).)
>URS0000D6B923_12908/1-35
UGGGAGGAGUCCGAAAAUCCCAAACAGAGUAGGAA
.....((......)..)(.(..(......)..).)
>URS0000D6B47C_12908/1-35
AAGGAGGCAUCCGAAAAUCCUGAAGAGAGUAGGAA
.....((......)..)(.(..(......)..).)
>URS0000D681C2_12908/1-35
ACAGCGAAUUCCGAAAAGCUGUGAGAGAGUAGGAG
.....((......)..)..((.(.......)).).
>URS0000D669A0_12908/1-36
AGCGAGGAAGCCGAAAAUCGCAUCAAAGAGUAGGCA
.....((......)..)((...(.....)).)....
>URS0000D6B225_12908/1-35
ACGGAGGCCGCCGAAAAUCCAGAACAGAGUAGGCA
.....((......)..)(.(..(......)..).)
>URS0000D69395_485918/1-36
UAUGGGGAAGCCGAAAACCAUCGAAGAGAGUAGGCA
.....((......)..)(.(..(.....)....).)

>URS0000D659A5_12908/1-35
UUGGGAAUUGCCGAAAACCCAUAAAAGAGUAGGCG
.....(.(.....)..)..................
.....(.(.....)..).....(......).....
((...........)..)((..(.....)).)....
>URS0000D69F87_313606/1-37
AAAGCGAUUGCCGAAAAGCUGUAUAAAAGAGUAGGCA
....(..(......)..)...................
....(..(......)..).....(.....).......
....(..(......)..).(.(.(.....)....).)
>URS0000D67347_12908/1-33
UACGAGUAAUCCGAAAAUCGAUAAGAGUAGGAA
..............(.(......)..)......
((...........)..).....(.......)..
((...........)..)((.(......)..).)
>URS0000D68CDD_12908/1-35
GAUGAGGAUGCCGAAAAUCAUAAAGAGAGUAGGCA
..............(...(......)..)......
........((...)..).....(......).....
........((...)..)(.(..(......)..).)
>URS0000D6955E_12908/1-35
AAUGGAAUUUCCGAAAACCAUUAAAAGAGUAGGAA
..............(...(......)..)......
.....(..(....)..).....(......).....
.....(..(....)..)..((.(......)..).)
>URS0000D6A645_12908/1-36
CGCGGGAAUGCCGAAAACCGUGGAAAAGAGUAGGCU
..............(....(......)..)......
.....(.(.....)..).....(.....).......
.....(.(.....)..)((...(.....)).)....
>URS0000D68BC1_700598/1-36
AGUGGGAUUCGCCGAAAACCAUUAAAAGAGUAGGCA
...............(...(......)..)......
.....(..(.....)..).....(......).....
.....(..(.....)..)..((.(......)..).)
>URS0000D664FA_313606/1-36
UCAGGGGACUCCGAAAACCUAGCAAUAGAGUAGGGA
.................(.(......)..)......
((...........)..).....(......)......
((...........)..)((...(......)...).)
>URS0000D68550_743722/1-36
UAGGGCGUAACCGAAAACCCUUGAUCAGAGUAGGCA
.....((......)..)...................
.....((......)..).....(.......).....
.....((......)..)(.(..(.......)..).)
>URS0000D6B61B_12908/1-38
GUGGAGAAAACCGAAAAUCCAAAAUAACAGAGUAGGUA
.....((......)..).....................
.....((......)..).....(.......).......
.....((......)..)(.(..(.......)....).)
>URS0000D6BEF8_12908/1-33
AAUGAGGUUGCCGAAAAUCAUUAAGAGUAGGCA
.....((......)..)................
.....((......)..).....(.......)..
.....((......)..)((..(.....)..).)
>URS0000D6D2F9_12908/1-33
AGGGGGGUAGCCGAAAACCCUGUAGAGUAGGCA
.....((......)..)................
.....((......)..).....(.......)..
......((.....)..)((..(.....)..).)
>URS0000D68AAA_12908/1-36
ACGGCAGAUUCUGAAAAGCCGGUAACAGAGUAAGAG
.....((......)..)...................
.....((......)..).....(.....).......
.....((......)..)((...(.....)).)....
>URS0000D6C55D_12908/1-35
GAUGGGGUAUCCGAAAACCAUUGAAAGAGUAGGAA
.....((......)..)..................
.....((......)..).....(.......)....
.....((......)..)((...(.......).).)
>URS0000D6D3EA_12908/1-35
CUGGUGUAACCCGAAAAACCACAAAAGAGUAGGGA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)((...(......)..).)
>URS0000D6AA57_12908/1-35
AAUGGAGUUUCCGAAAACCAUCAAAAGAGUAGGAA
..............(...(......)..)......
........((...)..).....(......).....
........((...)..)..((.(......)..).)
>URS0000D664C6_12908/1-35
UUGGUGGUACCCGAAAAACCAUAAAAGAGUAGGGG
.......((.....)..).................
.......((.....)..).....(.....).....
((...........)..)((..(.....)).)....
>URS0000D69E97_694427/1-35
ACAGCGUAACCUGAAAAGCUGCAAAAGAGUAAGGA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)((...(......)..).)
>URS0000D6CB64_12908/1-36
UGCGGGUAAGCCGAAAACCGUAUCAGAGAGUAGGCA
.....((......)..)...................
.....((......)..).....(.....).......
.....((......)..)((...(.....)....).)
>URS0000D66682_12908/1-34
AAGGUGGAUGCCGAAAAACCUGAAAGAGUAGGCA
.....((......)..).................
.....((......)..).....(.....).....
.....((......)..)(.(..(.....)..).)
>URS0000D6C871_12908/1-36
UAUAGGGUAGCCGAAAACUAUUUAAAAGAGUAGGCA
..............(....(......)..)......
(.(..........)..).....(.....).......
(.(..........)..).((..(.....)).)....
>URS0000D6C8C9_12908/1-38
AGGGAGGUAGCCCAAAAUCCCACACAACAGAGUAGGCA
.....((......)..).....................
.....((......)..).....(........)......
.....((......)..)(.(..(........)...).)
>URS0000D6B096_12908/1-35
AUGCAGGAAGCUGAAAAUGCAAAACAGAGUAAGCA
.....((......)..)..................
.....((......)..).....(......).....
.((..........)..)(.(..(......)..).)
>URS0000D6CAAC_12908/1-39
CAGGGGAAUGCCGAAAACCCUUUUGCAACAGAGUAGGCG
.....((......)..)......................
.....((......)..)......(.......).......
.....((......)..).(.(..(.......)).)....
>URS0000D6CEAC_12908/1-36
ACGGAGUAUCCCCGAAAAUCCGGAAUAGAGUAGGGA
.....(..(.....)..)..................
.....(..(.....)..).....(......).....
.....(..(.....)..)(.(..(......)..).)
>URS0000D6B923_12908/1-35
UGGGAGGAGUCCGAAAAUCCCAAACAGAGUAGGAA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)(.(..(......)..).)
>URS0000D677A1_12908/1-36
ACGGAGGUUCCGAAAAUCCGAGAAAUAGAGUAGGAA
..................((......)..)......
.....(.(....)..).....(......).......
.....(.(....)..)(.(..(......)...).).
>URS0000D69C2C_12908/1-36
AGCGCGGCAGCCGAAAAGCGUUUAACAGAGUAGGCG
.....((......)..)...................
.....((......)..).....(.....).......
((...........)..)((...(.....)).)....
>URS0000D6B57B_12908/1-35
UUGGGAGAUUCCGAAAACCCUUAAGAGAGUAGGAU
..............(...(......)..)......
((...........)..).....(......).....
((...........)..)((..(.....)...).).
>URS0000D66999_12908/1-33
GUAGGGGAUUCCGAAAACCUAUUAGAGUAGGAA
.....((......)..)................
.....((......)..).....(........).
((...........)..)((.(......)..).)
>URS0000D66B45_12908/1-35
UAGGCAGUAUCCGAAAAGCCAGAACAGAGUAGGAC
....(..(......)..).................
....(..(......)..).....(.....).....
....(..(......)..)..((.(.....).).).
>URS0000D65C41_12908/1-35
AUGACGGGUUUCGAAAAGUCAUAAUAGAGUAGGAA
....(..(......)..).................
....(..(......)..).....(.....).....
....(..(......)..)((...(.....)..).)
>URS0000D6BDBA_525257/1-36
AUGGCGGCAUCUGAAAAGCCAUUAAAAGAGUAAGAA
.....((......)..)...................
.....((......)..).....(.....).......
.....((......)..)(.(..(.....)....).)
>URS0000D67759_12908/1-35
AUGGAGUAUGUCGAAAAUCCAUAAGAGAGUAGGCA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)(.(..(......)..).)
>URS0000D665F6_12908/1-35
AUAGAGGUAGCUGAAAAUCUAUAAAAGAGUAAGCA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)((...(......)..).)
>URS0000D6722D_700598/1-37
GGCGGGGAAGCCGAAAACCGUUAAAAUAGAGUAGGCC
.................(..(......)..)......
((...........)..).....(......).......
((...........)..)((...(......)).)....
>URS0000D69D8D_12908/1-34
ACGGAGGUUCCGAAAAUCCAAGAAAGAGUAGGAA
.............(...(......)..)......
.......((...)..).....(......).....
.......((...)..)(.(..(......)..).)
>URS0000D67F52_700598/1-35
UUAGGGGAUACCGAAAACCUAAAACAGAGUAGGUA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)((...(......)..).)
>URS0000D65B42_12908/1-35
AUGACGGGUUCCGAAAAGUCAUAAUAGAGUAGGAA
....(..(......)..).................
....(..(......)..).....(.....).....
....(..(......)..)(.(..(.....)..).)
>URS0000D666D4_1189621/1-34
CUGGAGUAUCCCGAAAAUCCAUAAAGAGUAGGGA
..............(..(......)..)......
((...........)..).....(.....).....
((...........)..)(.(..(.....)..).)
>URS0000D68B64_12908/1-35
AAAGGAAAUGCCGAAAACCUUCAAAAGAGUAGGCA
..............(...(......)..)......
((...........)..).....(......).....
((...........)..)..((.(......)..).)
>URS0000D6943E_12908/1-35
UAAGGAGUCGCCGAAAACCUAUAAAAGAGUAGGCA
..............(...(......)..)......
......((.....)..).....(......).....
......((.....)..).((..(......)..).)
>URS0000D6B5D0_12908/1-35
AAUGGAAUUUCCGAAAACCAUCAAAAGAGUAGGAA
..............(...(......)..)......
((...........)..).....(......).....
((...........)..)..((.(......)..).)
>URS0000D681C2_12908/1-35
ACAGCGAAUUCCGAAAAGCUGUGAGAGAGUAGGAG
.....((......)..)..................
.....((......)..).....(.......)....
.....((......)..)..((.(.......)).).
>URS0000D666B1_12908/1-35
AAAGAGGCACCUGAAAAUCUUAAAAAGAGUAAGGA
..............(...(......)..)......
(.(..........)..).....(......).....
(.(..........)..)(.(..(......)..).)
>URS0000D6743F_313596/1-35
CGGGAGGAUUCCGAAAAUCCGGAAAAGAGUAGGAG
...............((......)..)........
........((...)..).....(......).....
........((...)..)(.(...(.....).).).
>URS0000D698E0_12908/1-35
GAGGCGGCAACCGAAAAGCCAUAAGAGAGUAGGUA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)(.(..(......)..).)
>URS0000D68434_700598/1-35
ACAGGGUUGGCCGAAAACCUGAAACAGAGUAGGCA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)..((..(.....)..).)
>URS0000D65B37_391587/1-35
AAAGGGUAAACUGAAAACCUUUAACAGAGUAAGUA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)(.(..(......)..).)
>URS0000D682B9_12908/1-35
UAGGCGGUGCCCGAAAGGCCUUAAAAGAGUAGGGA
....(.(......)..)..................
....(.(......)..).....(......).....
....(.(......)..)(.(..(......)..).)
>URS0000D6611F_12908/1-35
UAGGAGUAUGCUGAAAAUCCUAAAAAGAGUAGGUG
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)((.(......)).)....
>URS0000D658ED_12908/1-35
UCGGGGGAUGCCGAAAACCCGCAACAGAGUAGGCA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..).((...(.....)..).)
>URS0000D68A30_12908/1-35
ACGGAGGAAGCCGAAAAUCUGAUCAAGAGUAGGCA
..............(...(......)..)......
((...........)..).....(......).....
((...........)..)(.(..(......)..).)
>URS0000D6BA48_946077/1-34
UAGGUGGAAGCUGAAAAACCUUAAAGAGUAGGCA
.....((......)..).................
.....((......)..).....(.....).....
.....((......)..)(.(..(.....)..).)
>URS0000D6CE16_12908/1-35
UUGGCACAUUCCGAAAAGCCUAAACAGAGUAGGAA
..............(...(......)..)......
((...........)..).....(......).....
((...........)..)((...(......)..).)
>URS0000D66166_12908/1-35
UCAGGGGAAGCUGAAAACCUGUAACAGAGUAAGCA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)(.(..(......)..).)
>URS0000D6684A_12908/1-35
AAAGAGAUCCCCGAAAAUCUAUAAAAGAGUAGGGA
..............(...(......)..)......
.......((....)..).....(......).....
.......((....)..)..((.(......)..).)
>URS0000D661B1_12908/1-35
AAAGACCAAGCCGAAAAUCUUUAAUAGAGUAGGCA
..............(...(......)..)......
((...........)..)....(.....).......
((...........)..)((..(.....)).)....
>URS0000D68BD5_12908/1-35
AUAGAGGCACCCGAAAAUCUGUAAAAGAGUAGGGA
..............(...(......)..)......
((...........)..).....(......).....
((...........)..)(.(..(......)..).)
>URS0000D6C9D2_620914/1-36
AGGGGGGAAGCCGAAAAACCUUUAAUAGAGUAAGCA
.....((......)..)...................
.....((......)..).....(.....).......
.....((......)..)(.(..(.....)....).)
>URS0000D6B026_12908/1-37
UAGGUGGAUUCCGAAAAACCUGUAAAUAGAGUAGGAU
.....((......)..)....................
.....((......)..).....(.......)......
.....((......)..)((...(.......)..).).
>URS0000D6919A_485917/1-35
AUGGCGAACGCUGAAAAGCCUUAACAGAGUAAGCA
.....(.(.....)..)..................
.....(.(.....)..).....(......).....
.....(.(.....)..)(.(..(......)..).)
>URS0000D6AABF_485917/1-40
CAGGUGGAAGCCGAAAAACCUGAUUAAAACAGAGUAGGCA
.....((......)..).......................
.....((......)..)......(........).......
.....((......)..)(.(...(........)....).)
>URS0000D68644_12908/1-36
UAGGCAGUAUCCGAAAAGCCUUCAAUAGAGUAGGAG
....(..(......)..)..................
....(..(......)..).....(......).....
....(..(......)..)..((.(......).).).
>URS0000D66A76_391587/1-36
AAGGUGUAAGCUGAAAAACCUAAAAUAGAGUAAGUA
.....((......)..)...................
.....((......)..).....(.....).......
.....((......)..)((...(.....)).)....
>URS0000D67A39_485918/1-37
UAUGGGUAUGCCGAAAACCAUCAGAAAAGAGUAGGCA
.................((......)..)........
(.(..........)..).....(......).......
(.(..........)..)(.(..(......)).)....
>URS0000D69A65_12908/1-38
AUGGUGGAUUCUGAAAAACCUAUAAAACAGAGUAGGAA
.....((......)..).....................
.....((......)..).....(........)......
.....((......)..)((...(........)...).)
>URS0000D6A768_12908/1-36
UACGGGGAACCUGAAAACCGCAUAAUAGAGUAGGGA
.....((......)..)...................
.....((......)..).....(.....).......
((...........)..)(..(.(.....)....).)
>URS0000D6A129_12908/1-33
AAGGGAGAAACCGAAAACCCAUUAGAGUAGGUA
.....((......)..)................
.....((......)..)....(......)....
.....((......)..)((..(......).).)
>URS0000D6AA95_12908/1-39
AAGGAGGUUACUGAAAAUCCUUGAAUAAUAGAGUAGGAA
.....((......)..)......................
.....((......)..)......(.......).......
.....((......)..)(.(...(.......)).)....
>URS0000D67241_12908/1-36
AGAGAAGAUGCCGAAAAUCUCAUCAAAGAGUAGGCA
...............(.(......)..)........
........((...)..).....(.....).......
........((...)..)((...(.....)).)....
>URS0000D6AA3A_12908/1-35
AGGGAGGUAUCCGAAAAUCCUUAACAGAGUAGGAU
.....((......)..)..................
.....((......)..).....(......).....
((...........)..)((..(.....)...).).
>URS0000D6BC65_12908/1-36
AGGGAGUAAGCCGAAAAUCCCAAUCAAGAGUAGGCA
.....((......)..)...................
.....((......)..).....(.......).....
.....((......)..)(.(..(.......)..).)
>URS0000D6B6D5_12908/1-38
AAGGGGUAAUACCGAAAACCCUAGAAAUAGAGUAGGUA
......((......)..)....................
......((......)..).....(......).......
.....((.......)..).((...(.....)).)....
>URS0000D6B3C6_12908/1-37
AAGGGGUAAUACCGAAAACCCUGAAAUAGAGUAGGUA
......((......)..)...................
......((......)..).....(......)......
......((......)..)((...(......)...).)
>URS0000D672D9_12908/1-36
AAGGAAGUCGCCGAAAAUCCUAUCAAAGAGUAGGCA
..............(....(......)..)......
.....(.(.....)..).....(......)......
.....(.(.....)..)((...(......)...).)
>URS0000D65ACB_12908/1-38
CAGGACGCCGCCGAAAAUCCUAUUUAAUAGAGUAGGCA
.....((......)..).....................
.....((......)..).....(........)......
.....((......)..)(.(..(........)...).)
>URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.....((......)..).................
.....((......)..).....(.....).....
.....((......)..)(.(..(.....)..).)
>URS0000D6785E_12908/1-36
AGGGAGCAAGCCGAAAAUCCCGUAACAGAGUAGGCG
.....((......)..)...................
.....((......)..).....(.....).......
.....((......)..)(.(..(.....)).)....
>URS0000D659E2_391587/1-40
ACGGUGGCAUCCGAAAAACCAACUAACAAUAGAGUAGGAA
......................((......)..)......
..((.........)..).....(..........)......
..((.........)..)(.(..(..........)..).).
>URS0000D6B5CF_12908/1-36
AUGGAGUAAGCUGAAAAUCCUUAUAAAGAGUAGGCG
.....((......)..)...................
.....((......)..).....(.....).......
.....((......)..)(.(..(.....)).)....
>URS0000D6A8B7_313606/1-36
CAGGCGAACACCGAAAAGCCUAAAACAGAGUAGGUG
.....((......)..)...................
.....((......)..).....(.....).......
.....(.(.....)..)(.(..(.....)).)....
>URS0000D66252_12908/1-40
UGGGUGCAAGCCGAAAAACCCGACAAAAAAAGAGUAGGCA
.....((......)..).......................
.....((......)..)......(.........)......
.....((......)..)(.(...(.........)...).)
>URS0000D682E3_12908/1-41
UGGGUGCAAGCCGAAAAACCCGACAAAAAAAAGAGUAGGCA
.......................((......)..)......
((...........)..)......(..........)......
((...........)..)(.(...(..........)...).)
>URS0000D6927B_12908/1-35
AUGGAGUAUUCCGAAAAUCCAGAACAGAGUAGGAA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)(.(..(......)..).)
>URS0000D6A45E_12908/1-33
GAGGCGUACUCCGAAAAGCCUUAAGAGUAGGAA
.....((......)..)................
.....((......)..).....(.......)..
.....((......)..)((..(.....)..).)
>URS0000D672E7_12908/1-38
CAGGCAGAUUCCGAAAAGCCUUUGAUAUAGAGUAGGAG
....(..(......)..)....................
....(..(......)..).....(......).......
....(..(......)..)..((.(......)...).).
>URS0000D67CC0_391587/1-36
CAGGCGUAAUUCUGAAAAGCCUCAAUAGAGUAGGAG
....(...(......)..).................
....(...(......)..).....(.....).....
....(...(......)..)..((.(.....).).).
>URS0000D6B057_12908/1-35
GAGGCGUAACCGAAAAGCCUAAGAUAGAGUAGGAA
....(.(......)..)..................
....(.(......)..).....(......).....
....(.(......)..)((...(......).).).
>URS0000D688AF_12908/1-33
CCUGGGGAAGCCGAAAACCAAACAGAGUAGGCA
..............(.(......)..)......
(.(..........)..)....(.....).....
(.(..........)..)((..(.....)..).)
>URS0000D6C855_12908/1-34
GUAGCGGUAUCCGAAAAGCUAUAAAGAGUAGGAA
....(..(......)..)................
....(..(......)..).....(.......)..
.(.(.........)..)(.(..(.....)..).)
>URS0000D6599F_12908/1-35
UUAGGGAAAGCCCAAAACCUAUAAAAGAGUAGGCA
.................(.(.....)..)......
((...........)..).....(......).....
((...........)..)(.(..(......)..).)
>URS0000D67854_12908/1-36
UAGGCGAAUUCCGAAAAGCCAAUGAGAGAGUAGGAG
.....((......)..)...................
.....((......)..).....(.....).......
.....((......)..)(.(..(.....)...).).
>URS0000D6BB72_12908/1-35
GAAGAGGUGCCCGAAAAUCUUUGAAAGAGUAGGGA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)(.(..(......)..).)
>URS0000D6817C_12908/1-33
ACUGCGGACUCCGAAAAGCAAAAAGAGUAGGAA
..............(.(......)..)......
..((.........)..).....(.......)..
..((.........)..)((..(.....)..).)
>URS0000D68B42_12908/1-33
AAGGGCGAAGCCGAAAACCCAAUAGAGUAGGCA
..............(.(......)..)......
((...........)..)....(.....).....
((...........)..)((..(.....)..).)
>URS0000D6AD4B_12908/1-35
AAUGCAGAUGCCGAAAAGCUAUAAUAGAGUAGGCA
..............(...(......)..)......
........((...)..).....(......).....
........((...)..)(.(..(......)..).)
>URS0000D6A58D_12908/1-35
AGGGCGGAACCCGAAAAGCCCGAACAGAGUAAGGA
.....((......)..)..................
.....((......)..).....(......).....
.....((......)..)(.(..(......)..).)
>URS0000D68223_12908/1-35
AAUGAGGUAGCCGAAAAGCAUAUAUAGAGUAGGCA
..............(...(......)..)......
..((.........)..).....(......).....
..((.........)..)((..(.......)..).)
>URS0000D667B8_12908/1-41
CCGGCGGAUUCCGAAAAGCCAUUCAGAAAACAGAGUAGGAG
.......................((......)..)......
(.(...........)..)......(........).......
(.(...........)..)..(..(...(.....)...).).

ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio
1 ((A)RA)R < 0.001 8.56
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
1234567890123456789012345678901234
2 (.NRNAG.) < 0.001 43.1
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
1234567890123456789012345678901234
3 ((G)N)A < 0.001 3.9
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
1234567890123456789012345678901234
ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio

NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio
1 (.AA.) < 0.001 3.85
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
1234567890123456789012345678901234
2 R(NAR)N < 0.001 5.91
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
1234567890123456789012345678901234
3 ((R)RN)A < 0.001 5.8
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
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4 .N. < 0.001 2.61
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
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5 .NARAG. < 0.001 90.1
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
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6 .GAAAA. < 0.001 56.8
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
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7 ((U)A)G < 0.001 8.3
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
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8 (.RA.().AG.) < 0.001 27.9
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
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9 (.Y.()().C.) (URB) < 0.001 0.0011
10 N(CN)R < 0.001 2.12
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
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11 R(RN)C < 0.001 1.9
URS0000D6C890_12908/1-34
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
CGGGUGAAAGCCGAAAAACCCAAAAGAGUAGGCA
.........1.........2.........3....
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NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).