D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major

D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences

J. Mol. Biol., 435 (2023)

ydaO/yuaA leader (Rfam: RF00379)

Options

Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN

Rfam

D-ORB

Augmented

(.RA.()())
(.YU.)
(()(G)N)N

90.2
99.0
97.1

% of positive sequence with ORB

Job*

Email*

Sequence(s)*

Obtain

One structure matching the consensus structure ORBs
Several structures containing instances of most discriminative ORBs

Up to structures per sequence

Position offset nucleotides

Job*

Email*

Wildtype sequence*

Mutant sequences

All SNPs
Submit mutant sequences

Use the mutation generator

Deep neural network:

5-fold cross-validation: 96.8 %
(± 0.903 %)

Testing accuracy: 68.3 %

Decision tree:

5-fold cross-validation: 83.4 %
(± 4.8 %)

Testing accuracy: 76.5 %

D-ORB structure

D-ORB structure decision tree:

5-fold cross-validation: 78.7 %
(± 2.48 %)

Testing accuracy: 71.5 %

of CP000612.1/2967251-2967121

CP000612.1/2967251-2967121

UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU
.((((((((.(((((((((((....)))))(((.((..))(((((((((((((...(((((..))).)).((((((((...))..))))))))))))))..)))))))))))))).((..)).))))))))
...................................................................................................1...............................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3.
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abstract shape: `((()(()()))())`

					Number of sequences
	Structure	ORBs			(out of 102)	(%)
1		(.RA.()())			80	78.4
>BA000043.1/224415-224554 GAAUAUUUAGCGCUGAAUCCGUCAUGGAGCGGGGGACCCACUUGUUGCAACGCUCGUUGCUAGGGGUGAAUCCGAAAGGACGGGCAUCUCUCCAAGCCCGAACCCGACAGCUAACCUCGCAAGCGCUUUGGGGAGGGACG .............(..(....)..(....................................................................))............................................. >AL939120.1/174742-174619 CCAGGUAAGUCGCCGCACCGGUCACCACCGGAGCGGCUCGGGGUGAAGCCGUACCCGUCAGGGCACGGCCGGGCACCUCCCCGCCCGAACCCGACAGCUCACCUCGCAGGCGUAAGGAGAGGGA ...........................................(...(....................)(................)).................................... >CP000764.1/713115-713260 AACCUUAUAUCGCUGAGUCCAAUGAUUUGGAGCGGGGGAACCAAUUUUGUGCAUUGUCACUUGGGGUGAAUCUUUCAUGAUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACUUCGUAAGCGUUUGGAGAGGAGGU ...................................................................(..(...............)(..................))...................................... >CP000726.1/1414382-1414259 AAACAAAUCAUGCCGAAUCUUCUUUAUGAAGUACCGGGGAUACUCUUGGGGUGAAUCUCUUAGGAAUAGGGUACCUCUAACCCGAACCCGUCAACUAACCUGGGAGGCAAUAUGGAGGGAUUUA ...................................................(..(..........)(.................))...................................... >AP008230.1/891859-892004 UGCAGUCAAGGCUGAAUUUCCCAAAAAGGAAAACGGGGGAACCAUAUUGGGGGUGAAUCAUUGUUAAGGAGAGCAAACUCCUUAAAAUGACGGAAAGGUAUCAUUCCGAACCCGGCAGCUAACCUCGUAAGCGUGUGAACCGUUUU .....................................................(...(...............................)(................))..................................... >CP000382.1/667370-667242 AUCUGAACAAUGCCGAAUCUCCAUUUGGAGUACGGGGGAUAUAUUUUGGGGUGAAACUUAUUUUUAUAUAAGUAGGGUUCCUCAAUCCUAACCCGUCAACUAACCUCGGAGGCAAAACGAGGAGGAAAU ...................................................(...(................)(..............))....................................... >CP000141.1/2221513-2221384 AUUAACCAAACGCUGAAUUCCCGUUACGGGAAGCGGGGGAACCACUUUUUGGGGUGAAUCCUUUUCAGGUAGGGCGACUCCUUCCGCCCGAACCCGUCAGCUAACCUCGUAAGCGUCGAAGGGGGAGCAA ..............(..(.............)(...............................................................))................................ >AL939125.1/103160-103305 AGUCCCCGUACGGCGCGAGCCAGGGGAGCCGGGGACCCAUCGCAGUCCCUGGGGUGAAUCGGACGCCCGCGCGCACCGCGAGGGGGUCCGUAGGAGACCUUCCACCUCCGAACCCGUCAGCUAACCCGGUAGGCGAGAGGGAAGGA .......................................................(..(...............................).(........))........................................... >AAEK01000002.1/19276-19421 AACCUAAAAUCGCUGAGUUCUAGAAAUGGAGCGGGGGAACCAAUUUUGUGCAUUGUCACUUGGGGUGAAUCUUUCAUUUUUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUUAGAGAGGAGGU ..................................................................(..(................)(..................))...................................... >AF299117.1/4182-4326 UGUAGUCAAGGCUGAAUUUCCCAAAAAGGAAAACGGGGGAACCAUAAUGGGGGUGAAUCACUUUUUAGGAGUUAAACUUCUUGAAGUGACGGAAAGGUAUCAUUCCGAACCCGGCAGCUAACCUCGUAAGCGUGUGAACCGUUUU .....................................................(...(..............................)(................))..................................... >BX927150.1/172169-172001 CAUUCAUGUGGGCCAUAUUGCAGACAGGGACGGGGAAACCACCCACCAUCUUUUCACAAAAGAAGGCAUGGAGGCCAACUCCUUGGGGUGAAGCCAGACAUCCACUGGCAGAGCAACUCCUCCGCUCUAACCCGACAGCUAACCUCGACGGCGACAAAUGAGAGGAAAA .........................................................................................(..(...............)(.................))........................................ >AP008230.1/1719300-1719165 UUAUAAUAAACGCCUAAUCUGGGGUAUCCUAGAGCGGGGGACUAAAUUUCUGGGGUGAAUCGCACCUCCUGUGCGUAGGGCUUACACUUUCGCCCGAAUCCGUCAACUAACCCCGUAGGCUAAGAAAGGUGUCUGA ..............(..(..............)(.................................................................................))................... >CP000478.1/2207806-2207671 CCGGAGUAAUCGCCGAGUCCUGCAUGGGCAGGAGCGGGGGAACCGAGUUUUUGGGGCGUAUCGCCGAUCAUGGCGAAGGGCAAGCUCUUCGGCCCGAGCCCGUCAGCUAACCUCGCAGGCGUCGAAGGGUAGAGCC .............(..(................)(...............................................................................)..).................. >CP000612.1/2967251-2967121 UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU .....................................................(..(.............)(.................))........................................ >AE017225.1/3137586-3137727 UAAAACCUUUUGCUGAGUCCAAAUUUUGGAGCGGGGGAACCACUUUUGUAGCUAUGCUACUUGGGGCGAAUCUUUUUUAAGUAGGGAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG ....................................(.....(.....................)(............................)).............................................. >CP000721.1/3440152-3440282 AUAAUUAUAACGCUGAAUCUUUUUGAACGGGAGAACCAUUUUUUGGGGUGAAUCUUAUUUUAGGAUAAGUAGGGUUAUUUUCUUCAAUCCGAAUCCGUCAGCUAAUCUCGUAAGCGUUGAAGAGAAGUUUU .............(...(...............)(..................................))............................................................ >BA000004.3/632283-632434 CACCUUUAAUCGCUGAAUCUCUAUUGAGAGCGGGGGAACCAUACCUGACAGAGUUGUUUCUGUCUUGGGGUGAAUCUUAUGUUUUUUAUAAGAAGGGAUACUCUCCAUCCCUAAUCCGACAGCUAACCUCGUAAGCGUUGAUUCGAGAGAGG .......................................................................(..(.................).(.........)).............................................. >AE015927.1/2209149-2209011 AUACGUACUAUGCUGAAUCCUAUUUAAAAAAAUAGGUACGGAGGAACCAAGAAAUAGGGGUUAAUCUUUAAAUGUUUAAAGAAGGGAAAACCUUGACCUAACCCGUCAGCUAACUUCGGAAGCAAGAAAGGUGGAAAAA .............................................................(..(................)(...............))....................................... >AAOX01000019.1/14342-14479 UCGAAAGAUGCGCUUAAUCUUUUAAAGAGCGGGGGAUCCAACCGGCAUACACAUGCCUCGGGGUGAAUCCUUUACAGGUAGGGCACUCUCAAAGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUAUUGAGAGGACAA ......................................(...(..............)(..................................)...)........................................ >AAXV01000026.1/33590-33441 AUUUCUAAAUCGCUGAAGCAAACUAGACGCGGGGGACCCAUUUUAGACGGAGUGCAUAAGCAAUCCUUGGGGUGAAUCUCUUCUUUUGAAGGGUAGGGCUACUCAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUAAGAGCAGAUAA ...................(..(......................).(..............................................................)..).................................... >AAWL01000006.1/97044-96924 AGCUAUAUAAAGCCUAAUCCAGCUCAGGAGCGGGGGAACCAUUACUGGGGUGAAACUCUUUAGGAGUGGGGUGCCUUCAACCCUAACCCGUCAGCUAACCUCGUCGGCUUAGAGAGGAGAA ...................................................(..(...........)(...............)).................................... >AAOX01000003.1/202757-202896 UGACCUGAUCCGCUGAAUCCAUACAGAACGGAGGACCCAACUGAUUAUUCCAGAAUAAUUAUGGGGUGAAGCCGAAAGGCCGGGGGACUUCUGCCUUCCGAACCCGUCAGCUAACUUCGUAAGCGUUGCAGGAGAGAGGA ...................................(....(.....................)(........................................)).................................. >AP008230.1/5140258-5140118 AAUUAAGUGAAGCUGAAUCUGAGGUACAAAGCCUCAGAACGGGGGAAACGUCACGUGGGGUGAAUCGCAGGAUAUUGCGUAGGGCAUACACCUUUUGCCCGAAUCCGUCAACUAACCUCGUAAGCAGGAAAGGUGGUCAAA ............................................(..(.......)(....................................).)............................................. >AP006840.1/606473-606333 CGUCCACAAACGCUGAAUUCCCACCAGGAAACGGGGGACCCAGAAUCCACCAGGGGCCAAGCGCAGUGGCUUCACUGCCCGGGCGACACUCCUGCCGUCCGCGCCCGUCAGCUAACCCCGUAAGCGUCGCAGGGGGAGACC .........................................................(..(.................)(....................))....................................... >AAWL01000001.1/57092-56953 AACAAAGCAAAGCCGAAUUCCGUAUGGAAGCGGAGGACCCACCUUUUUGGGGUGAAUUCUGCCACAAGCAGAAAGGAUGUUUACCUCUCUUGCCAUCCUAACCCGACAGCUAACUUCGUAGGCUAAAGCAAAGAGGUCGA .....................................................(..(...............).(......................))......................................... >AL939115.1/44787-44621 UCGCGUCAAGCGCCGAAGGCAGGAGCGGGGGACCCAAGGUAAGUGCCGCACCGGGCAGUUGAGCCGGAGCGGCUAGGGGUGGAGCCGAGUUCCGCGAGGAACCCGGCCGGGCAACUCAACCGGCCCGAACCCGACAGCUCACCUCGCAGGCGUCGGUGAGGGGAUCA ................................................................................(..(......................).(......)).................................................. >CP000764.1/2226760-2226900 UAAAACCUUUUGCUGAAUCCACUAUGUGGAGCGGGGGACCCAUUUUUGUAGCAUUUGCUACUUGGGGCGAAUCUUUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGGA ..............(..(...........)...(..........................................................................))............................... >CP000721.1/1710119-1709985 AUAUAUGUAACGCUUAAUCACUUUGAACGGGAGAACCAUUUUUUGGGGUGAAUCUUAUUACACGAUAAUAAGUAGGGUUAAUUUUCUUCAAUCCGAAUCCGUCAGCUAAUCUCGUAAGCGUAGAAGAGAAGUUUU .............................(..(.......)(......................................................).).................................... >BA000028.3/1706087-1706245 CCUUUUUAGUCGCUGAAACUGUUGCUUUAGUAUUGUGCAGUGCGGGGGACCCAUUUUUGGCAAUAAAACAUUUGUCUUGGGGUGAAUCUAAAUAUUUAGAAGGGAUACUUUAUGUCCCUAAUCCGACAGCUAACCUCGUAAGCGUCAUAGGGAGAAAAG ...................................................................................(..(............)(.................))....................................... >AE017180.1/2728254-2728393 ACAUUCAUGCAGCCGAGAUCCGUUCGCGAGAACGGGUGCGGGGGACCCACUUCGGGGGCGUAUUCCGGCAAUGGCGCCGGAUAGAGGACUUUCAGCCUCGAGCCCGUCAGCUAACCUCGUAGGCAUCUGGAAGGGCACGA ...............(...(..............)(...............................................................................))....................... >CP000673.1/658090-657951 CUAUAAAACAAGCCUAAACUUCCAAAACUGGAAUCAAGUGCGGGGGAUAACAAUAUUUGAGGUGAAUCUUUUUAUUAAAAAGUAGGACAAUCCCUCUCCGAACCUGUCAACUAACCUCGUAGGCUAAUUAGGGAGGAUAU ...............................................................(..(................)(.......)).............................................. >CP000232.1/2197504-2197633 UAUUUUUUAGCACCGAAUUCCCGGGUAGGCGGGAAACGGGGGAUAUUUUUGGGGUGAAGAGCCAAAGGCUCCGGGCUAACUCUCGGUCCGAACCCGUCAACUAACCUCGUAGGUGUGCGAGAGUGGAGGU ......................................................(..(.............)(...............).)....................................... >CP000481.1/2373007-2372860 ACGUCGGAGCCGCCGAACCUGCCUCGCAGGACCGGGGACCCAGCACCGGCGCACAGCGCCCAGGGGUGAAUCCGGUGUUCGCACCGGUAGGGCGAUCUUCCCCGCCCGAACCCGUCAGCUAACCCGGUAGGCGGUCAAGGGAGAGAGG .....(..(............................)(....................................................))....................................................... >AAJM01000133.1/9684-9540 AACCUUAAAUCGCUGAGUUCCAGAAAUGGAGCGGGGGAACCAAUUUUGUGCAUCGUCACUUGGGUGAAUCUUUCAGUUUUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUUAGAGAGGAGGU .................................................................(..(................)(..................))...................................... >CP000232.1/459162-459290 AAUAAGCGAGCGCUGAAUCCCUGAAUAGGGAACGGGGGAACCACUUCUUGGGGUGAAUCCUUUUUCAGGUAGGGUUAACUUUCGACCCGAACCCGGCAGCUAACUUCGUAAGCGUAGAAAGGUGAGGUG ............(...(..............)(.............................................................))................................. >AAFX01048773.1/685-551 ACAACUAAAACGCUCAAUUCCCGAGAAGGGGAGCGGGGGACCCAAUCCGUUGGGGCGAAUGGUCCGCUUGGACCUAGGGCAAGCUCUUCAUGCCCGAGCCCGACAGCUAACCCCGUAAGCGUGGCGAGAAGAGCU ........................................................(..(..............)(...................))...................................... >CP000764.1/711905-712051 GUUUUUGUAACGCUGAGUCCAAUGAUUUGGAGCGGAGGAACCAAAUGGUGCAUGGUCACUAGGGGUGAAUCUUUCAUGAUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUUUUGAGAGAGGGUGG ....................................(..(........)(.......................................))........................................................ >AE017194.1/3159877-3160019 UAAAACCUUUUGCUGAGUCCAAAAUUUGGAGCGGGGGAACCAUUUUUGUAGCUUUGCUACUUGGGGCGAAUCUUAUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG ...................................................................(..(..........)(...........))............................................... >AAOX01000002.1/156408-156546 AAAAUGAAUCGGCUUAAUCUCAUAUUGAGAGCGGAGGAACCAAUUUUUGGGGCUAAUCCUGCAGGAAGCAGGAGGGAUGAGAAUGAUCUUUCGCCAUCCUGCCCGUCAGCUAACUUCGUCGGCUAAAGCGAGUGAGGUC ....................................................(...(...............)(.........................))...................................... >AAES01000021.1/15273-15418 AACCUAAAAUCGCUGAGUUCCAGAAAUGGAGCGGGGGAACCAAUUUUGUGCAUCGUCACUUGGGGUGAAUCUUUCAGUUUUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUUAGAGAGGAGGU ....................................(...(........................................)..(.......................)).................................... >CP000232.1/1412184-1412326 UAUCCUGGAACGCUGAAUUGCGGUGUGCAGCCGUAAGCGGGGGACCCAAUUUCCCGGGGUGAAUCUUGCCGGUUAUACCGGUGGGUAGGGCUAGACGUGGCCCGAAUCCGUCAGCUAACUUCGUAAGCGUGAAGGGAAUACCG .........................................(..(.......................................)(..................))..................................... >AAWL01000002.1/117860-117729 AUACUAAACGUGCCGAAGUUCCUUCAAAGGAACACGGAGGAACCAUUACUGGGGUGAAUCCGCACAUGCGGUAGGGAUUUCCCUUAUCCCGAACCCGUCAGCUAACUUCGUAGGCAGAGAAAGGGAGUGGUU ......................................................(..(.............)(.................))........................................ >AE001437.1/3232090-3232211 UAUCAUUAGCCUAAAUUUUAAAAACGGGGAAACCAAUUUUUGGGGUGAAUCGCAUAAUAUAUGCGUAGGUUUGUGCCUUUACCGAAUCCGUCAGCUAACCUCGUAGAAUAAAAGGAGGAAGA ..............................................(..(...............)(..........).).......................................... >AAOX01000003.1/202929-203071 AGCACUGAAACGCUGAAUCUUAUUGAGCGGGGGAACCAACUUUUGACUGCAUGCUGCAGUCUUGGGGUGAAGCCAUGAAUGGCAGGGAGACUCUUACCUUCCUAAUCCGACAGCUAACUCCGUAAGCGUUGUUUAAGAGAGUG ...................................................................(...(..........)(..................))....................................... >CP001348.1/872452-872592 GUACAAAAUAUGCUGAAUCCUUGUGAUUUAUGACGAGGUACGGAGGAACCAAGAAAAGGGGGUUAAUCCAUUUUAUAUGGUAGGGUGAUCCUAUUACCCGAACCCGGCAGCUAACUUCGGAAGCACAGUAUAGGAGGAAUA .............................................(..(..............................)(...................))....................................... >AE008691.1/1853404-1853270 UAAUCGUUAUCGCUGAACCCGAAAAGGGGCGGGGGACCCACACUUUUGGGGCGAAUCUCUUCCUACGGGAAGAGUAGGGUUACUCCUUCGACCCGAGCCCGUCAGCUAACCUCGCAAGCGUGGGAAGGAGAAAUA ....................................................(..(..................)(..................))....................................... >CP000667.1/3890461-3890591 GCGGGGCCACCGCCUAAUCACCUGCCAGGGUGAGCCGGGGAACCAGGUACCUGGGGUGCAUCCGCGUCAGCGGUAGGGAUCUUCCGUCCCGAACCCGUCAGCUAACCCGGUCGGUGGUUGACGGAAGGACA ......................................(..(............)(..............................))........................................... >CP000728.1/3775383-3775509 UACUAUUAUUAGCCUAAGUUUUUUAAAACACGGGGAAACCAAAUUUUGGGGUGAAUCGUAAAAUUACGUAGGUUAUACCUUUUCCGAACCCGUCAGCUAACCCCGUAGGCAAAAGGAGUGAGAAAAU .......................................(..(....................)(.............................))............................... >CP001336.1/3262209-3262073 AAGAAAUGUGGGCUGAAUCCGGACCGUGUGUCUGGAACGGGGGAUAAUCUUUUGGGGUGAAUCGCAGUCAUGCGUAGGGCUUGCACCUUUUUGCCCGAAUCCGUCAACUAACCUCGUAAGCGACGAAAGGUGGAAAA ...........................................(...(......)(........................))....................................................... >CP001083.1/1451441-1451318 AAACAAAUAAUGCCGAAUCUUCUUUACGAAGUACCGAGGAUACUCUUGGGGUGAAUCUCUUAGGAAUAGGGUACCUCUAACCCAAACCCGUCAACUAACCUGGAAGGCGAUAUGGAUGGAUUUA ...................................................(..(..........)(...........))............................................ >CP000001.1/1793577-1793723 UUUUCUAAAUCGCUGAAACCGCAUGGUGCGGGGGACCCGUUCUUAUGGAUUAGUUCUUAAUCCAAUGGGGUGAAUCCUUGAAAAAGGUAGGGCUACUCAUAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUAUAUUGAGAAGGA ..............(..(.............)(..............................................................................)..)................................ >CP000002.3/542499-542640 UAGCGCCACACGUUUAAUCCUUUAGUAGGAGUGGGGGACCCGAUCAUUUGGGGUGAAUUUUUCUGUUCCCGUGCGAACCGAAAGACGGACAUCUCUUCGUCCGAACCCGUCAGCUAACCUCAUCAACGUGAAGAGAGUCAUG ......................................................(..(..........................)(................))...................................... >AE015927.1/2711017-2711139 AAUAACAUAAGCCUAAGUUUAAAACGCGGGGGAACCAUUAAUUGGGGUGAAUCACAUUUAUUUUGUGUAGGUUAGCCUUUACCGAACCCGUCAGCUAACCCCGUUGGUAAAAGGAGUGAAUAA ..............................(......(......................)(......................))..................................... >AE001437.1/1374236-1374371 UCCUUAAGAGUGCCGAAUCUUAAUAAUAUUUAAGUACGGGGGAACACAUUGUGGGUGAAUCUUACGACUAUUCGUAAGUAGGGUGCCUUCAACCCGAAUCCGUAAGCUAACCUCGGAGGCAAAAUUGAUAAAGGAA .......................................................(....(................)(.................))...................................... >BA000030.3/5911883-5911718 AUCAAUCCACCACUCACUCACGCACGGCAGGAGCGGGGAAACCAGGUAAGUCGCCGUCCGGUCACCACGCCGGAGCGGCUCGGGGUGAAGCCGCGUCCUCGGACGCGGCCGGGCAUCUCCAGCCCGAACCCGACAGCUCACCUCGCAGGCGCCGGAGAGGAAAUUC .....................................................................................(...(..................)(...............))....................................... >AAXV01000025.1/10441-10579 AUUUAAUAAUGGCCAAAUCUCAAACAUUGAGAACGGAGGACCCAAUAUAUUGGGGUUAAUUCUGAAAUACAGAAAGGAUGAGAAACUCUUUCGCCAUCCUACCCGUCAGCUAACUUCGUCGGCUAAAGCGAAGGAGGUC ........................................................(..(.............).(......................))....................................... >CP000673.1/279064-278931 CAAUAUCAUUAGCCUAAGUUUUAUAAAAAACACGGGGAAACCAGUACUAUUUUGGGGUGAAUCGUAAUUUAUUACGUAGGUUAUGCCUUUUCCGAACCCGUCAGCUAACCCCGUCGGUAAUAAGGAGGAUAUAU ........................................................(.....(............)(...........))............................................ >AE017333.1/525158-525301 AAUCCAAAAUCGCUUAAUCUAAAAAAGAGCGGGGGAACCAUUUAGAGGCGUACAGCCUCCGGGGUGAAUCCUUUUAAAGGUAGGGCAAACUCUCGUGAGCCCGAAUCCGUCAGCUAACCUCGUAAGCGUUAAGAGAGAGGGAGA .................................(....(........................................)(......................))....................................... >AE008691.1/1020677-1020802 AGUUAAAACAUGCCGAAUCCCCGAUAAGGGGUACGGGGGAUGUAAAUUUGGGGUGAAUCCACGUAUUGUGGUAGGGUGGCCCUCACCCGAACCCGUCAACUAACCUCGGAGGCAAAGGGGGUAAAU ..........................................(..(...................)(...........................)).............................. >CP000850.1/603238-603111 GCGGUACCACCGCCCAAUCGCCGCGGGGCGGGCCAGGGAACCAGGCACAUGGGGUGAAUCCGCAUCAGCGGAGACCACUUCCGGCCCGGACCUGUCAGCUAACCCGGUCGGCGGUCAACGGAAGGGAU ..............(..(............)(...........................................................................))................... >BA000043.1/3286126-3285968 CCCUAAAGAUCGCUGAAUCCGAAUAGGAGCGGGGGAACCAACCGUGGCUUUGUGCGCCACAUGGGGUGAAUCCUGUUCAGGACGCCUGUUCUGAACGGGUAGGGUGACUCUCAUCACCCGAAUCCGUCAGCUAACCUCGUAAGCGUGUUGAGAGAAGGG ...................................................................(..(............................)(..................))...................................... >AE008691.1/927258-927390 ACAUGCUAAACGCUGAAUUCGUUAAGAAGCGGGGGACCCACUCUUUUGGGGUGAAUCCAUCUUUUAAAAGAUGGUAGGGUUAUCUUUCGACCCGAACCCGUCAGCUAACCCCGUAAGCGUUGAAAGAGAAGGA ......................(..(...................)(..............................................))...................................... >CP001348.1/597732-597876 AAUAAUUUAUCGCUGAAUUAUGGCAGUUUGACUGCUAUAAGCGGGGGAACCAUUCAAAUGGGGUGAAUCCUGUGUUAUCAGGUAGGGUUAGUCUCUUACAACCCGAAUCCGGCAGCUAACUUCGUAAGCGUUGGGGAGAAAGUGA ..............(..(.....................)(............................................................)).......................................... >CP000853.1/56237-56106 AUAUACAUAGCGCUGAAUUCUUUUAAGAAGCGGGGGAACCAUUAUUUUGGGGUGAAUCUCAUAUCUAUGAGACGGGUCAACUCUUUCGAUCCGAAUCCGUCAGCUAACCUCGUAAGCGUUGAAAGGGGAGAC ...................................(..(...............................).(...................))...................................... >AL009126.3/3188193-3188341 UCUCUUUUACCGCUUAAUCAAACACGAACGGGGGAACCAACGAUUGGCUGUUUUAUUAACAGCCUUGGGGUGAAUCUUACUAAGUAAGAGGGGGUACUCUGAAUCCCUAAUCCGACAGCUAACCUCGUAGGCGUAUACAGAGAGGAGGU ......................................................................(..(...............)(...............).)........................................ >CP001022.1/2525926-2525774 UCUCAAAGUACGCCGAGUUCAUGAUUGAAGCGGGGGACCCAACCGUCACGACACGUGACACGGGGUGAAUCUUCUCAGACAAGAGAAGUAGGGCAAAAUCCUAGGUAUGCCCGAAUCCGACAGCUAACCUCGCAGGCGUUUUAGGAGGGAACG ..................................................................(..(..................).(....................))........................................ >AE008691.1/890816-890945 UUUGCAAUCUUGCCGAAUCCGAAAGGUACGGAGGAACCGCUUUUUGGGGUUAAUCUGCGGAUUCCCGCAGUAGGGAUGCCUUCUGUCCCGCACCCGACAGCUAACUCCGGAGGCAUUAAAGGAAGGAGAU ................................................(....(................)(.................))....................................... >ACMD01000040.1/12378-12525 UUUUGUAAUACGCUGAGUCCAAAUGUAUGGAGCGGAGGAACCAAUUUGUGCGUCGUCACUAGGGGUGAAUCUUUCAAUGUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG .............(..(.................................)(..............................................................))................................ >CP000924.1/1503502-1503372 UAUGCAAUCUUGCCGAAUCCGAAAGGUACGGAGGAACCGCUUUUUGGGGUUAAUCUGCAGUGAAGCUGCAGUAGGGAUACCUUCUGUCCCGCACCCGACAGCUAACUCCGGAGGCAAUAAAGGAAGGAGAU ................................................(....(.................)(.................))....................................... >ABDA02000001.1/440841-440988 UUUUUGUAAACGCUGAGUCCAAUUAUAUGGAGCGGAGGAACCAAUUUGUGCGUAGGCACUAGGGGUGAAUCUUUCAAGUUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG .........................................(..(................)(....................................................))............................... >CP000612.1/3033561-3033714 UAUUAAAACAGGCCGAAUCUCCGGAAAUUCCGGAGUACGGGGGACAAAAAUUAAUGGGGUGAAUCCGUAACUUUUUCGGAGGUGCAAAAAAGUACGGUAGGGUGCCCUCAACCCGAACCCGUCAGCUAACCUCGAAGGCCAGAGGAGGGUAAAA ...........................................................(...(.................................)(...............))...................................... >CP001348.1/2317685-2317544 AAAUUAAAAAGCUGAAUCCUCGAAAGAGGUACGGAGGAACCAAGAUUUGGGGUUAAUCCAUUCUUUAUUCUUUUAUUGAAUGGUAGGGAGGUCCUAUUGCCCGAGCCCGUCAGCUAACUUCGGAAGCGCUACUAUAGGAGGG .....................................................(..(..........................)(.................))...................................... >CP000850.1/4190713-4190844 GCGUGGCCGCCGCCUAAUCGCCUGCCAGGGCGAGCCGGGGAACCAGGUACCUGGGGUGCAUCCGCGUCAGCGGUAGGGAUCUUCCGUCCCGAACCCGUCAGCUAACCCGACCGGCGGUUGACGGAAGGACAU ......................................(...(..........)(............))............................................................... >CP000850.1/1933321-1933455 CGUGCCGACCCGCUCAAUCGCCGUAAGGCGAACCGGGGACCCGUUCCACCUGGGGUGAAUCCGCGAGCUUCGCGGUAGGGCGUACUUCCCGUCCGAAUCCGUCAGCUAACCCGGUCGGCGGUAUCGGAAGGAGUC ..............(..(.......................................)(.................))......................................................... >CP000923.1/2119184-2119053 AAAUGCUAAACGCUGAAUUCGUAAAGAAGCGGGGGAACCACUUUGGGGGUGAAUCCAUCUUUUGAUAAGAUGGUAGGGUUAUCUUUCGACCCGAACCCGUCAGCUAACCUCGUAAGCGUUGAAAGAGGAGGA ..................................................(..(...................)(.................))...................................... >AP008230.1/4597555-4597682 ACUUAAUAUGGGCUUAAUUUCCCAAGGGGAAAACGGGGGAACCAAUUUAGGGGUGAAUCGUUUUAAACGUAGAGCAUGUUUCAGCUCGAACCCGUCAGCUAACCUCGUAAGCAUUGAAGCACAUGAGG .....................................................(..(............)(................))....................................... >CP000903.1/3134671-3134815 UACAACCUUUUGCUGAGUCCAAAUUUUGGAGCGGGGGAACCAAUUAUGUAGCUUUUUGCUACUUGGGGCGAAUCUUUUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG ........................................(..(.....................)(...........................).)................................................ >CP001186.1/738417-738564 UUUUUGUAAACGCUGAGUCCAAUUAUAUGGAGCGGAGGAACCAAUUUGUGCGUCUGCACUAGGGGUGAAUCUUUCAAAUUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG ..................(.......(..................................).(.........................................))......................................... >CP001176.1/769318-769465 UUUUUGUAAACGCUGAGUCCAAUUAUAUGGAGCGGAGGAACCAAUUUGUGCAGUGUCACUAGGGGUGAAUCUUUCAAGUUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG ..................................................................(..(........)(....................)).............................................. >BA000030.3/2009780-2009620 CCCGCACACUCACCCGUGCCCGGCAGGAGCGGGGGACCCACAGGCAACAACGCCUGUUCCGGUCUCCGGAACAGGCUAGGGGUCAAGUCGCGCGCAAGCGCGGCCGGGCAUCUCCAGCUCGCACCCGACAGCUCACCUCGCAGGCAUCGGAGAGGAAUGCA ..............................................(...(.........................).(................................))................................................
2		(.RA.()()) (.YU.)			63	61.8
>AP008230.1/1719300-1719165 UUAUAAUAAACGCCUAAUCUGGGGUAUCCUAGAGCGGGGGACUAAAUUUCUGGGGUGAAUCGCACCUCCUGUGCGUAGGGCUUACACUUUCGCCCGAAUCCGUCAACUAACCCCGUAGGCUAAGAAAGGUGUCUGA ..............(..(..............)(..............................(.....)............................................))................... >AAWL01000006.1/97044-96924 AGCUAUAUAAAGCCUAAUCCAGCUCAGGAGCGGGGGAACCAUUACUGGGGUGAAACUCUUUAGGAGUGGGGUGCCUUCAACCCUAACCCGUCAGCUAACCUCGUCGGCUUAGAGAGGAGAA ...................................................(..(...........)(.....(..)......)).................................... >CP000667.1/3890461-3890591 GCGGGGCCACCGCCUAAUCACCUGCCAGGGUGAGCCGGGGAACCAGGUACCUGGGGUGCAUCCGCGUCAGCGGUAGGGAUCUUCCGUCCCGAACCCGUCAGCUAACCCGGUCGGUGGUUGACGGAAGGACA ......................................(..(............)(......................(...)...))........................................... >AP008230.1/5140258-5140118 AAUUAAGUGAAGCUGAAUCUGAGGUACAAAGCCUCAGAACGGGGGAAACGUCACGUGGGGUGAAUCGCAGGAUAUUGCGUAGGGCAUACACCUUUUGCCCGAAUCCGUCAACUAACCUCGUAAGCAGGAAAGGUGGUCAAA ............................................(..(.......)(...............(.....)..............).)............................................. >AE001437.1/3232090-3232211 UAUCAUUAGCCUAAAUUUUAAAAACGGGGAAACCAAUUUUUGGGGUGAAUCGCAUAAUAUAUGCGUAGGUUUGUGCCUUUACCGAAUCCGUCAGCUAACCUCGUAGAAUAAAAGGAGGAAGA ..............................................(..(...............)(..(....)..).).......................................... >AE008691.1/1020677-1020802 AGUUAAAACAUGCCGAAUCCCCGAUAAGGGGUACGGGGGAUGUAAAUUUGGGGUGAAUCCACGUAUUGUGGUAGGGUGGCCCUCACCCGAACCCGUCAACUAACCUCGGAGGCAAAGGGGGUAAAU ..........................................(..(...................)(..........(.....)..........)).............................. >AAOX01000003.1/202757-202896 UGACCUGAUCCGCUGAAUCCAUACAGAACGGAGGACCCAACUGAUUAUUCCAGAAUAAUUAUGGGGUGAAGCCGAAAGGCCGGGGGACUUCUGCCUUCCGAACCCGUCAGCUAACUUCGUAAGCGUUGCAGGAGAGAGGA ...................................(....(.....................)(.......................(....)...........)).................................. >AAJM01000133.1/9684-9540 AACCUUAAAUCGCUGAGUUCCAGAAAUGGAGCGGGGGAACCAAUUUUGUGCAUCGUCACUUGGGUGAAUCUUUCAGUUUUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUUAGAGAGGAGGU .................................................................(..(................)(........(..)......))...................................... >AAXV01000025.1/10441-10579 AUUUAAUAAUGGCCAAAUCUCAAACAUUGAGAACGGAGGACCCAAUAUAUUGGGGUUAAUUCUGAAAUACAGAAAGGAUGAGAAACUCUUUCGCCAUCCUACCCGUCAGCUAACUUCGUCGGCUAAAGCGAAGGAGGUC ........................................................(..(.............).(........(...).........))....................................... >AAWL01000002.1/117860-117729 AUACUAAACGUGCCGAAGUUCCUUCAAAGGAACACGGAGGAACCAUUACUGGGGUGAAUCCGCACAUGCGGUAGGGAUUUCCCUUAUCCCGAACCCGUCAGCUAACUUCGUAGGCAGAGAAAGGGAGUGGUU ......................................................(..(.............)(......(....).....))........................................ >AAWL01000001.1/57092-56953 AACAAAGCAAAGCCGAAUUCCGUAUGGAAGCGGAGGACCCACCUUUUUGGGGUGAAUUCUGCCACAAGCAGAAAGGAUGUUUACCUCUCUUGCCAUCCUAACCCGACAGCUAACUUCGUAGGCUAAAGCAAAGAGGUCGA .....................................................(..(...............).(.........(...)........))......................................... >AAXV01000026.1/33590-33441 AUUUCUAAAUCGCUGAAGCAAACUAGACGCGGGGGACCCAUUUUAGACGGAGUGCAUAAGCAAUCCUUGGGGUGAAUCUCUUCUUUUGAAGGGUAGGGCUACUCAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUAAGAGCAGAUAA ...................(..(......................).(...........................(....).............................)..).................................... >AE015927.1/2209149-2209011 AUACGUACUAUGCUGAAUCCUAUUUAAAAAAAUAGGUACGGAGGAACCAAGAAAUAGGGGUUAAUCUUUAAAUGUUUAAAGAAGGGAAAACCUUGACCUAACCCGUCAGCUAACUUCGGAAGCAAGAAAGGUGGAAAAA .............................................................(..(................)(.....(....)....))....................................... >CP000382.1/667370-667242 AUCUGAACAAUGCCGAAUCUCCAUUUGGAGUACGGGGGAUAUAUUUUGGGGUGAAACUUAUUUUUAUAUAAGUAGGGUUCCUCAAUCCUAACCCGUCAACUAACCUCGGAGGCAAAACGAGGAGGAAAU ...................................................(...(................)(.....(..).....))....................................... >AL939120.1/174742-174619 CCAGGUAAGUCGCCGCACCGGUCACCACCGGAGCGGCUCGGGGUGAAGCCGUACCCGUCAGGGCACGGCCGGGCACCUCCCCGCCCGAACCCGACAGCUCACCUCGCAGGCGUAAGGAGAGGGA ...........................................(...(....................)(.....(...)......)).................................... >CP000850.1/1933321-1933455 CGUGCCGACCCGCUCAAUCGCCGUAAGGCGAACCGGGGACCCGUUCCACCUGGGGUGAAUCCGCGAGCUUCGCGGUAGGGCGUACUUCCCGUCCGAAUCCGUCAGCUAACCCGGUCGGCGGUAUCGGAAGGAGUC ..............(..(.......................................)(......(...)......))......................................................... >AL009126.3/3188193-3188341 UCUCUUUUACCGCUUAAUCAAACACGAACGGGGGAACCAACGAUUGGCUGUUUUAUUAACAGCCUUGGGGUGAAUCUUACUAAGUAAGAGGGGGUACUCUGAAUCCCUAAUCCGACAGCUAACCUCGUAGGCGUAUACAGAGAGGAGGU ......................................................................(..(...............)(.....(...).....).)........................................ >AE017333.1/525158-525301 AAUCCAAAAUCGCUUAAUCUAAAAAAGAGCGGGGGAACCAUUUAGAGGCGUACAGCCUCCGGGGUGAAUCCUUUUAAAGGUAGGGCAAACUCUCGUGAGCCCGAAUCCGUCAGCUAACCUCGUAAGCGUUAAGAGAGAGGGAGA .................................(....(........................................)(.........(..).........))....................................... >BA000030.3/5911883-5911718 AUCAAUCCACCACUCACUCACGCACGGCAGGAGCGGGGAAACCAGGUAAGUCGCCGUCCGGUCACCACGCCGGAGCGGCUCGGGGUGAAGCCGCGUCCUCGGACGCGGCCGGGCAUCUCCAGCCCGAACCCGACAGCUCACCUCGCAGGCGCCGGAGAGGAAAUUC .....................................................................................(...(..................)(.....(...).....))....................................... >AE001437.1/1374236-1374371 UCCUUAAGAGUGCCGAAUCUUAAUAAUAUUUAAGUACGGGGGAACACAUUGUGGGUGAAUCUUACGACUAUUCGUAAGUAGGGUGCCUUCAACCCGAAUCCGUAAGCUAACCUCGGAGGCAAAAUUGAUAAAGGAA .......................................................(....(................)(......(..).......))...................................... >BA000043.1/224415-224554 GAAUAUUUAGCGCUGAAUCCGUCAUGGAGCGGGGGACCCACUUGUUGCAACGCUCGUUGCUAGGGGUGAAUCCGAAAGGACGGGCAUCUCUCCAAGCCCGAACCCGACAGCUAACCUCGCAAGCGCUUUGGGGAGGGACG .............(..(....)..(.........................(....).....................................))............................................. >CP000232.1/2197504-2197633 UAUUUUUUAGCACCGAAUUCCCGGGUAGGCGGGAAACGGGGGAUAUUUUUGGGGUGAAGAGCCAAAGGCUCCGGGCUAACUCUCGGUCCGAACCCGUCAACUAACCUCGUAGGUGUGCGAGAGUGGAGGU ......................................................(..(.............)(.....(..)......).)....................................... >AE008691.1/1853404-1853270 UAAUCGUUAUCGCUGAACCCGAAAAGGGGCGGGGGACCCACACUUUUGGGGCGAAUCUCUUCCUACGGGAAGAGUAGGGUUACUCCUUCGACCCGAGCCCGUCAGCUAACCUCGCAAGCGUGGGAAGGAGAAAUA ....................................................(..(..................)(........(..)......))....................................... >CP000612.1/2967251-2967121 UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU .....................................................(..(.............)(.......(..)......))........................................ >AP006840.1/606473-606333 CGUCCACAAACGCUGAAUUCCCACCAGGAAACGGGGGACCCAGAAUCCACCAGGGGCCAAGCGCAGUGGCUUCACUGCCCGGGCGACACUCCUGCCGUCCGCGCCCGUCAGCUAACCCCGUAAGCGUCGCAGGGGGAGACC .........................................................(..(.................)(.......(....).......))....................................... >AE008691.1/927258-927390 ACAUGCUAAACGCUGAAUUCGUUAAGAAGCGGGGGACCCACUCUUUUGGGGUGAAUCCAUCUUUUAAAAGAUGGUAGGGUUAUCUUUCGACCCGAACCCGUCAGCUAACCCCGUAAGCGUUGAAAGAGAAGGA ......................(..(...................)(...............(....).........................))...................................... >BA000004.3/632283-632434 CACCUUUAAUCGCUGAAUCUCUAUUGAGAGCGGGGGAACCAUACCUGACAGAGUUGUUUCUGUCUUGGGGUGAAUCUUAUGUUUUUUAUAAGAAGGGAUACUCUCCAUCCCUAAUCCGACAGCUAACCUCGUAAGCGUUGAUUCGAGAGAGG .......................................................................(..(.................).(.(.....).)).............................................. >CP000728.1/3775383-3775509 UACUAUUAUUAGCCUAAGUUUUUUAAAACACGGGGAAACCAAAUUUUGGGGUGAAUCGUAAAAUUACGUAGGUUAUACCUUUUCCGAACCCGUCAGCUAACCCCGUAGGCAAAAGGAGUGAGAAAAU ..............(..(..........)(...........(...)......................))......................................................... >AAOX01000019.1/14342-14479 UCGAAAGAUGCGCUUAAUCUUUUAAAGAGCGGGGGAUCCAACCGGCAUACACAUGCCUCGGGGUGAAUCCUUUACAGGUAGGGCACUCUCAAAGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUAUUGAGAGGACAA ....................................(......(............)(........................(......)........))...................................... >AP008230.1/4597555-4597682 ACUUAAUAUGGGCUUAAUUUCCCAAGGGGAAAACGGGGGAACCAAUUUAGGGGUGAAUCGUUUUAAACGUAGAGCAUGUUUCAGCUCGAACCCGUCAGCUAACCUCGUAAGCAUUGAAGCACAUGAGG .....................................................(..(............)(.......(..).....))....................................... >AE015927.1/2711017-2711139 AAUAACAUAAGCCUAAGUUUAAAACGCGGGGGAACCAUUAAUUGGGGUGAAUCACAUUUAUUUUGUGUAGGUUAGCCUUUACCGAACCCGUCAGCUAACCCCGUUGGUAAAAGGAGUGAAUAA .............(..(.......)(............................................(....)..............).).............................. >CP000764.1/711905-712051 GUUUUUGUAACGCUGAGUCCAAUGAUUUGGAGCGGAGGAACCAAAUGGUGCAUGGUCACUAGGGGUGAAUCUUUCAUGAUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUUUUGAGAGAGGGUGG ....................................(..(........)(.................(....)................))........................................................ >BX927150.1/172169-172001 CAUUCAUGUGGGCCAUAUUGCAGACAGGGACGGGGAAACCACCCACCAUCUUUUCACAAAAGAAGGCAUGGAGGCCAACUCCUUGGGGUGAAGCCAGACAUCCACUGGCAGAGCAACUCCUCCGCUCUAACCCGACAGCUAACCUCGACGGCGACAAAUGAGAGGAAAA .........................................................................................(..(...............)(......(....).....))........................................ >CP001022.1/2525926-2525774 UCUCAAAGUACGCCGAGUUCAUGAUUGAAGCGGGGGACCCAACCGUCACGACACGUGACACGGGGUGAAUCUUCUCAGACAAGAGAAGUAGGGCAAAAUCCUAGGUAUGCCCGAAUCCGACAGCUAACCUCGCAGGCGUUUUAGGAGGGAACG ..................................................................(..(..................).(........(..)........))........................................ >BA000028.3/1706087-1706245 CCUUUUUAGUCGCUGAAACUGUUGCUUUAGUAUUGUGCAGUGCGGGGGACCCAUUUUUGGCAAUAAAACAUUUGUCUUGGGGUGAAUCUAAAUAUUUAGAAGGGAUACUUUAUGUCCCUAAUCCGACAGCUAACCUCGUAAGCGUCAUAGGGAGAAAAG ...................................................................................(..(............)(.......(..)......))....................................... >AAOX01000002.1/156408-156546 AAAAUGAAUCGGCUUAAUCUCAUAUUGAGAGCGGAGGAACCAAUUUUUGGGGCUAAUCCUGCAGGAAGCAGGAGGGAUGAGAAUGAUCUUUCGCCAUCCUGCCCGUCAGCUAACUUCGUCGGCUAAAGCGAGUGAGGUC ..............(..(...........)(...........(....).............................................))............................................ >CP000232.1/459162-459290 AAUAAGCGAGCGCUGAAUCCCUGAAUAGGGAACGGGGGAACCACUUCUUGGGGUGAAUCCUUUUUCAGGUAGGGUUAACUUUCGACCCGAACCCGGCAGCUAACUUCGUAAGCGUAGAAAGGUGAGGUG ............(...(..............)(.............................(...)...........................))................................. >CP000721.1/1710119-1709985 AUAUAUGUAACGCUUAAUCACUUUGAACGGGAGAACCAUUUUUUGGGGUGAAUCUUAUUACACGAUAAUAAGUAGGGUUAAUUUUCUUCAAUCCGAAUCCGUCAGCUAAUCUCGUAAGCGUAGAAGAGAAGUUUU .............................(..(.......)(.................................(....)...............).).................................... >AE008691.1/890816-890945 UUUGCAAUCUUGCCGAAUCCGAAAGGUACGGAGGAACCGCUUUUUGGGGUUAAUCUGCGGAUUCCCGCAGUAGGGAUGCCUUCUGUCCCGCACCCGACAGCUAACUCCGGAGGCAUUAAAGGAAGGAGAU ..............(..(........)(...............................(....)............................................))................... >CP000721.1/3440152-3440282 AUAAUUAUAACGCUGAAUCUUUUUGAACGGGAGAACCAUUUUUUGGGGUGAAUCUUAUUUUAGGAUAAGUAGGGUUAUUUUCUUCAAUCCGAAUCCGUCAGCUAAUCUCGUAAGCGUUGAAGAGAAGUUUU ..............(..(.......)(...............................(....).................................))................................ >CP000764.1/713115-713260 AACCUUAUAUCGCUGAGUCCAAUGAUUUGGAGCGGGGGAACCAAUUUUGUGCAUUGUCACUUGGGGUGAAUCUUUCAUGAUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACUUCGUAAGCGUUUGGAGAGGAGGU ...................................................................(..(...............)(........(..)......))...................................... >AE017225.1/3137586-3137727 UAAAACCUUUUGCUGAGUCCAAAUUUUGGAGCGGGGGAACCACUUUUGUAGCUAUGCUACUUGGGGCGAAUCUUUUUUAAGUAGGGAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG ....................................(.....(.....................)(.........(....).............)).............................................. >CP000924.1/1503502-1503372 UAUGCAAUCUUGCCGAAUCCGAAAGGUACGGAGGAACCGCUUUUUGGGGUUAAUCUGCAGUGAAGCUGCAGUAGGGAUACCUUCUGUCCCGCACCCGACAGCUAACUCCGGAGGCAAUAAAGGAAGGAGAU ................................................(....(.................)(.......(..)......))....................................... >CP000612.1/3033561-3033714 UAUUAAAACAGGCCGAAUCUCCGGAAAUUCCGGAGUACGGGGGACAAAAAUUAAUGGGGUGAAUCCGUAACUUUUUCGGAGGUGCAAAAAAGUACGGUAGGGUGCCCUCAACCCGAACCCGUCAGCUAACCUCGAAGGCCAGAGGAGGGUAAAA ...........................................................(...(.................................)(.....(...).....))...................................... >CP000853.1/56237-56106 AUAUACAUAGCGCUGAAUUCUUUUAAGAAGCGGGGGAACCAUUAUUUUGGGGUGAAUCUCAUAUCUAUGAGACGGGUCAACUCUUUCGAUCCGAAUCCGUCAGCUAACCUCGUAAGCGUUGAAAGGGGAGAC ..............(..(..........)(..............................(......)............................................)).................. >BA000043.1/3286126-3285968 CCCUAAAGAUCGCUGAAUCCGAAUAGGAGCGGGGGAACCAACCGUGGCUUUGUGCGCCACAUGGGGUGAAUCCUGUUCAGGACGCCUGUUCUGAACGGGUAGGGUGACUCUCAUCACCCGAAUCCGUCAGCUAACCUCGUAAGCGUGUUGAGAGAAGGG ......................................(..(....................)(..................(....)..............................))....................................... >CP001336.1/3262209-3262073 AAGAAAUGUGGGCUGAAUCCGGACCGUGUGUCUGGAACGGGGGAUAAUCUUUUGGGGUGAAUCGCAGUCAUGCGUAGGGCUUGCACCUUUUUGCCCGAAUCCGUCAACUAACCUCGUAAGCGACGAAAGGUGGAAAA ..............(..(.................)(............(....)..................................)).............................................. >ABDA02000001.1/440841-440988 UUUUUGUAAACGCUGAGUCCAAUUAUAUGGAGCGGAGGAACCAAUUUGUGCGUAGGCACUAGGGGUGAAUCUUUCAAGUUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG .........................................(..(................)(........(....)......................................))............................... >CP000764.1/2226760-2226900 UAAAACCUUUUGCUGAAUCCACUAUGUGGAGCGGGGGACCCAUUUUUGUAGCAUUUGCUACUUGGGGCGAAUCUUUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGGA ..............(..(...........)...(........................(......)..........................................))............................... >CP000923.1/2119184-2119053 AAAUGCUAAACGCUGAAUUCGUAAAGAAGCGGGGGAACCACUUUGGGGGUGAAUCCAUCUUUUGAUAAGAUGGUAGGGUUAUCUUUCGACCCGAACCCGUCAGCUAACCUCGUAAGCGUUGAAAGAGGAGGA ..................................................(..(...................)(........(..).....))...................................... >CP000002.3/542499-542640 UAGCGCCACACGUUUAAUCCUUUAGUAGGAGUGGGGGACCCGAUCAUUUGGGGUGAAUUUUUCUGUUCCCGUGCGAACCGAAAGACGGACAUCUCUUCGUCCGAACCCGUCAGCUAACCUCAUCAACGUGAAGAGAGUCAUG ......................................................(..(..........................)(.....(...)......))...................................... >AL939125.1/103160-103305 AGUCCCCGUACGGCGCGAGCCAGGGGAGCCGGGGACCCAUCGCAGUCCCUGGGGUGAAUCGGACGCCCGCGCGCACCGCGAGGGGGUCCGUAGGAGACCUUCCACCUCCGAACCCGUCAGCUAACCCGGUAGGCGAGAGGGAAGGA ..............(...(.................................)(..........................................(....)..))........................................ >CP001176.1/769318-769465 UUUUUGUAAACGCUGAGUCCAAUUAUAUGGAGCGGAGGAACCAAUUUGUGCAGUGUCACUAGGGGUGAAUCUUUCAAGUUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG .............(...(............)(...........................................(....).............................................).)................... >CP000850.1/4190713-4190844 GCGUGGCCGCCGCCUAAUCGCCUGCCAGGGCGAGCCGGGGAACCAGGUACCUGGGGUGCAUCCGCGUCAGCGGUAGGGAUCUUCCGUCCCGAACCCGUCAGCUAACCCGACCGGCGGUUGACGGAAGGACAU ..............(..(..............)(...........................................(....)........))....................................... >AAFX01048773.1/685-551 ACAACUAAAACGCUCAAUUCCCGAGAAGGGGAGCGGGGGACCCAAUCCGUUGGGGCGAAUGGUCCGCUUGGACCUAGGGCAAGCUCUUCAUGCCCGAGCCCGACAGCUAACCCCGUAAGCGUGGCGAGAAGAGCU ..............(..(.............)(.......................................(...)......................................)).................. >CP000673.1/279064-278931 CAAUAUCAUUAGCCUAAGUUUUAUAAAAAACACGGGGAAACCAGUACUAUUUUGGGGUGAAUCGUAAUUUAUUACGUAGGUUAUGCCUUUUCCGAACCCGUCAGCUAACCCCGUCGGUAAUAAGGAGGAUAUAU ..............(..(............)(.............(...)..........................))........................................................ >CP000726.1/1414382-1414259 AAACAAAUCAUGCCGAAUCUUCUUUAUGAAGUACCGGGGAUACUCUUGGGGUGAAUCUCUUAGGAAUAGGGUACCUCUAACCCGAACCCGUCAACUAACCUGGGAGGCAAUAUGGAGGGAUUUA ...................................................(..(..........)(......(..).))............................................ >AE017194.1/3159877-3160019 UAAAACCUUUUGCUGAGUCCAAAAUUUGGAGCGGGGGAACCAUUUUUGUAGCUUUGCUACUUGGGGCGAAUCUUAUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG .............(..(.............)(.........................(......)..................)).......................................................... >CP001186.1/738417-738564 UUUUUGUAAACGCUGAGUCCAAUUAUAUGGAGCGGAGGAACCAAUUUGUGCGUCUGCACUAGGGGUGAAUCUUUCAAAUUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG .........................................(..(................)(...........................(.....)..................))............................... >CP001348.1/597732-597876 AAUAAUUUAUCGCUGAAUUAUGGCAGUUUGACUGCUAUAAGCGGGGGAACCAUUCAAAUGGGGUGAAUCCUGUGUUAUCAGGUAGGGUUAGUCUCUUACAACCCGAAUCCGGCAGCUAACUUCGUAAGCGUUGGGGAGAAAGUGA .............(..(.......................)(..............................(........)......................))....................................... >CP000903.1/3134671-3134815 UACAACCUUUUGCUGAGUCCAAAUUUUGGAGCGGGGGAACCAAUUAUGUAGCUUUUUGCUACUUGGGGCGAAUCUUUUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG .......................................(.....(.................)(............(.....)............))............................................... >CP000141.1/2221513-2221384 AUUAACCAAACGCUGAAUUCCCGUUACGGGAAGCGGGGGAACCACUUUUUGGGGUGAAUCCUUUUCAGGUAGGGCGACUCCUUCCGCCCGAACCCGUCAGCUAACCUCGUAAGCGUCGAAGGGGGAGCAA ..............(..(.............)(............................(....).............................))................................ >AAOX01000003.1/202929-203071 AGCACUGAAACGCUGAAUCUUAUUGAGCGGGGGAACCAACUUUUGACUGCAUGCUGCAGUCUUGGGGUGAAGCCAUGAAUGGCAGGGAGACUCUUACCUUCCUAAUCCGACAGCUAACUCCGUAAGCGUUGUUUAAGAGAGUG ................................(...(...............................)(..................(........).......))....................................
3		(.RA.()()) (.YU.) (()(G)N)N			44	43.1
>CP000721.1/3440152-3440282 AUAAUUAUAACGCUGAAUCUUUUUGAACGGGAGAACCAUUUUUUGGGGUGAAUCUUAUUUUAGGAUAAGUAGGGUUAUUUUCUUCAAUCCGAAUCCGUCAGCUAAUCUCGUAAGCGUUGAAGAGAAGUUUU .....((.......(..(.......)(...............................(....).................................))......)(................).)..... >AAOX01000002.1/156408-156546 AAAAUGAAUCGGCUUAAUCUCAUAUUGAGAGCGGAGGAACCAAUUUUUGGGGCUAAUCCUGCAGGAAGCAGGAGGGAUGAGAAUGAUCUUUCGCCAUCCUGCCCGUCAGCUAACUUCGUCGGCUAAAGCGAGUGAGGUC .........((...(..(...........)(...........(....).............................................)).......)(.......................).)......... >CP000923.1/2119184-2119053 AAAUGCUAAACGCUGAAUUCGUAAAGAAGCGGGGGAACCACUUUGGGGGUGAAUCCAUCUUUUGAUAAGAUGGUAGGGUUAUCUUUCGACCCGAACCCGUCAGCUAACCUCGUAAGCGUUGAAAGAGGAGGA .......................(.(........................(..(...................)(........(..).....))..)(....).)........................... >CP000721.1/1710119-1709985 AUAUAUGUAACGCUUAAUCACUUUGAACGGGAGAACCAUUUUUUGGGGUGAAUCUUAUUACACGAUAAUAAGUAGGGUUAAUUUUCUUCAAUCCGAAUCCGUCAGCUAAUCUCGUAAGCGUAGAAGAGAAGUUUU ......................((.....(..(.......)(.................................(....)...............).).....)(.......).)................... >CP000232.1/2197504-2197633 UAUUUUUUAGCACCGAAUUCCCGGGUAGGCGGGAAACGGGGGAUAUUUUUGGGGUGAAGAGCCAAAGGCUCCGGGCUAACUCUCGGUCCGAACCCGUCAACUAACCUCGUAGGUGUGCGAGAGUGGAGGU ......(..(............................................(..(.............)(.....(..)......).)........................).(....).)..... >AE001437.1/3232090-3232211 UAUCAUUAGCCUAAAUUUUAAAAACGGGGAAACCAAUUUUUGGGGUGAAUCGCAUAAUAUAUGCGUAGGUUUGUGCCUUUACCGAAUCCGUCAGCUAACCUCGUAGAAUAAAAGGAGGAAGA ....((........................................(..(...............)(..(....)..).).................)(...............).)..... >CP001336.1/3262209-3262073 AAGAAAUGUGGGCUGAAUCCGGACCGUGUGUCUGGAACGGGGGAUAAUCUUUUGGGGUGAAUCGCAGUCAUGCGUAGGGCUUGCACCUUUUUGCCCGAAUCCGUCAACUAACCUCGUAAGCGACGAAAGGUGGAAAA .((...........(..(.................)(............(....)..................................))..........)..(..........................).)... >AP008230.1/1719300-1719165 UUAUAAUAAACGCCUAAUCUGGGGUAUCCUAGAGCGGGGGACUAAAUUUCUGGGGUGAAUCGCACCUCCUGUGCGUAGGGCUUACACUUUCGCCCGAAUCCGUCAACUAACCCCGUAGGCUAAGAAAGGUGUCUGA .....((.......(..(..............)(..............................(.....)............................................))....)(.....).)..... >AE008691.1/927258-927390 ACAUGCUAAACGCUGAAUUCGUUAAGAAGCGGGGGACCCACUCUUUUGGGGUGAAUCCAUCUUUUAAAAGAUGGUAGGGUUAUCUUUCGACCCGAACCCGUCAGCUAACCCCGUAAGCGUUGAAAGAGAAGGA ........((............(..(...................)(...............(....).........................))..........)(..............).)......... >AP008230.1/5140258-5140118 AAUUAAGUGAAGCUGAAUCUGAGGUACAAAGCCUCAGAACGGGGGAAACGUCACGUGGGGUGAAUCGCAGGAUAUUGCGUAGGGCAUACACCUUUUGCCCGAAUCCGUCAACUAACCUCGUAAGCAGGAAAGGUGGUCAAA .........(.(................................(..(.......)(...............(.....)..............).)...........)(.........................).).... >CP000726.1/1414382-1414259 AAACAAAUCAUGCCGAAUCUUCUUUAUGAAGUACCGGGGAUACUCUUGGGGUGAAUCUCUUAGGAAUAGGGUACCUCUAACCCGAACCCGUCAACUAACCUGGGAGGCAAUAUGGAGGGAUUUA ..................((...............................(..(..........)(......(..).))............)(............).)............... >AE015927.1/2209149-2209011 AUACGUACUAUGCUGAAUCCUAUUUAAAAAAAUAGGUACGGAGGAACCAAGAAAUAGGGGUUAAUCUUUAAAUGUUUAAAGAAGGGAAAACCUUGACCUAACCCGUCAGCUAACUUCGGAAGCAAGAAAGGUGGAAAAA .........((..................................................(..(................)(....(.....)....))............)(...........).)........... >AE017225.1/3137586-3137727 UAAAACCUUUUGCUGAGUCCAAAUUUUGGAGCGGGGGAACCACUUUUGUAGCUAUGCUACUUGGGGCGAAUCUUUUUUAAGUAGGGAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG ........((..........................(.....(.....................)(.........(....).............)).................).(....................).)... >AAWL01000001.1/57092-56953 AACAAAGCAAAGCCGAAUUCCGUAUGGAAGCGGAGGACCCACCUUUUUGGGGUGAAUUCUGCCACAAGCAGAAAGGAUGUUUACCUCUCUUGCCAUCCUAACCCGACAGCUAACUUCGUAGGCUAAAGCAAAGAGGUCGA ...((................................................(..(...............)(.........(....).........))...........).(.....................).).. >CP000853.1/56237-56106 AUAUACAUAGCGCUGAAUUCUUUUAAGAAGCGGGGGAACCAUUAUUUUGGGGUGAAUCUCAUAUCUAUGAGACGGGUCAACUCUUUCGAUCCGAAUCCGUCAGCUAACCUCGUAAGCGUUGAAAGGGGAGAC .....((.......(..(..........)(..............................(......)............................................))....)(....).)..... >AL939120.1/174742-174619 CCAGGUAAGUCGCCGCACCGGUCACCACCGGAGCGGCUCGGGGUGAAGCCGUACCCGUCAGGGCACGGCCGGGCACCUCCCCGCCCGAACCCGACAGCUCACCUCGCAGGCGUAAGGAGAGGGA ..((.......................................(...(....................)(.....(...)......))..............).(.............).)... >AAWL01000002.1/117860-117729 AUACUAAACGUGCCGAAGUUCCUUCAAAGGAACACGGAGGAACCAUUACUGGGGUGAAUCCGCACAUGCGGUAGGGAUUUCCCUUAUCCCGAACCCGUCAGCUAACUUCGUAGGCAGAGAAAGGGAGUGGUU .........((...........................................(..(.............)(......(....).....)).......................)(......).)...... >CP000764.1/711905-712051 GUUUUUGUAACGCUGAGUCCAAUGAUUUGGAGCGGAGGAACCAAAUGGUGCAUGGUCACUAGGGGUGAAUCUUUCAUGAUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUUUUGAGAGAGGGUGG .............((.....................(..(........)(..................(...)................))..................)(.............).).................... >AAOX01000003.1/202757-202896 UGACCUGAUCCGCUGAAUCCAUACAGAACGGAGGACCCAACUGAUUAUUCCAGAAUAAUUAUGGGGUGAAGCCGAAAGGCCGGGGGACUUCUGCCUUCCGAACCCGUCAGCUAACUUCGUAAGCGUUGCAGGAGAGAGGA ......((...........................(....(.....................)(.......................(....)...........))................)(.........).).... >CP001022.1/2525926-2525774 UCUCAAAGUACGCCGAGUUCAUGAUUGAAGCGGGGGACCCAACCGUCACGACACGUGACACGGGGUGAAUCUUCUCAGACAAGAGAAGUAGGGCAAAAUCCUAGGUAUGCCCGAAUCCGACAGCUAACCUCGCAGGCGUUUUAGGAGGGAACG ....((............................................................(..(...................)(.......(....).......)).........)(...................).)....... >AE001437.1/1374236-1374371 UCCUUAAGAGUGCCGAAUCUUAAUAAUAUUUAAGUACGGGGGAACACAUUGUGGGUGAAUCUUACGACUAUUCGUAAGUAGGGUGCCUUCAACCCGAAUCCGUAAGCUAACCUCGGAGGCAAAAUUGAUAAAGGAA .............((.........................................(..(..................)(....(.....)....))............)(....).).................. >CP000612.1/2967251-2967121 UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU .......................((............................(..(.............)(.......(..)......)).......)(............).)................ >CP000924.1/1503502-1503372 UAUGCAAUCUUGCCGAAUCCGAAAGGUACGGAGGAACCGCUUUUUGGGGUUAAUCUGCAGUGAAGCUGCAGUAGGGAUACCUUCUGUCCCGCACCCGACAGCUAACUCCGGAGGCAAUAAAGGAAGGAGAU .........((.....................................(....(.................)(.......(..)......)).......................)(........).)... >CP000764.1/713115-713260 AACCUUAUAUCGCUGAGUCCAAUGAUUUGGAGCGGGGGAACCAAUUUUGUGCAUUGUCACUUGGGGUGAAUCUUUCAUGAUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACUUCGUAAGCGUUUGGAGAGGAGGU ...............((..................................................(..(...............)(..(...)...........))......)(...............).)............ >AAFX01048773.1/685-551 ACAACUAAAACGCUCAAUUCCCGAGAAGGGGAGCGGGGGACCCAAUCCGUUGGGGCGAAUGGUCCGCUUGGACCUAGGGCAAGCUCUUCAUGCCCGAGCCCGACAGCUAACCCCGUAAGCGUGGCGAGAAGAGCU .......(.(....(..(.............)(...............................(....).............................................))....)(....).)..... >CP000903.1/3134671-3134815 UACAACCUUUUGCUGAGUCCAAAUUUUGGAGCGGGGGAACCAAUUAUGUAGCUUUUUGCUACUUGGGGCGAAUCUUUUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG ...............((......................(.....(.................)(............(.....)............)).............)(...............).).............. >CP000850.1/1933321-1933455 CGUGCCGACCCGCUCAAUCGCCGUAAGGCGAACCGGGGACCCGUUCCACCUGGGGUGAAUCCGCGAGCUUCGCGGUAGGGCGUACUUCCCGUCCGAAUCCGUCAGCUAACCCGGUCGGCGGUAUCGGAAGGAGUC ....(.(.......(..(............)(.................................(...)............................................))......)(......).).. >AE008691.1/890816-890945 UUUGCAAUCUUGCCGAAUCCGAAAGGUACGGAGGAACCGCUUUUUGGGGUUAAUCUGCGGAUUCCCGCAGUAGGGAUGCCUUCUGUCCCGCACCCGACAGCUAACUCCGGAGGCAUUAAAGGAAGGAGAU .......(.(....(..(........)(...............................(....)............................................))...)(....).)....... >AE008691.1/1853404-1853270 UAAUCGUUAUCGCUGAACCCGAAAAGGGGCGGGGGACCCACACUUUUGGGGCGAAUCUCUUCCUACGGGAAGAGUAGGGUUACUCCUUCGACCCGAGCCCGUCAGCUAACCUCGCAAGCGUGGGAAGGAGAAAUA ........((..........................................(..(..................)(......(....)......))...........)(..............).)......... >CP001186.1/738417-738564 UUUUUGUAAACGCUGAGUCCAAUUAUAUGGAGCGGAGGAACCAAUUUGUGCGUCUGCACUAGGGGUGAAUCUUUCAAAUUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG ......(..(...............................(..(................)(.....(...)..........................................))...............)(........).)... >CP000382.1/667370-667242 AUCUGAACAAUGCCGAAUCUCCAUUUGGAGUACGGGGGAUAUAUUUUGGGGUGAAACUUAUUUUUAUAUAAGUAGGGUUCCUCAAUCCUAACCCGUCAACUAACCUCGGAGGCAAAACGAGGAGGAAAU ..........................((.......................(...(................)(.....(..).....))...........)(.......).)................ >BA000043.1/224415-224554 GAAUAUUUAGCGCUGAAUCCGUCAUGGAGCGGGGGACCCACUUGUUGCAACGCUCGUUGCUAGGGGUGAAUCCGAAAGGACGGGCAUCUCUCCAAGCCCGAACCCGACAGCUAACCUCGCAAGCGCUUUGGGGAGGGACG .((..........(..(....)..(..........................(..)......................................))..................)(....................).).. >BA000028.3/1706087-1706245 CCUUUUUAGUCGCUGAAACUGUUGCUUUAGUAUUGUGCAGUGCGGGGGACCCAUUUUUGGCAAUAAAACAUUUGUCUUGGGGUGAAUCUAAAUAUUUAGAAGGGAUACUUUAUGUCCCUAAUCCGACAGCUAACCUCGUAAGCGUCAUAGGGAGAAAAG ..................((...............................................................(..(............)(.......(..)......)).......).(...........).)............... >CP000232.1/459162-459290 AAUAAGCGAGCGCUGAAUCCCUGAAUAGGGAACGGGGGAACCACUUCUUGGGGUGAAUCCUUUUUCAGGUAGGGUUAACUUUCGACCCGAACCCGGCAGCUAACUUCGUAAGCGUAGAAAGGUGAGGUG .......((.....(..(............)(..............(..).............................................)).....)(............).).......... >AE008691.1/1020677-1020802 AGUUAAAACAUGCCGAAUCCCCGAUAAGGGGUACGGGGGAUGUAAAUUUGGGGUGAAUCCACGUAUUGUGGUAGGGUGGCCCUCACCCGAACCCGUCAACUAACCUCGGAGGCAAAGGGGGUAAAU ......(..(................................(..(...................)(..........(.....)..........))......)(.............).)...... >BA000043.1/3286126-3285968 CCCUAAAGAUCGCUGAAUCCGAAUAGGAGCGGGGGAACCAACCGUGGCUUUGUGCGCCACAUGGGGUGAAUCCUGUUCAGGACGCCUGUUCUGAACGGGUAGGGUGACUCUCAUCACCCGAAUCCGUCAGCUAACCUCGUAAGCGUGUUGAGAGAAGGG ..........((..........................(..(....................)(..................(....)..............................))..........)(.................).)....... >CP000141.1/2221513-2221384 AUUAACCAAACGCUGAAUUCCCGUUACGGGAAGCGGGGGAACCACUUUUUGGGGUGAAUCCUUUUCAGGUAGGGCGACUCCUUCCGCCCGAACCCGUCAGCUAACCUCGUAAGCGUCGAAGGGGGAGCAA ......((......(..(.............)(............................(....).............................)).....)(................).)...... >CP000764.1/2226760-2226900 UAAAACCUUUUGCUGAAUCCACUAUGUGGAGCGGGGGACCCAUUUUUGUAGCAUUUGCUACUUGGGGCGAAUCUUUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGGA .....(.(......(..(...........)(.............................(..)............................................))......)(...............).)..... >AAOX01000019.1/14342-14479 UCGAAAGAUGCGCUUAAUCUUUUAAAGAGCGGGGGAUCCAACCGGCAUACACAUGCCUCGGGGUGAAUCCUUUACAGGUAGGGCACUCUCAAAGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUAUUGAGAGGACAA ..(.(...............................(......(............)(........................(....)..........))...........)(....................).).. >AAWL01000006.1/97044-96924 AGCUAUAUAAAGCCUAAUCCAGCUCAGGAGCGGGGGAACCAUUACUGGGGUGAAACUCUUUAGGAGUGGGGUGCCUUCAACCCUAACCCGUCAGCUAACCUCGUCGGCUUAGAGAGGAGAA ...(.(.............................................(..(...........)(.....(..).....).)............).(...............).)... >AL009126.3/3188193-3188341 UCUCUUUUACCGCUUAAUCAAACACGAACGGGGGAACCAACGAUUGGCUGUUUUAUUAACAGCCUUGGGGUGAAUCUUACUAAGUAAGAGGGGGUACUCUGAAUCCCUAAUCCGACAGCUAACCUCGUAGGCGUAUACAGAGAGGAGGU ......(.(..............................................................(..(.............)(......(...)......))............).(...............).)....... >AP006840.1/606473-606333 CGUCCACAAACGCUGAAUUCCCACCAGGAAACGGGGGACCCAGAAUCCACCAGGGGCCAAGCGCAGUGGCUUCACUGCCCGGGCGACACUCCUGCCGUCCGCGCCCGUCAGCUAACCCCGUAAGCGUCGCAGGGGGAGACC ..............(.(........................................(..(.................)(.......(....).......)).....).(...............).)............. >BA000004.3/632283-632434 CACCUUUAAUCGCUGAAUCUCUAUUGAGAGCGGGGGAACCAUACCUGACAGAGUUGUUUCUGUCUUGGGGUGAAUCUUAUGUUUUUUAUAAGAAGGGAUACUCUCCAUCCCUAAUCCGACAGCUAACCUCGUAAGCGUUGAUUCGAGAGAGG .............((........................................................(..(.................).(.(.....).)).........)(......................).).......... >CP001348.1/597732-597876 AAUAAUUUAUCGCUGAAUUAUGGCAGUUUGACUGCUAUAAGCGGGGGAACCAUUCAAAUGGGGUGAAUCCUGUGUUAUCAGGUAGGGUUAGUCUCUUACAACCCGAAUCCGGCAGCUAACUUCGUAAGCGUUGGGGAGAAAGUGA ..........((.(..(.......................)(...............................(....).........................))......)..(.................).).........

>BA000043.1/224415-224554 GAAUAUUUAGCGCUGAAUCCGUCAUGGAGCGGGGGACCCACUUGUUGCAACGCUCGUUGCUAGGGGUGAAUCCGAAAGGACGGGCAUCUCUCCAAGCCCGAACCCGACAGCUAACCUCGCAAGCGCUUUGGGGAGGGACG .............(..(....)..(....................................................................))............................................. .............(..(....)..(.........................(....).....................................))............................................. .((..........(..(....)..(..........................(..)......................................))..................)(....................).).. >AL939120.1/174742-174619 CCAGGUAAGUCGCCGCACCGGUCACCACCGGAGCGGCUCGGGGUGAAGCCGUACCCGUCAGGGCACGGCCGGGCACCUCCCCGCCCGAACCCGACAGCUCACCUCGCAGGCGUAAGGAGAGGGA ...........................................(...(....................)(................)).................................... ...........................................(...(....................)(.....(...)......)).................................... ..((.......................................(...(....................)(.....(...)......))..............).(.............).)... >CP000764.1/713115-713260 AACCUUAUAUCGCUGAGUCCAAUGAUUUGGAGCGGGGGAACCAAUUUUGUGCAUUGUCACUUGGGGUGAAUCUUUCAUGAUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACUUCGUAAGCGUUUGGAGAGGAGGU ...................................................................(..(...............)(..................))...................................... ...................................................................(..(...............)(........(..)......))...................................... ...............((..................................................(..(...............)(..(...)...........))......)(...............).)............ >CP000726.1/1414382-1414259 AAACAAAUCAUGCCGAAUCUUCUUUAUGAAGUACCGGGGAUACUCUUGGGGUGAAUCUCUUAGGAAUAGGGUACCUCUAACCCGAACCCGUCAACUAACCUGGGAGGCAAUAUGGAGGGAUUUA ...................................................(..(..........)(.................))...................................... ...................................................(..(..........)(......(..).))............................................ ..................((...............................(..(..........)(......(..).))............)(............).)............... >CP000382.1/667370-667242 AUCUGAACAAUGCCGAAUCUCCAUUUGGAGUACGGGGGAUAUAUUUUGGGGUGAAACUUAUUUUUAUAUAAGUAGGGUUCCUCAAUCCUAACCCGUCAACUAACCUCGGAGGCAAAACGAGGAGGAAAU ...................................................(...(................)(..............))....................................... ...................................................(...(................)(.....(..).....))....................................... ..........................((.......................(...(................)(.....(..).....))...........)(.......).)................ >CP000141.1/2221513-2221384 AUUAACCAAACGCUGAAUUCCCGUUACGGGAAGCGGGGGAACCACUUUUUGGGGUGAAUCCUUUUCAGGUAGGGCGACUCCUUCCGCCCGAACCCGUCAGCUAACCUCGUAAGCGUCGAAGGGGGAGCAA ..............(..(.............)(...............................................................))................................ ..............(..(.............)(............................(....).............................))................................ ......((......(..(.............)(............................(....).............................)).....)(................).)...... >AP008230.1/1719300-1719165 UUAUAAUAAACGCCUAAUCUGGGGUAUCCUAGAGCGGGGGACUAAAUUUCUGGGGUGAAUCGCACCUCCUGUGCGUAGGGCUUACACUUUCGCCCGAAUCCGUCAACUAACCCCGUAGGCUAAGAAAGGUGUCUGA ..............(..(..............)(.................................................................................))................... ..............(..(..............)(..............................(.....)............................................))................... .....((.......(..(..............)(..............................(.....)............................................))....)(.....).)..... >CP000612.1/2967251-2967121 UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU .....................................................(..(.............)(.................))........................................ .....................................................(..(.............)(.......(..)......))........................................ .......................((............................(..(.............)(.......(..)......)).......)(............).)................ >AE017225.1/3137586-3137727 UAAAACCUUUUGCUGAGUCCAAAUUUUGGAGCGGGGGAACCACUUUUGUAGCUAUGCUACUUGGGGCGAAUCUUUUUUAAGUAGGGAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG ....................................(.....(.....................)(............................)).............................................. ....................................(.....(.....................)(.........(....).............)).............................................. ........((..........................(.....(.....................)(.........(....).............)).................).(....................).)... >CP000721.1/3440152-3440282 AUAAUUAUAACGCUGAAUCUUUUUGAACGGGAGAACCAUUUUUUGGGGUGAAUCUUAUUUUAGGAUAAGUAGGGUUAUUUUCUUCAAUCCGAAUCCGUCAGCUAAUCUCGUAAGCGUUGAAGAGAAGUUUU .............(...(...............)(..................................))............................................................ ..............(..(.......)(...............................(....).................................))................................ .....((.......(..(.......)(...............................(....).................................))......)(................).)..... >BA000004.3/632283-632434 CACCUUUAAUCGCUGAAUCUCUAUUGAGAGCGGGGGAACCAUACCUGACAGAGUUGUUUCUGUCUUGGGGUGAAUCUUAUGUUUUUUAUAAGAAGGGAUACUCUCCAUCCCUAAUCCGACAGCUAACCUCGUAAGCGUUGAUUCGAGAGAGG .......................................................................(..(.................).(.........)).............................................. .......................................................................(..(.................).(.(.....).)).............................................. .............((........................................................(..(.................).(.(.....).)).........)(......................).).......... >AE015927.1/2209149-2209011 AUACGUACUAUGCUGAAUCCUAUUUAAAAAAAUAGGUACGGAGGAACCAAGAAAUAGGGGUUAAUCUUUAAAUGUUUAAAGAAGGGAAAACCUUGACCUAACCCGUCAGCUAACUUCGGAAGCAAGAAAGGUGGAAAAA .............................................................(..(................)(...............))....................................... .............................................................(..(................)(.....(....)....))....................................... .........((..................................................(..(................)(....(.....)....))............)(...........).)........... >AAOX01000019.1/14342-14479 UCGAAAGAUGCGCUUAAUCUUUUAAAGAGCGGGGGAUCCAACCGGCAUACACAUGCCUCGGGGUGAAUCCUUUACAGGUAGGGCACUCUCAAAGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUAUUGAGAGGACAA ......................................(...(..............)(..................................)...)........................................ ....................................(......(............)(........................(......)........))...................................... ..(.(...............................(......(............)(........................(....)..........))...........)(....................).).. >AAWL01000006.1/97044-96924 AGCUAUAUAAAGCCUAAUCCAGCUCAGGAGCGGGGGAACCAUUACUGGGGUGAAACUCUUUAGGAGUGGGGUGCCUUCAACCCUAACCCGUCAGCUAACCUCGUCGGCUUAGAGAGGAGAA ...................................................(..(...........)(...............)).................................... ...................................................(..(...........)(.....(..)......)).................................... ...(.(.............................................(..(...........)(.....(..).....).)............).(...............).)... >AAOX01000003.1/202757-202896 UGACCUGAUCCGCUGAAUCCAUACAGAACGGAGGACCCAACUGAUUAUUCCAGAAUAAUUAUGGGGUGAAGCCGAAAGGCCGGGGGACUUCUGCCUUCCGAACCCGUCAGCUAACUUCGUAAGCGUUGCAGGAGAGAGGA ...................................(....(.....................)(........................................)).................................. ...................................(....(.....................)(.......................(....)...........)).................................. ......((...........................(....(.....................)(.......................(....)...........))................)(.........).).... >AP008230.1/5140258-5140118 AAUUAAGUGAAGCUGAAUCUGAGGUACAAAGCCUCAGAACGGGGGAAACGUCACGUGGGGUGAAUCGCAGGAUAUUGCGUAGGGCAUACACCUUUUGCCCGAAUCCGUCAACUAACCUCGUAAGCAGGAAAGGUGGUCAAA ............................................(..(.......)(....................................).)............................................. ............................................(..(.......)(...............(.....)..............).)............................................. .........(.(................................(..(.......)(...............(.....)..............).)...........)(.........................).).... >AP006840.1/606473-606333 CGUCCACAAACGCUGAAUUCCCACCAGGAAACGGGGGACCCAGAAUCCACCAGGGGCCAAGCGCAGUGGCUUCACUGCCCGGGCGACACUCCUGCCGUCCGCGCCCGUCAGCUAACCCCGUAAGCGUCGCAGGGGGAGACC .........................................................(..(.................)(....................))....................................... .........................................................(..(.................)(.......(....).......))....................................... ..............(.(........................................(..(.................)(.......(....).......)).....).(...............).)............. >AAWL01000001.1/57092-56953 AACAAAGCAAAGCCGAAUUCCGUAUGGAAGCGGAGGACCCACCUUUUUGGGGUGAAUUCUGCCACAAGCAGAAAGGAUGUUUACCUCUCUUGCCAUCCUAACCCGACAGCUAACUUCGUAGGCUAAAGCAAAGAGGUCGA .....................................................(..(...............).(......................))......................................... .....................................................(..(...............).(.........(...)........))......................................... ...((................................................(..(...............)(.........(....).........))...........).(.....................).).. >CP000764.1/2226760-2226900 UAAAACCUUUUGCUGAAUCCACUAUGUGGAGCGGGGGACCCAUUUUUGUAGCAUUUGCUACUUGGGGCGAAUCUUUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGGA ..............(..(...........)...(..........................................................................))............................... ..............(..(...........)...(........................(......)..........................................))............................... .....(.(......(..(...........)(.............................(..)............................................))......)(...............).)..... >CP000721.1/1710119-1709985 AUAUAUGUAACGCUUAAUCACUUUGAACGGGAGAACCAUUUUUUGGGGUGAAUCUUAUUACACGAUAAUAAGUAGGGUUAAUUUUCUUCAAUCCGAAUCCGUCAGCUAAUCUCGUAAGCGUAGAAGAGAAGUUUU .............................(..(.......)(......................................................).).................................... .............................(..(.......)(.................................(....)...............).).................................... ......................((.....(..(.......)(.................................(....)...............).).....)(.......).)................... >BA000028.3/1706087-1706245 CCUUUUUAGUCGCUGAAACUGUUGCUUUAGUAUUGUGCAGUGCGGGGGACCCAUUUUUGGCAAUAAAACAUUUGUCUUGGGGUGAAUCUAAAUAUUUAGAAGGGAUACUUUAUGUCCCUAAUCCGACAGCUAACCUCGUAAGCGUCAUAGGGAGAAAAG ...................................................................................(..(............)(.................))....................................... ...................................................................................(..(............)(.......(..)......))....................................... ..................((...............................................................(..(............)(.......(..)......)).......).(...........).)............... >CP000232.1/2197504-2197633 UAUUUUUUAGCACCGAAUUCCCGGGUAGGCGGGAAACGGGGGAUAUUUUUGGGGUGAAGAGCCAAAGGCUCCGGGCUAACUCUCGGUCCGAACCCGUCAACUAACCUCGUAGGUGUGCGAGAGUGGAGGU ......................................................(..(.............)(...............).)....................................... ......................................................(..(.............)(.....(..)......).)....................................... ......(..(............................................(..(.............)(.....(..)......).)........................).(....).)..... >CP000232.1/459162-459290 AAUAAGCGAGCGCUGAAUCCCUGAAUAGGGAACGGGGGAACCACUUCUUGGGGUGAAUCCUUUUUCAGGUAGGGUUAACUUUCGACCCGAACCCGGCAGCUAACUUCGUAAGCGUAGAAAGGUGAGGUG ............(...(..............)(.............................................................))................................. ............(...(..............)(.............................(...)...........................))................................. .......((.....(..(............)(..............(..).............................................)).....)(............).).......... >AAFX01048773.1/685-551 ACAACUAAAACGCUCAAUUCCCGAGAAGGGGAGCGGGGGACCCAAUCCGUUGGGGCGAAUGGUCCGCUUGGACCUAGGGCAAGCUCUUCAUGCCCGAGCCCGACAGCUAACCCCGUAAGCGUGGCGAGAAGAGCU ........................................................(..(..............)(...................))...................................... ..............(..(.............)(.......................................(...)......................................)).................. .......(.(....(..(.............)(...............................(....).............................................))....)(....).)..... >CP000764.1/711905-712051 GUUUUUGUAACGCUGAGUCCAAUGAUUUGGAGCGGAGGAACCAAAUGGUGCAUGGUCACUAGGGGUGAAUCUUUCAUGAUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUUUUGAGAGAGGGUGG ....................................(..(........)(.......................................))........................................................ ....................................(..(........)(.................(....)................))........................................................ .............((.....................(..(........)(..................(...)................))..................)(.............).).................... >AAOX01000002.1/156408-156546 AAAAUGAAUCGGCUUAAUCUCAUAUUGAGAGCGGAGGAACCAAUUUUUGGGGCUAAUCCUGCAGGAAGCAGGAGGGAUGAGAAUGAUCUUUCGCCAUCCUGCCCGUCAGCUAACUUCGUCGGCUAAAGCGAGUGAGGUC ....................................................(...(...............)(.........................))...................................... ..............(..(...........)(...........(....).............................................))............................................ .........((...(..(...........)(...........(....).............................................)).......)(.......................).)......... >AAWL01000002.1/117860-117729 AUACUAAACGUGCCGAAGUUCCUUCAAAGGAACACGGAGGAACCAUUACUGGGGUGAAUCCGCACAUGCGGUAGGGAUUUCCCUUAUCCCGAACCCGUCAGCUAACUUCGUAGGCAGAGAAAGGGAGUGGUU ......................................................(..(.............)(.................))........................................ ......................................................(..(.............)(......(....).....))........................................ .........((...........................................(..(.............)(......(....).....)).......................)(......).)...... >AE001437.1/3232090-3232211 UAUCAUUAGCCUAAAUUUUAAAAACGGGGAAACCAAUUUUUGGGGUGAAUCGCAUAAUAUAUGCGUAGGUUUGUGCCUUUACCGAAUCCGUCAGCUAACCUCGUAGAAUAAAAGGAGGAAGA ..............................................(..(...............)(..........).).......................................... ..............................................(..(...............)(..(....)..).).......................................... ....((........................................(..(...............)(..(....)..).).................)(...............).)..... >AE008691.1/1853404-1853270 UAAUCGUUAUCGCUGAACCCGAAAAGGGGCGGGGGACCCACACUUUUGGGGCGAAUCUCUUCCUACGGGAAGAGUAGGGUUACUCCUUCGACCCGAGCCCGUCAGCUAACCUCGCAAGCGUGGGAAGGAGAAAUA ....................................................(..(..................)(..................))....................................... ....................................................(..(..................)(........(..)......))....................................... ........((..........................................(..(..................)(......(....)......))...........)(..............).)......... >CP001336.1/3262209-3262073 AAGAAAUGUGGGCUGAAUCCGGACCGUGUGUCUGGAACGGGGGAUAAUCUUUUGGGGUGAAUCGCAGUCAUGCGUAGGGCUUGCACCUUUUUGCCCGAAUCCGUCAACUAACCUCGUAAGCGACGAAAGGUGGAAAA ...........................................(...(......)(........................))....................................................... ..............(..(.................)(............(....)..................................)).............................................. .((...........(..(.................)(............(....)..................................))..........)..(..........................).)... >AE001437.1/1374236-1374371 UCCUUAAGAGUGCCGAAUCUUAAUAAUAUUUAAGUACGGGGGAACACAUUGUGGGUGAAUCUUACGACUAUUCGUAAGUAGGGUGCCUUCAACCCGAAUCCGUAAGCUAACCUCGGAGGCAAAAUUGAUAAAGGAA .......................................................(....(................)(.................))...................................... .......................................................(....(................)(......(..).......))...................................... .............((.........................................(..(..................)(....(.....)....))............)(....).).................. >AE008691.1/1020677-1020802 AGUUAAAACAUGCCGAAUCCCCGAUAAGGGGUACGGGGGAUGUAAAUUUGGGGUGAAUCCACGUAUUGUGGUAGGGUGGCCCUCACCCGAACCCGUCAACUAACCUCGGAGGCAAAGGGGGUAAAU ..........................................(..(...................)(...........................)).............................. ..........................................(..(...................)(..........(.....)..........)).............................. ......(..(................................(..(...................)(..........(.....)..........))......)(.............).)...... >BA000043.1/3286126-3285968 CCCUAAAGAUCGCUGAAUCCGAAUAGGAGCGGGGGAACCAACCGUGGCUUUGUGCGCCACAUGGGGUGAAUCCUGUUCAGGACGCCUGUUCUGAACGGGUAGGGUGACUCUCAUCACCCGAAUCCGUCAGCUAACCUCGUAAGCGUGUUGAGAGAAGGG ...................................................................(..(............................)(..................))...................................... ......................................(..(....................)(..................(....)..............................))....................................... ..........((..........................(..(....................)(..................(....)..............................))..........)(.................).)....... >AE008691.1/927258-927390 ACAUGCUAAACGCUGAAUUCGUUAAGAAGCGGGGGACCCACUCUUUUGGGGUGAAUCCAUCUUUUAAAAGAUGGUAGGGUUAUCUUUCGACCCGAACCCGUCAGCUAACCCCGUAAGCGUUGAAAGAGAAGGA ......................(..(...................)(..............................................))...................................... ......................(..(...................)(...............(....).........................))...................................... ........((............(..(...................)(...............(....).........................))..........)(..............).)......... >CP001348.1/597732-597876 AAUAAUUUAUCGCUGAAUUAUGGCAGUUUGACUGCUAUAAGCGGGGGAACCAUUCAAAUGGGGUGAAUCCUGUGUUAUCAGGUAGGGUUAGUCUCUUACAACCCGAAUCCGGCAGCUAACUUCGUAAGCGUUGGGGAGAAAGUGA ..............(..(.....................)(............................................................)).......................................... .............(..(.......................)(..............................(........)......................))....................................... ..........((.(..(.......................)(...............................(....).........................))......)..(.................).)......... >CP000853.1/56237-56106 AUAUACAUAGCGCUGAAUUCUUUUAAGAAGCGGGGGAACCAUUAUUUUGGGGUGAAUCUCAUAUCUAUGAGACGGGUCAACUCUUUCGAUCCGAAUCCGUCAGCUAACCUCGUAAGCGUUGAAAGGGGAGAC ...................................(..(...............................).(...................))...................................... ..............(..(..........)(..............................(......)............................................)).................. .....((.......(..(..........)(..............................(......)............................................))....)(....).)..... >AL009126.3/3188193-3188341 UCUCUUUUACCGCUUAAUCAAACACGAACGGGGGAACCAACGAUUGGCUGUUUUAUUAACAGCCUUGGGGUGAAUCUUACUAAGUAAGAGGGGGUACUCUGAAUCCCUAAUCCGACAGCUAACCUCGUAGGCGUAUACAGAGAGGAGGU ......................................................................(..(...............)(...............).)........................................ ......................................................................(..(...............)(.....(...).....).)........................................ ......(.(..............................................................(..(.............)(......(...)......))............).(...............).)....... >CP001022.1/2525926-2525774 UCUCAAAGUACGCCGAGUUCAUGAUUGAAGCGGGGGACCCAACCGUCACGACACGUGACACGGGGUGAAUCUUCUCAGACAAGAGAAGUAGGGCAAAAUCCUAGGUAUGCCCGAAUCCGACAGCUAACCUCGCAGGCGUUUUAGGAGGGAACG ..................................................................(..(..................).(....................))........................................ ..................................................................(..(..................).(........(..)........))........................................ ....((............................................................(..(...................)(.......(....).......)).........)(...................).)....... >AE008691.1/890816-890945 UUUGCAAUCUUGCCGAAUCCGAAAGGUACGGAGGAACCGCUUUUUGGGGUUAAUCUGCGGAUUCCCGCAGUAGGGAUGCCUUCUGUCCCGCACCCGACAGCUAACUCCGGAGGCAUUAAAGGAAGGAGAU ................................................(....(................)(.................))....................................... ..............(..(........)(...............................(....)............................................))................... .......(.(....(..(........)(...............................(....)............................................))...)(....).)....... >CP000924.1/1503502-1503372 UAUGCAAUCUUGCCGAAUCCGAAAGGUACGGAGGAACCGCUUUUUGGGGUUAAUCUGCAGUGAAGCUGCAGUAGGGAUACCUUCUGUCCCGCACCCGACAGCUAACUCCGGAGGCAAUAAAGGAAGGAGAU ................................................(....(.................)(.................))....................................... ................................................(....(.................)(.......(..)......))....................................... .........((.....................................(....(.................)(.......(..)......)).......................)(........).)... >CP000850.1/1933321-1933455 CGUGCCGACCCGCUCAAUCGCCGUAAGGCGAACCGGGGACCCGUUCCACCUGGGGUGAAUCCGCGAGCUUCGCGGUAGGGCGUACUUCCCGUCCGAAUCCGUCAGCUAACCCGGUCGGCGGUAUCGGAAGGAGUC ..............(..(.......................................)(.................))......................................................... ..............(..(.......................................)(......(...)......))......................................................... ....(.(.......(..(............)(.................................(...)............................................))......)(......).).. >CP000923.1/2119184-2119053 AAAUGCUAAACGCUGAAUUCGUAAAGAAGCGGGGGAACCACUUUGGGGGUGAAUCCAUCUUUUGAUAAGAUGGUAGGGUUAUCUUUCGACCCGAACCCGUCAGCUAACCUCGUAAGCGUUGAAAGAGGAGGA ..................................................(..(...................)(.................))...................................... ..................................................(..(...................)(........(..).....))...................................... .......................(.(........................(..(...................)(........(..).....))..)(....).)........................... >CP000903.1/3134671-3134815 UACAACCUUUUGCUGAGUCCAAAUUUUGGAGCGGGGGAACCAAUUAUGUAGCUUUUUGCUACUUGGGGCGAAUCUUUUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG ........................................(..(.....................)(...........................).)................................................ .......................................(.....(.................)(............(.....)............))............................................... ...............((......................(.....(.................)(............(.....)............)).............)(...............).).............. >CP001186.1/738417-738564 UUUUUGUAAACGCUGAGUCCAAUUAUAUGGAGCGGAGGAACCAAUUUGUGCGUCUGCACUAGGGGUGAAUCUUUCAAAUUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG ..................(.......(..................................).(.........................................))......................................... .........................................(..(................)(...........................(.....)..................))............................... ......(..(...............................(..(................)(.....(...)..........................................))...............)(........).)... >AL939125.1/103160-103305 AGUCCCCGUACGGCGCGAGCCAGGGGAGCCGGGGACCCAUCGCAGUCCCUGGGGUGAAUCGGACGCCCGCGCGCACCGCGAGGGGGUCCGUAGGAGACCUUCCACCUCCGAACCCGUCAGCUAACCCGGUAGGCGAGAGGGAAGGA .......................................................(..(...............................).(........))........................................... ..............(...(.................................)(..........................................(....)..))........................................ >BX927150.1/172169-172001 CAUUCAUGUGGGCCAUAUUGCAGACAGGGACGGGGAAACCACCCACCAUCUUUUCACAAAAGAAGGCAUGGAGGCCAACUCCUUGGGGUGAAGCCAGACAUCCACUGGCAGAGCAACUCCUCCGCUCUAACCCGACAGCUAACCUCGACGGCGACAAAUGAGAGGAAAA .........................................................................................(..(...............)(.................))........................................ .........................................................................................(..(...............)(......(....).....))........................................ >AAXV01000026.1/33590-33441 AUUUCUAAAUCGCUGAAGCAAACUAGACGCGGGGGACCCAUUUUAGACGGAGUGCAUAAGCAAUCCUUGGGGUGAAUCUCUUCUUUUGAAGGGUAGGGCUACUCAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUAAGAGCAGAUAA ...................(..(......................).(..............................................................)..).................................... ...................(..(......................).(...........................(....).............................)..).................................... >AAJM01000133.1/9684-9540 AACCUUAAAUCGCUGAGUUCCAGAAAUGGAGCGGGGGAACCAAUUUUGUGCAUCGUCACUUGGGUGAAUCUUUCAGUUUUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUUAGAGAGGAGGU .................................................................(..(................)(..................))...................................... .................................................................(..(................)(........(..)......))...................................... >AE017194.1/3159877-3160019 UAAAACCUUUUGCUGAGUCCAAAAUUUGGAGCGGGGGAACCAUUUUUGUAGCUUUGCUACUUGGGGCGAAUCUUAUUUAAGUAGGGAAACUCUCACUUCCCGAGUCCGACAGCUAACCUCGUAAGCGUAAUGGGAGAGGAAGG ...................................................................(..(..........)(...........))............................................... .............(..(.............)(.........................(......)..................)).......................................................... >AAOX01000003.1/202929-203071 AGCACUGAAACGCUGAAUCUUAUUGAGCGGGGGAACCAACUUUUGACUGCAUGCUGCAGUCUUGGGGUGAAGCCAUGAAUGGCAGGGAGACUCUUACCUUCCUAAUCCGACAGCUAACUCCGUAAGCGUUGUUUAAGAGAGUG ...................................................................(...(..........)(..................))....................................... ................................(...(...............................)(..................(........).......)).................................... >CP000667.1/3890461-3890591 GCGGGGCCACCGCCUAAUCACCUGCCAGGGUGAGCCGGGGAACCAGGUACCUGGGGUGCAUCCGCGUCAGCGGUAGGGAUCUUCCGUCCCGAACCCGUCAGCUAACCCGGUCGGUGGUUGACGGAAGGACA ......................................(..(............)(..............................))........................................... ......................................(..(............)(......................(...)...))........................................... >CP000728.1/3775383-3775509 UACUAUUAUUAGCCUAAGUUUUUUAAAACACGGGGAAACCAAAUUUUGGGGUGAAUCGUAAAAUUACGUAGGUUAUACCUUUUCCGAACCCGUCAGCUAACCCCGUAGGCAAAAGGAGUGAGAAAAU .......................................(..(....................)(.............................))............................... ..............(..(..........)(...........(...)......................))......................................................... >CP000002.3/542499-542640 UAGCGCCACACGUUUAAUCCUUUAGUAGGAGUGGGGGACCCGAUCAUUUGGGGUGAAUUUUUCUGUUCCCGUGCGAACCGAAAGACGGACAUCUCUUCGUCCGAACCCGUCAGCUAACCUCAUCAACGUGAAGAGAGUCAUG ......................................................(..(..........................)(................))...................................... ......................................................(..(..........................)(.....(...)......))...................................... >AE015927.1/2711017-2711139 AAUAACAUAAGCCUAAGUUUAAAACGCGGGGGAACCAUUAAUUGGGGUGAAUCACAUUUAUUUUGUGUAGGUUAGCCUUUACCGAACCCGUCAGCUAACCCCGUUGGUAAAAGGAGUGAAUAA ..............................(......(......................)(......................))..................................... .............(..(.......)(............................................(....)..............).).............................. >BA000030.3/5911883-5911718 AUCAAUCCACCACUCACUCACGCACGGCAGGAGCGGGGAAACCAGGUAAGUCGCCGUCCGGUCACCACGCCGGAGCGGCUCGGGGUGAAGCCGCGUCCUCGGACGCGGCCGGGCAUCUCCAGCCCGAACCCGACAGCUCACCUCGCAGGCGCCGGAGAGGAAAUUC .....................................................................................(...(..................)(...............))....................................... .....................................................................................(...(..................)(.....(...).....))....................................... >AAXV01000025.1/10441-10579 AUUUAAUAAUGGCCAAAUCUCAAACAUUGAGAACGGAGGACCCAAUAUAUUGGGGUUAAUUCUGAAAUACAGAAAGGAUGAGAAACUCUUUCGCCAUCCUACCCGUCAGCUAACUUCGUCGGCUAAAGCGAAGGAGGUC ........................................................(..(.............).(......................))....................................... ........................................................(..(.............).(........(...).........))....................................... >CP000673.1/279064-278931 CAAUAUCAUUAGCCUAAGUUUUAUAAAAAACACGGGGAAACCAGUACUAUUUUGGGGUGAAUCGUAAUUUAUUACGUAGGUUAUGCCUUUUCCGAACCCGUCAGCUAACCCCGUCGGUAAUAAGGAGGAUAUAU ........................................................(.....(............)(...........))............................................ ..............(..(............)(.............(...)..........................))........................................................ >AE017333.1/525158-525301 AAUCCAAAAUCGCUUAAUCUAAAAAAGAGCGGGGGAACCAUUUAGAGGCGUACAGCCUCCGGGGUGAAUCCUUUUAAAGGUAGGGCAAACUCUCGUGAGCCCGAAUCCGUCAGCUAACCUCGUAAGCGUUAAGAGAGAGGGAGA .................................(....(........................................)(......................))....................................... .................................(....(........................................)(.........(..).........))....................................... >ABDA02000001.1/440841-440988 UUUUUGUAAACGCUGAGUCCAAUUAUAUGGAGCGGAGGAACCAAUUUGUGCGUAGGCACUAGGGGUGAAUCUUUCAAGUUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG .........................................(..(................)(....................................................))............................... .........................................(..(................)(........(....)......................................))............................... >CP000612.1/3033561-3033714 UAUUAAAACAGGCCGAAUCUCCGGAAAUUCCGGAGUACGGGGGACAAAAAUUAAUGGGGUGAAUCCGUAACUUUUUCGGAGGUGCAAAAAAGUACGGUAGGGUGCCCUCAACCCGAACCCGUCAGCUAACCUCGAAGGCCAGAGGAGGGUAAAA ...........................................................(...(.................................)(...............))...................................... ...........................................................(...(.................................)(.....(...).....))...................................... >CP000850.1/4190713-4190844 GCGUGGCCGCCGCCUAAUCGCCUGCCAGGGCGAGCCGGGGAACCAGGUACCUGGGGUGCAUCCGCGUCAGCGGUAGGGAUCUUCCGUCCCGAACCCGUCAGCUAACCCGACCGGCGGUUGACGGAAGGACAU ......................................(...(..........)(............))............................................................... ..............(..(..............)(...........................................(....)........))....................................... >AP008230.1/4597555-4597682 ACUUAAUAUGGGCUUAAUUUCCCAAGGGGAAAACGGGGGAACCAAUUUAGGGGUGAAUCGUUUUAAACGUAGAGCAUGUUUCAGCUCGAACCCGUCAGCUAACCUCGUAAGCAUUGAAGCACAUGAGG .....................................................(..(............)(................))....................................... .....................................................(..(............)(.......(..).....))....................................... >CP001176.1/769318-769465 UUUUUGUAAACGCUGAGUCCAAUUAUAUGGAGCGGAGGAACCAAUUUGUGCAGUGUCACUAGGGGUGAAUCUUUCAAGUUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG ..................................................................(..(........)(....................)).............................................. .............(...(............)(...........................................(....).............................................).)................... >AP008230.1/891859-892004 UGCAGUCAAGGCUGAAUUUCCCAAAAAGGAAAACGGGGGAACCAUAUUGGGGGUGAAUCAUUGUUAAGGAGAGCAAACUCCUUAAAAUGACGGAAAGGUAUCAUUCCGAACCCGGCAGCUAACCUCGUAAGCGUGUGAACCGUUUU .....................................................(...(...............................)(................))..................................... >AAEK01000002.1/19276-19421 AACCUAAAAUCGCUGAGUUCUAGAAAUGGAGCGGGGGAACCAAUUUUGUGCAUUGUCACUUGGGGUGAAUCUUUCAUUUUUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUUAGAGAGGAGGU ..................................................................(..(................)(..................))...................................... >AF299117.1/4182-4326 UGUAGUCAAGGCUGAAUUUCCCAAAAAGGAAAACGGGGGAACCAUAAUGGGGGUGAAUCACUUUUUAGGAGUUAAACUUCUUGAAGUGACGGAAAGGUAUCAUUCCGAACCCGGCAGCUAACCUCGUAAGCGUGUGAACCGUUUU .....................................................(...(..............................)(................))..................................... >CP000478.1/2207806-2207671 CCGGAGUAAUCGCCGAGUCCUGCAUGGGCAGGAGCGGGGGAACCGAGUUUUUGGGGCGUAUCGCCGAUCAUGGCGAAGGGCAAGCUCUUCGGCCCGAGCCCGUCAGCUAACCUCGCAGGCGUCGAAGGGUAGAGCC .............(..(................)(...............................................................................)..).................. >AL939115.1/44787-44621 UCGCGUCAAGCGCCGAAGGCAGGAGCGGGGGACCCAAGGUAAGUGCCGCACCGGGCAGUUGAGCCGGAGCGGCUAGGGGUGGAGCCGAGUUCCGCGAGGAACCCGGCCGGGCAACUCAACCGGCCCGAACCCGACAGCUCACCUCGCAGGCGUCGGUGAGGGGAUCA ................................................................................(..(......................).(......)).................................................. >AE017180.1/2728254-2728393 ACAUUCAUGCAGCCGAGAUCCGUUCGCGAGAACGGGUGCGGGGGACCCACUUCGGGGGCGUAUUCCGGCAAUGGCGCCGGAUAGAGGACUUUCAGCCUCGAGCCCGUCAGCUAACCUCGUAGGCAUCUGGAAGGGCACGA ...............(...(..............)(...............................................................................))....................... >CP000673.1/658090-657951 CUAUAAAACAAGCCUAAACUUCCAAAACUGGAAUCAAGUGCGGGGGAUAACAAUAUUUGAGGUGAAUCUUUUUAUUAAAAAGUAGGACAAUCCCUCUCCGAACCUGUCAACUAACCUCGUAGGCUAAUUAGGGAGGAUAU ...............................................................(..(................)(.......)).............................................. >CP000481.1/2373007-2372860 ACGUCGGAGCCGCCGAACCUGCCUCGCAGGACCGGGGACCCAGCACCGGCGCACAGCGCCCAGGGGUGAAUCCGGUGUUCGCACCGGUAGGGCGAUCUUCCCCGCCCGAACCCGUCAGCUAACCCGGUAGGCGGUCAAGGGAGAGAGG .....(..(............................)(....................................................))....................................................... >AAES01000021.1/15273-15418 AACCUAAAAUCGCUGAGUUCCAGAAAUGGAGCGGGGGAACCAAUUUUGUGCAUCGUCACUUGGGGUGAAUCUUUCAGUUUUGAAAGUAGGGCUACUCUUUAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUUAGAGAGGAGGU ....................................(...(........................................)..(.......................)).................................... >CP000232.1/1412184-1412326 UAUCCUGGAACGCUGAAUUGCGGUGUGCAGCCGUAAGCGGGGGACCCAAUUUCCCGGGGUGAAUCUUGCCGGUUAUACCGGUGGGUAGGGCUAGACGUGGCCCGAAUCCGUCAGCUAACUUCGUAAGCGUGAAGGGAAUACCG .........................................(..(.......................................)(..................))..................................... >CP001348.1/872452-872592 GUACAAAAUAUGCUGAAUCCUUGUGAUUUAUGACGAGGUACGGAGGAACCAAGAAAAGGGGGUUAAUCCAUUUUAUAUGGUAGGGUGAUCCUAUUACCCGAACCCGGCAGCUAACUUCGGAAGCACAGUAUAGGAGGAAUA .............................................(..(..............................)(...................))....................................... >CP001083.1/1451441-1451318 AAACAAAUAAUGCCGAAUCUUCUUUACGAAGUACCGAGGAUACUCUUGGGGUGAAUCUCUUAGGAAUAGGGUACCUCUAACCCAAACCCGUCAACUAACCUGGAAGGCGAUAUGGAUGGAUUUA ...................................................(..(..........)(...........))............................................ >CP000001.1/1793577-1793723 UUUUCUAAAUCGCUGAAACCGCAUGGUGCGGGGGACCCGUUCUUAUGGAUUAGUUCUUAAUCCAAUGGGGUGAAUCCUUGAAAAAGGUAGGGCUACUCAUAGGCCCGAAUCCGACAGCUAACCUCGUAAGCGUUAUAUUGAGAAGGA ..............(..(.............)(..............................................................................)..)................................ >CP000850.1/603238-603111 GCGGUACCACCGCCCAAUCGCCGCGGGGCGGGCCAGGGAACCAGGCACAUGGGGUGAAUCCGCAUCAGCGGAGACCACUUCCGGCCCGGACCUGUCAGCUAACCCGGUCGGCGGUCAACGGAAGGGAU ..............(..(............)(...........................................................................))................... >ACMD01000040.1/12378-12525 UUUUGUAAUACGCUGAGUCCAAAUGUAUGGAGCGGAGGAACCAAUUUGUGCGUCGUCACUAGGGGUGAAUCUUUCAAUGUUGAAAGUAGGGCUACUCUCAAAGUCCGAAUCCGACAGCUAACUUCGUAAGCGUCUUGAGAGAGGACGG .............(..(.................................)(..............................................................))................................ >CP001348.1/2317685-2317544 AAAUUAAAAAGCUGAAUCCUCGAAAGAGGUACGGAGGAACCAAGAUUUGGGGUUAAUCCAUUCUUUAUUCUUUUAUUGAAUGGUAGGGAGGUCCUAUUGCCCGAGCCCGUCAGCUAACUUCGGAAGCGCUACUAUAGGAGGG .....................................................(..(..........................)(.................))...................................... >BA000030.3/2009780-2009620 CCCGCACACUCACCCGUGCCCGGCAGGAGCGGGGGACCCACAGGCAACAACGCCUGUUCCGGUCUCCGGAACAGGCUAGGGGUCAAGUCGCGCGCAAGCGCGGCCGGGCAUCUCCAGCUCGCACCCGACAGCUCACCUCGCAGGCAUCGGAGAGGAAUGCA ..............................................(...(.........................).(................................))................................................

	ORB			p-value	ORB frequency (per structure per nucleotide)	Means ratio
1	(.RA.()())			< 0.001		3.71

CP000612.1/2967251-2967121 UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU ...................................................................................................1............................... .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3. 12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
2	(.YU.)			< 0.001		1.31

CP000612.1/2967251-2967121 UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU ...................................................................................................1............................... .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3. 12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
3	(()(G)N)N			< 0.001		1.05

CP000612.1/2967251-2967121 UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU ...................................................................................................1............................... .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3. 12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
	ORB			p-value	ORB frequency (per structure per nucleotide)	Means ratio

	NCM			p-value	NCM frequency (per structure per nucleotide)	Means ratio
1	A(AU(C))			< 0.001		17.1
2	(YYC)			< 0.001		5.76

CP000612.1/2967251-2967121 UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU ...................................................................................................1............................... .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3. 12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
3	.N.		(URB)	< 0.001		0.78
4	((Y)U)R		(URB)	< 0.001		0.243
5	A(NY(Y))			< 0.001		4.83

CP000612.1/2967251-2967121 UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU ...................................................................................................1............................... .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3. 12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
6	(.CYCYN.)			< 0.001		4.52

CP000612.1/2967251-2967121 UAUUAAAAAACGCCUAAUUUCUAUUGAAAGCGGGGGAACCAGUUAUUAUGGGGUGAACUACCAGUGUGUAGCGGGCUAACUUUCUGUCCGAACCCGUCAGCUAACUCCGUAGGCGUAGAAAGUGGGGAAAU ...................................................................................................1............................... .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3. 12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
	NCM			p-value	NCM frequency (per structure per nucleotide)	Means ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).