D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major
D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences
J. Mol. Biol., 435 (2023)

yjdF RNA   (Rfam: RF01764)

Seed sequences
All NCMs (CSV file) (all) positive sequences (all) negative sequences (random) (training) positive sequences (training) negative sequences (testing) positive sequences (testing) negative sequences 

Options
Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN
Rfam
D-ORB
Augmented
G(GU)A
A(AA(A))
(.CYCY.)
A(NC(C))
(()(N)C)A
97.9
91.7
89.6
89.6
91.7
G(GU)A
(.CYCY.)
A(NC(C))
(()(N)C)A

% of positive sequence with ORB





Deep neural network:

5-fold cross-validation: 99.3 %
(± 0.336 %)
Decision tree:

5-fold cross-validation: 92.9 %
(± 2.21 %)
D-ORB structure
D-ORB structure decision tree:

5-fold cross-validation: 92.9 %
(± 2.21 %)
of AAPZ02000001.1/582696-582796
AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
((((((((((((((..(.((((((((((((..)))))))))(((((((..))))))).)))(..(((((.....).)))).)..)..))))))))))))))
...................................................................................................1.
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901

abstract shape: ((()())())

Number of sequences
Structure ORBs (out of 48) (%)
1 G(GU)A
 47 97.9
>AE015927.1/625938-626042
UUUAGUAGAGAUAAAAACACAGUUCGGUUGGUAGUCCGAACCUAUUUGAUUUUUAAAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAUGAUUAAAUU
.............................(..)........................................................................
>CP000413.1/273421-273525
CCUAAGGAAAGUAAAAACACGAUUCGGUUGGUAGUCCGAAUGUAUAAUUAUUAACUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAAAUUU
.............................(..)........................................................................
>ABDQ01000001.1/474183-474288
UUCUAUAGAGAUAAAAACACAGUUUCGGUUGGUAGUCCGAACCUAUCUAAUUUAACGUUAGCAGUAACCUGCCCUCCUGGGGUUGUCCCUUCUCUAUGUUUUAGAU
..............................(..)........................................................................
>AP006716.1/192943-193045
AUAGAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUGUAAUCAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCCUCAUUUCAAGUUAUAUA
.............................(..)......................................................................
>CP000764.1/2923703-2923605
CUGUAGAAAUACAAAAACACAGUUCGGUUGGUAGUCCGGACGCAUACGAGUAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUGAAUCUUUU
.............................(..)..................................................................
>CP000485.1/3979564-3979464
UGGAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
..............................(..)...................................................................
>AAVO02000014.1/31411-31532
AAUGACAAAGAUAAAAACGCAAAGCAUUUUAUUAUGCGAGAGCUGGUAGGUAGCCCAGCCGUCCUAUGUUUAUAGGGUAAGUAACCUGCCCCUCCGGGUUGUCCGUUCUUUGUUUGGAAAUA
................................................(..)......................................................................
>CP000416.1/2190739-2190641
AGUGACAGAAUAAAAAACACGGUCUGGUUGGUAGUCCAGGCGCGGCUGAAAGCCGUCAGUAACCUGCCUCCUUGGUUGUCCCUAUUUUGUUAGUCAUUU
.............................(..)..................................................................
>ABDT01000058.2/47084-46985
AUAAAAGGAGAUAAAAACACUAUUCUGUUGGUAGUCAGAAUCUAUUAUUUUAAUAGCAGUAACCUGCCCUCCUGGGUUGUCCGUUCUCUGGAAUUUUUUA
.............................(..)...................................................................
>ABAX03000012.1/28997-29098
CAGCGCAAAGAUAAAAACACAGUCCCGGCCGGUAGUCCGGGCGCAGAGAUAAAAGCUGUCAGUAACCUGCCUCCUCGGUUGUCCAUUCUUUGCUGCCAAAAG
..............................(..)....................................................................
>CP001598.1/3993206-3993107
UGAAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
..............................(..)..................................................................
>CP001336.1/4011715-4011819
UAAAAAUAACAUAAAAACACGGUCCGGUUGGUAGUCCGGAUGCGUUGAAUUGACCGGUGUCGUAUCCUUCCCCCUCGGGAUGUUCGUUGUUAGCUUUAGCAUAUA
.............................(..)........................................................................
>CP000413.1/275566-275671
UCUAUGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUAUAUAAUCAUAUAGCUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAUUUUU
.............................(..).........................................................................
>AAEK01000054.1/27482-27581
UGAAUGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
..............................(..)..................................................................
>AP008230.1/2980037-2980137
AACAUGGAACAUAAAAACACGGUCCGGUUGGUAGUCCGGAUGCGCCGAAUUGACCGGUGUCGUAUCCUUCCCCCCUCGGGAUGUCCAUUGUUCAUUAUUUU
.............................(..)....................................................................
>AAYW02000008.1/106021-105897
AAAAGUAAAGAUAAAAACGCAACGUAUGCAGUGAUGCAUACCAGAGCCGGUAGGUAGCCCGGCCGUCCUGCAUAUUAGGGUAAGUAACCUGCCCCUCCGGGUUGUCCAUUCUUUGCUCAUUUCAA
....................................................(..).....................................................................
>CP000903.1/4024493-4024394
UGAAAGAGAUACAAAAACACAGUUCUGGUCGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUAAUUUUUUU
..............................(..)..................................................................
>ACLT01000088.1/50310-50211
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUCUUUUA
..............................(..)..................................................................
>AE015929.1/268742-268639
AUAAAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUUACUUAUAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCAUCAUUUCAAUUUUAAAU
.............................(..).......................................................................
>AE017198.1/275419-275520
GCUAAGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUGUAUGAUUUAUUCAUAUCAGUAACCUUCCCUCCUAGGAUGUCCCUCUUUCCUCUUAUUUUU
.............................(..).....................................................................
>CP001283.1/3985527-3985427
UGAAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
..............................(..)...................................................................
>CP001186.1/4127317-4127218
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
..............................(..)..................................................................
>CP001176.1/4159074-4158975
UGAAAGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUCUUUUA
..............................(..)..................................................................
>CP000728.1/2191605-2191505
UAGCUUCGAGAUAAAAACACGAUUCGGUUGGUAGUCCGAAUGGGGUAAUUAGCCCUCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAAAUUUAGCUG
.............................(..)....................................................................
>CP000560.1/2746219-2746117
UAAUGAGAAUGAAAAAACACAAUUCGGUUGGUAGUCCGGAUGCAUGAUUUAAAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUCAGUAAAUU
.............................(..)......................................................................
>CP000721.1/1839650-1839548
UAUUUAAGAGAUAAAAACACUGUUUCUGUUGGUAGUCAGAACCUAUAUUAUAAUAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUGUGAAUUUAUA
..............................(..).....................................................................
>CP000423.1/2847352-2847256
CAUUGCGCUAUCAAAAACACAGUCUGGUUGGUAGUCCAGACGCGGCUUAGGCUGUCAGUAUCCUUCCUCCUUGGAUGUCCAGAUUGCGUGAAAAUCU
.............................(..)................................................................
>CP001083.1/2188308-2188208
UAGCUUUGAGAUAAAAACACGAUUCGGUUGGUAGUCCGAAUGGGGUAAUUAGCCCUCAGUAACCUGCCCUCCUGAGGUUGUCCAUUCUCUAAAUUUAGCUG
.............................(..)....................................................................
>AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
.............................(..)....................................................................
>AJ938182.1/408566-408666
AUAUAGAAGUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAGUUUUAAAACUGUCAGUAACCUUCCUCCUCGGGUCGUCCGUCAUUUCUAAUAAAACU
.............................(..)....................................................................
>AL935263.2/1767846-1767748
AUUAGCGAAAUUAAAAACACGGUCUGGUCGGUAGUCCAGACGCAGCAACGGCUGUCAGUAACCUGCCUUCCUUGGUUGUCCGAAUUUCGUUAGUGAAAU
.............................(..)..................................................................
>AL009126.3/1275756-1275858
GGUAAAGAAUGAAAAAACACGAUUCGGUUGGUAGUCCGGAUGCAUGAUUGAGAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUUAAUAUCUU
.............................(..)......................................................................
>AE001437.1/1718166-1718277
UUAUAAGAAGAUAAAAACACAGUUUGGUUGGUAGUCCAAACGCAUUUAUAUUCAUAUAAAAUAAAUGUCAGUAACCUGCCCUCGCGGGUUGUCCACUCUUCUUAAAAACUUA
.............................(..)...............................................................................
>CP000673.1/3572617-3572509
UAAAUUAGAGAUAAAAACACAGUUUUGGUUGGUAGUCCAAACCUGUCUAUAUUCUUAUAGAUGGAAGUAACCUUCCCUCCUGGGGUCGUCCCUUCUCUAUGUCAAAUUU
..............................(..)...........................................................................
>CP000387.1/2058556-2058454
AGCUACUAAGAUAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAAAAAACCAUUUUUUGUCAGUAACCUUCCUCCUUGGUUGUCCAUUCUUAGGGAUUUUUA
..............................(..).....................................................................
>ABBV01000209.1/1887-1792
AUAAAUAAAUAUAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAGCAAUGUAAGUAACCUGCCUCCUUAGGUUGUCCAUUCUUUAUAAAAAAAUU
..............................(..)..............................................................
>CP000114.1/99777-99875
UCGUUAUAGCAUAAAAACACGUUGCAGUUGGUAGUCUGCAAGCGUUCAGUGAACGUCAGUAACCUUCCCUCCAGGUCGUCCAUUGCAAUUUAAUAUUUA
.............................(..)..................................................................
>AE017194.1/3941275-3941176
UGAAAGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
..............................(..)..................................................................
>AM180355.1/2040488-2040585
AUCUAUAAAGAUAAAAACACAGUCUGGUUGGUAGUCCAGACGCAGCAAUAGCUGUCAGUAACCUGCCUCCUUGGUUGUCCGUUCUUUAGAAAGUAAUU
.............................(..).................................................................
>AGMY01000008.1/65276-65178
GAUUUAUGAUAUAAAAACACGUUGCAGUUGGUAGUCUGCAAGCAUCAUGAUGAUGUCAGUAACCUUCCCUCCAGGUCGUCCUUUAUCAAAUUUUCUUUU
.............................(..)..................................................................
>AE017194.1/1016995-1017101
ACUUUAGAGUGAAAAAACACAGUUCGGUUGGUAGUCCGGACGCAAUAAUUAUUUAAUUAUUGUCAGUAACCUUCCCCCCUGGGAUGUCCAUCACUCAUGUAAUAAAC
.............................(..)..........................................................................
>CP000726.1/2061998-2061898
UAGCUUUGAGAUAAAAACACGAUUCGGUUGGUAGUCCGAAUGGGGUAAUUAGCCCUCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAAAUUUAGCUG
.............................(..)....................................................................
>ABGC03000029.1/55866-55990
AAACGCAAAGAUAAAAACGCAACGUACAUCUUUGAUGUGCCAGAGCCGGUAGGUAGCCCGGCCGUCCUAUAUAAAUAGGGUAAGUAACCUGCCCCUCCGGGUUGUCCAUUCUUUGUUCAAUCAAU
...................................................(..)......................................................................
>CP000024.1/228896-229023
CCCAACUAAGAUAAAAACACAGUUCUGGUUGGUAAGUCCAGACACGUAGGCGAGCCUAUCAGUAACCUAAGGAUAUGAAUAGAAAUGAAGAGUAGUCCAUCAAGGCUACUCUUUUUCGUCAAAAGAAC
..............................(..)..............................................................................................
>ABED02000029.1/585317-585449
UAAAAGCAGGAUAAAAACGCAACGCAUUUCUUCCUGAGAGAUGCUAGAGCUGGUAGGUAGCCCAGCCGUCUGCACCGCACGGUGUAGGUAAGUAACCUUCCCCUCCGGGUUGUCCAUUCCUGUAAGGAUUUAU
.......................................................(..)..........................................................................
>ABCC02000044.1/34328-34178
AAAAGCAAAGAUAAAAACACAACGCAGGAUAAAAACCUGCAGAGCUGGUAGGUAGUCCAGCCGCAUUCCUAUAGUCCUGCUUUAACUGGCGGGGAGACAGGGAUGUCAGUAACCCUCCCUCCUUGGGUCGUCCAUUCUUUGUUCAUCACAU
..................................................(..).................................................................................................
>AARF01000365.1/613-724
GAAGUGGAGUGUAAAAACACAGUCUGGUUGGUAGUCCUAGACACACGUCGUCAUGACCAAAGACGUGUCAGUAACCUUCCCCCUCGGGAUGUCCCUCACUACGGGAACUUCA
.............................(..)...............................................................................
2 G(GU)A
A(AA(A))
 37 77.1
>ABDT01000058.2/47084-46985
AUAAAAGGAGAUAAAAACACUAUUCUGUUGGUAGUCAGAAUCUAUUAUUUUAAUAGCAGUAACCUGCCCUCCUGGGUUGUCCGUUCUCUGGAAUUUUUUA
............(..(.............(..)...................................................).).............
>CP000903.1/4024493-4024394
UGAAAGAGAUACAAAAACACAGUUCUGGUCGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUAAUUUUUUU
.............(..(.............(..)..................................................)..)............
>AE015929.1/268742-268639
AUAAAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUUACUUAUAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCAUCAUUUCAAUUUUAAAU
.............(..(............(..)..................................................)......).............
>ACLT01000088.1/50310-50211
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUCUUUUA
.............(..(.............(..)..................................................)..)............
>ABBV01000209.1/1887-1792
AUAAAUAAAUAUAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAGCAAUGUAAGUAACCUGCCUCCUUAGGUUGUCCAUUCUUUAUAAAAAAAUU
.............(..(.............(..)..............................................)..)............
>CP000485.1/3979564-3979464
UGGAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..).....................................................))............
>AE017198.1/275419-275520
GCUAAGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUGUAUGAUUUAUUCAUAUCAGUAACCUUCCCUCCUAGGAUGUCCCUCUUUCCUCUUAUUUUU
............(..(.............(..).................................................).).................
>CP001283.1/3985527-3985427
UGAAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..).....................................................))............
>AE017194.1/3941275-3941176
UGAAAGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
.............(..(.............(..)..................................................)..)............
>CP001083.1/2188308-2188208
UAGCUUUGAGAUAAAAACACGAUUCGGUUGGUAGUCCGAAUGGGGUAAUUAGCCCUCAGUAACCUGCCCUCCUGAGGUUGUCCAUUCUCUAAAUUUAGCUG
............(..(.............(..)................................................)...)...............
>CP001598.1/3993206-3993107
UGAAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..)....................................................))............
>CP000764.1/2923703-2923605
CUGUAGAAAUACAAAAACACAGUUCGGUUGGUAGUCCGGACGCAUACGAGUAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUGAAUCUUUU
.............(..(............(..)..............................................))..................
>AJ938182.1/408566-408666
AUAUAGAAGUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAGUUUUAAAACUGUCAGUAACCUUCCUCCUCGGGUCGUCCGUCAUUUCUAAUAAAACU
............(..(.............(..)................................................).).................
>AAVO02000014.1/31411-31532
AAUGACAAAGAUAAAAACGCAAAGCAUUUUAUUAUGCGAGAGCUGGUAGGUAGCCCAGCCGUCCUAUGUUUAUAGGGUAAGUAACCUGCCCCUCCGGGUUGUCCGUUCUUUGUUUGGAAAUA
.............(..(...............................(..).....................................................)..).............
>ABDQ01000001.1/474183-474288
UUCUAUAGAGAUAAAAACACAGUUUCGGUUGGUAGUCCGAACCUAUCUAAUUUAACGUUAGCAGUAACCUGCCCUCCUGGGGUUGUCCCUUCUCUAUGUUUUAGAU
.............(..(.............(..)........................................)..)............................
>CP001336.1/4011715-4011819
UAAAAAUAACAUAAAAACACGGUCCGGUUGGUAGUCCGGAUGCGUUGAAUUGACCGGUGUCGUAUCCUUCCCCCUCGGGAUGUUCGUUGUUAGCUUUAGCAUAUA
............(..(.............(..).................................................)..)...................
>CP001186.1/4127317-4127218
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..)..................................................)..)............
>CP000721.1/1839650-1839548
UAUUUAAGAGAUAAAAACACUGUUUCUGUUGGUAGUCAGAACCUAUAUUAUAAUAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUGUGAAUUUAUA
.............(..(.............(..).................................................)..)................
>AP006716.1/192943-193045
AUAGAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUGUAAUCAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCCUCAUUUCAAGUUAUAUA
............(..(.............(..).................................................)...)................
>AE015927.1/625938-626042
UUUAGUAGAGAUAAAAACACAGUUCGGUUGGUAGUCCGAACCUAUUUGAUUUUUAAAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAUGAUUAAAUU
............(..(.............(..)................................................))......................
>CP000726.1/2061998-2061898
UAGCUUUGAGAUAAAAACACGAUUCGGUUGGUAGUCCGAAUGGGGUAAUUAGCCCUCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAAAUUUAGCUG
............(..(.............(..)...................................................))...............
>AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
............(..(.............(..).................................................)).................
>CP000673.1/3572617-3572509
UAAAUUAGAGAUAAAAACACAGUUUUGGUUGGUAGUCCAAACCUGUCUAUAUUCUUAUAGAUGGAAGUAACCUUCCCUCCUGGGGUCGUCCCUUCUCUAUGUCAAAUUU
............(..(..............(..)............................................................)..)...........
>CP000413.1/273421-273525
CCUAAGGAAAGUAAAAACACGAUUCGGUUGGUAGUCCGAAUGUAUAAUUAUUAACUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAAAUUU
.............(..(............(..)...................................................).)..................
>AGMY01000008.1/65276-65178
GAUUUAUGAUAUAAAAACACGUUGCAGUUGGUAGUCUGCAAGCAUCAUGAUGAUGUCAGUAACCUUCCCUCCAGGUCGUCCUUUAUCAAAUUUUCUUUU
............(..(.............(..)..............................................).).................
>AP008230.1/2980037-2980137
AACAUGGAACAUAAAAACACGGUCCGGUUGGUAGUCCGGAUGCGCCGAAUUGACCGGUGUCGUAUCCUUCCCCCCUCGGGAUGUCCAUUGUUCAUUAUUUU
............(..(.............(..)..................................................).)...............
>AE001437.1/1718166-1718277
UUAUAAGAAGAUAAAAACACAGUUUGGUUGGUAGUCCAAACGCAUUUAUAUUCAUAUAAAAUAAAUGUCAGUAACCUGCCCUCGCGGGUUGUCCACUCUUCUUAAAAACUUA
............(..(.............(..).........................................................))....................
>CP000416.1/2190739-2190641
AGUGACAGAAUAAAAAACACGGUCUGGUUGGUAGUCCAGGCGCGGCUGAAAGCCGUCAGUAACCUGCCUCCUUGGUUGUCCCUAUUUUGUUAGUCAUUU
.............(..(............(..)...................................................)).............
>ABAX03000012.1/28997-29098
CAGCGCAAAGAUAAAAACACAGUCCCGGCCGGUAGUCCGGGCGCAGAGAUAAAAGCUGUCAGUAACCUGCCUCCUCGGUUGUCCAUUCUUUGCUGCCAAAAG
............(..(..............(..)............................................))......................
>CP000387.1/2058556-2058454
AGCUACUAAGAUAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAAAAAACCAUUUUUUGUCAGUAACCUUCCUCCUUGGUUGUCCAUUCUUAGGGAUUUUUA
.............(..(.............(..).................................................).).................
>AE017194.1/1016995-1017101
ACUUUAGAGUGAAAAAACACAGUUCGGUUGGUAGUCCGGACGCAAUAAUUAUUUAAUUAUUGUCAGUAACCUUCCCCCCUGGGAUGUCCAUCACUCAUGUAAUAAAC
............(..(.............(..)...................................................)....).................
>CP000560.1/2746219-2746117
UAAUGAGAAUGAAAAAACACAAUUCGGUUGGUAGUCCGGAUGCAUGAUUUAAAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUCAGUAAAUU
............(..(.............(..).................................................)..).................
>AL935263.2/1767846-1767748
AUUAGCGAAAUUAAAAACACGGUCUGGUCGGUAGUCCAGACGCAGCAACGGCUGUCAGUAACCUGCCUUCCUUGGUUGUCCGAAUUUCGUUAGUGAAAU
............(..(.............(..)...............................................)).................
>AL009126.3/1275756-1275858
GGUAAAGAAUGAAAAAACACGAUUCGGUUGGUAGUCCGGAUGCAUGAUUGAGAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUUAAUAUCUU
............(..(.............(..).................................................)..).................
>AAEK01000054.1/27482-27581
UGAAUGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
.............(..(.............(..)..................................................)..)............
>AM180355.1/2040488-2040585
AUCUAUAAAGAUAAAAACACAGUCUGGUUGGUAGUCCAGACGCAGCAAUAGCUGUCAGUAACCUGCCUCCUUGGUUGUCCGUUCUUUAGAAAGUAAUU
............(..(.............(..).............................................).).................
>CP000413.1/275566-275671
UCUAUGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUAUAUAAUCAUAUAGCUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAUUUUU
.............(..(............(..)....................................................).)..................
3 G(GU)A
A(AA(A))
(.CYCY.)
 32 66.7
>CP000764.1/2923703-2923605
CUGUAGAAAUACAAAAACACAGUUCGGUUGGUAGUCCGGACGCAUACGAGUAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUGAAUCUUUU
.............(..(............(..)..................................(....)......))..................
>ABBV01000209.1/1887-1792
AUAAAUAAAUAUAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAGCAAUGUAAGUAACCUGCCUCCUUAGGUUGUCCAUUCUUUAUAAAAAAAUU
.............(..(.............(..)............................(....)............)..)............
>CP000721.1/1839650-1839548
UAUUUAAGAGAUAAAAACACUGUUUCUGUUGGUAGUCAGAACCUAUAUUAUAAUAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUGUGAAUUUAUA
.............(..(.............(..)...................................(.....).......)..)................
>CP000673.1/3572617-3572509
UAAAUUAGAGAUAAAAACACAGUUUUGGUUGGUAGUCCAAACCUGUCUAUAUUCUUAUAGAUGGAAGUAACCUUCCCUCCUGGGGUCGUCCCUUCUCUAUGUCAAAUUU
............(..(..............(..).........................................(......)...........)..)...........
>ABAX03000012.1/28997-29098
CAGCGCAAAGAUAAAAACACAGUCCCGGCCGGUAGUCCGGGCGCAGAGAUAAAAGCUGUCAGUAACCUGCCUCCUCGGUUGUCCAUUCUUUGCUGCCAAAAG
............(..(..............(..)...................................(....)...))......................
>CP000485.1/3979564-3979464
UGGAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..)...................................(....)............))............
>AJ938182.1/408566-408666
AUAUAGAAGUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAGUUUUAAAACUGUCAGUAACCUUCCUCCUCGGGUCGUCCGUCAUUUCUAAUAAAACU
............(..(.............(..)..................................(.....).......).).................
>AP006716.1/192943-193045
AUAGAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUGUAAUCAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCCUCAUUUCAAGUUAUAUA
............(..(.............(..)...................................(.....).......)...)................
>CP001598.1/3993206-3993107
UGAAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..)..................................(....)............))............
>CP000903.1/4024493-4024394
UGAAAGAGAUACAAAAACACAGUUCUGGUCGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUAAUUUUUUU
.............(..(.............(..).................................(......).........)..)............
>AM180355.1/2040488-2040585
AUCUAUAAAGAUAAAAACACAGUCUGGUUGGUAGUCCAGACGCAGCAAUAGCUGUCAGUAACCUGCCUCCUUGGUUGUCCGUUCUUUAGAAAGUAAUU
............(..(.............(..)...............................(.....).......).).................
>AE015929.1/268742-268639
AUAAAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUUACUUAUAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCAUCAUUUCAAUUUUAAAU
.............(..(............(..)....................................(.....).......)......).............
>ABDT01000058.2/47084-46985
AUAAAAGGAGAUAAAAACACUAUUCUGUUGGUAGUCAGAAUCUAUUAUUUUAAUAGCAGUAACCUGCCCUCCUGGGUUGUCCGUUCUCUGGAAUUUUUUA
............(..(.............(..)................................(.....)............).).............
>AAEK01000054.1/27482-27581
UGAAUGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
.............(..(.............(..).................................(......).........)..)............
>CP000413.1/273421-273525
CCUAAGGAAAGUAAAAACACGAUUCGGUUGGUAGUCCGAAUGUAUAAUUAUUAACUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAAAUUU
.............(..(............(..).....................................(.......).....).)..................
>AE017194.1/1016995-1017101
ACUUUAGAGUGAAAAAACACAGUUCGGUUGGUAGUCCGGACGCAAUAAUUAUUUAAUUAUUGUCAGUAACCUUCCCCCCUGGGAUGUCCAUCACUCAUGUAAUAAAC
............(..(.............(..)..........................................(....)...)....).................
>AGMY01000008.1/65276-65178
GAUUUAUGAUAUAAAAACACGUUGCAGUUGGUAGUCUGCAAGCAUCAUGAUGAUGUCAGUAACCUUCCCUCCAGGUCGUCCUUUAUCAAAUUUUCUUUU
............(..(.............(..)..................................(....)......).).................
>CP001186.1/4127317-4127218
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..).................................(......).........)..)............
>CP000387.1/2058556-2058454
AGCUACUAAGAUAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAAAAAACCAUUUUUUGUCAGUAACCUUCCUCCUUGGUUGUCCAUUCUUAGGGAUUUUUA
.............(..(.............(..)...................................(......)......).).................
>AE015927.1/625938-626042
UUUAGUAGAGAUAAAAACACAGUUCGGUUGGUAGUCCGAACCUAUUUGAUUUUUAAAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAUGAUUAAAUU
............(..(.............(..)....................................(.....).....))......................
>AE017194.1/3941275-3941176
UGAAAGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
.............(..(.............(..).................................(......).........)..)............
>CP000560.1/2746219-2746117
UAAUGAGAAUGAAAAAACACAAUUCGGUUGGUAGUCCGGAUGCAUGAUUUAAAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUCAGUAAAUU
............(..(.............(..)....................................(.....)......)..).................
>CP001083.1/2188308-2188208
UAGCUUUGAGAUAAAAACACGAUUCGGUUGGUAGUCCGAAUGGGGUAAUUAGCCCUCAGUAACCUGCCCUCCUGAGGUUGUCCAUUCUCUAAAUUUAGCUG
.............(..(............(..)..........................(..........).........)...)................
>CP000413.1/275566-275671
UCUAUGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUAUAUAAUCAUAUAGCUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAUUUUU
.............(..(............(..)......................................(.......).....).)..................
>ACLT01000088.1/50310-50211
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUCUUUUA
.............(..(.............(..).................................(......).........)..)............
>CP001283.1/3985527-3985427
UGAAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..)...................................(....)............))............
>CP001336.1/4011715-4011819
UAAAAAUAACAUAAAAACACGGUCCGGUUGGUAGUCCGGAUGCGUUGAAUUGACCGGUGUCGUAUCCUUCCCCCUCGGGAUGUUCGUUGUUAGCUUUAGCAUAUA
............(..(.............(..)...................................(.....).......)..)...................
>AL009126.3/1275756-1275858
GGUAAAGAAUGAAAAAACACGAUUCGGUUGGUAGUCCGGAUGCAUGAUUGAGAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUUAAUAUCUU
............(..(.............(..)....................................(....).......)..).................
>CP000416.1/2190739-2190641
AGUGACAGAAUAAAAAACACGGUCUGGUUGGUAGUCCAGGCGCGGCUGAAAGCCGUCAGUAACCUGCCUCCUUGGUUGUCCCUAUUUUGUUAGUCAUUU
.............(..(............(..)................................(......)...........)).............
>AP008230.1/2980037-2980137
AACAUGGAACAUAAAAACACGGUCCGGUUGGUAGUCCGGAUGCGCCGAAUUGACCGGUGUCGUAUCCUUCCCCCCUCGGGAUGUCCAUUGUUCAUUAUUUU
............(..(.............(..)...................................(.......)......).)...............
>AE017198.1/275419-275520
GCUAAGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUGUAUGAUUUAUUCAUAUCAGUAACCUUCCCUCCUAGGAUGUCCCUCUUUCCUCUUAUUUUU
............(..(.............(..)..................................(......).......).).................
>AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
............(..(.............(..)...................................(.....).......)).................
4 G(GU)A
A(AA(A))
(.CYCY.)
A(NC(C))
 26 54.2
>CP000764.1/2923703-2923605
CUGUAGAAAUACAAAAACACAGUUCGGUUGGUAGUCCGGACGCAUACGAGUAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUGAAUCUUUU
.............(..(............(..)..........................(..(....(....)....))))..................
>AE015927.1/625938-626042
UUUAGUAGAGAUAAAAACACAGUUCGGUUGGUAGUCCGAACCUAUUUGAUUUUUAAAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAUGAUUAAAUU
.............(..(............(..)...............................(..(...(.....).....)).).)................
>CP000673.1/3572617-3572509
UAAAUUAGAGAUAAAAACACAGUUUUGGUUGGUAGUCCAAACCUGUCUAUAUUCUUAUAGAUGGAAGUAACCUUCCCUCCUGGGGUCGUCCCUUCUCUAUGUCAAAUUU
............(..(..............(..)..................................(..(...(......)....)).....)..)...........
>ABDT01000058.2/47084-46985
AUAAAAGGAGAUAAAAACACUAUUCUGUUGGUAGUCAGAAUCUAUUAUUUUAAUAGCAGUAACCUGCCCUCCUGGGUUGUCCGUUCUCUGGAAUUUUUUA
............(..(.............(..)...........................(..(.(.....)......))....).).............
>CP001598.1/3993206-3993107
UGAAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..)..........................(..(....(....)....))......))............
>AL009126.3/1275756-1275858
GGUAAAGAAUGAAAAAACACGAUUCGGUUGGUAGUCCGGAUGCAUGAUUGAGAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUUAAUAUCUU
...........(..(..............(..)............................(..(....(......)....)).).)................
>AE017194.1/3941275-3941176
UGAAAGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
.............(..(.............(..)..........................(..(...(......)...).)...)..)............
>CP000560.1/2746219-2746117
UAAUGAGAAUGAAAAAACACAAUUCGGUUGGUAGUCCGGAUGCAUGAUUUAAAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUCAGUAAAUU
...........(..(..............(..)............................(..(....(......)....)).).)................
>AAEK01000054.1/27482-27581
UGAAUGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
.............(..(.............(..)..........................(..(...(......)...).)...)..)............
>AE017198.1/275419-275520
GCUAAGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUGUAUGAUUUAUUCAUAUCAGUAACCUUCCCUCCUAGGAUGUCCCUCUUUCCUCUUAUUUUU
............(..(.............(..).............................(..(.(......).....))).).................
>ACLT01000088.1/50310-50211
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUCUUUUA
.............(..(.............(..)..........................(..(...(......)...).)...)..)............
>AGMY01000008.1/65276-65178
GAUUUAUGAUAUAAAAACACGUUGCAGUUGGUAGUCUGCAAGCAUCAUGAUGAUGUCAGUAACCUUCCCUCCAGGUCGUCCUUUAUCAAAUUUUCUUUU
............(..(.............(..)...........................(..(...(....)....))).).................
>ABBV01000209.1/1887-1792
AUAAAUAAAUAUAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAGCAAUGUAAGUAACCUGCCUCCUUAGGUUGUCCAUUCUUUAUAAAAAAAUU
.............(..(.............(..)......................(..(..(....)......))....)..)............
>AP006716.1/192943-193045
AUAGAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUGUAAUCAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCCUCAUUUCAAGUUAUAUA
.............(..(............(..)..............................(..(..(....)......))...)..).............
>AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
............(..(.............(..)............................(..(...(.....)....)).)).................
>CP000413.1/275566-275671
UCUAUGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUAUAUAAUCAUAUAGCUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAUUUUU
.............(..(............(..)..................................(..(.(.....).....))))..................
>AE017194.1/1016995-1017101
ACUUUAGAGUGAAAAAACACAGUUCGGUUGGUAGUCCGGACGCAAUAAUUAUUUAAUUAUUGUCAGUAACCUUCCCCCCUGGGAUGUCCAUCACUCAUGUAAUAAAC
...........(..(..............(..)..................................(..(....(....)....)).).)................
>CP001186.1/4127317-4127218
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..)..........................(..(...(......)...).)...)..)............
>CP001283.1/3985527-3985427
UGAAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..)..........................(..(.....(....)....))......))............
>CP000721.1/1839650-1839548
UAUUUAAGAGAUAAAAACACUGUUUCUGUUGGUAGUCAGAACCUAUAUUAUAAUAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUGUGAAUUUAUA
.............(..(.............(..)............................(..(...(.....).....)))..)................
>AJ938182.1/408566-408666
AUAUAGAAGUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAGUUUUAAAACUGUCAGUAACCUUCCUCCUCGGGUCGUCCGUCAUUUCUAAUAAAACU
............(..(.............(..)............................(..(..(.....)....)).).).................
>CP000485.1/3979564-3979464
UGGAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(.............(..)..........................(..(.....(....)....))......))............
>CP000416.1/2190739-2190641
AGUGACAGAAUAAAAAACACGGUCUGGUUGGUAGUCCAGGCGCGGCUGAAAGCCGUCAGUAACCUGCCUCCUUGGUUGUCCCUAUUUUGUUAGUCAUUU
.............(..(............(..)...........................(..(.(......)....)..)...)).............
>CP000413.1/273421-273525
CCUAAGGAAAGUAAAAACACGAUUCGGUUGGUAGUCCGAAUGUAUAAUUAUUAACUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAAAUUU
.............(..(............(..).................................(..(.(.....).....))))..................
>CP000903.1/4024493-4024394
UGAAAGAGAUACAAAAACACAGUUCUGGUCGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUAAUUUUUUU
.............(..(.............(..)..........................(..(...(......)...).)...)..)............
>AE015929.1/268742-268639
AUAAAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUUACUUAUAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCAUCAUUUCAAUUUUAAAU
.............(..(............(..)...............................(..(..(....)......))...)..).............
5 G(GU)A
A(AA(A))
(.CYCY.)
A(NC(C))
(()(N)C)A
 18 37.5
>CP000416.1/2190739-2190641
AGUGACAGAAUAAAAAACACGGUCUGGUUGGUAGUCCAGGCGCGGCUGAAAGCCGUCAGUAACCUGCCUCCUUGGUUGUCCCUAUUUUGUUAGUCAUUU
.............(..(...((.......(..).......)(.............).)..(..(.(......)....)..)...)).............
>CP000764.1/2923703-2923605
CUGUAGAAAUACAAAAACACAGUUCGGUUGGUAGUCCGGACGCAUACGAGUAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUGAAUCUUUU
.............(..(...((.......(..).......)(............).)..(..(....(....)....))))..................
>CP000560.1/2746219-2746117
UAAUGAGAAUGAAAAAACACAAUUCGGUUGGUAGUCCGGAUGCAUGAUUUAAAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUCAGUAAAUU
...........(..(....(.(.......(..).......)(..............).)..(..(....(......)....)).).)................
>CP000903.1/4024493-4024394
UGAAAGAGAUACAAAAACACAGUUCUGGUCGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUAAUUUUUUU
.............(..(....((.......(..).......)(............).)..(..(...(......)...).)...)..)............
>ACLT01000088.1/50310-50211
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUCUUUUA
.............(..(....((.......(..).......)(............).)..(..(...(......)...).)...)..)............
>CP000413.1/273421-273525
CCUAAGGAAAGUAAAAACACGAUUCGGUUGGUAGUCCGAAUGUAUAAUUAUUAACUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAAAUUU
.............(..(...((.......(..).......)(...................).)..(..(.(.....).....))))..................
>AP006716.1/192943-193045
AUAGAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUGUAAUCAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCCUCAUUUCAAGUUAUAUA
.............(..(...((.......(..).......)(................).)..(..(..(....)......))...)..).............
>AE017198.1/275419-275520
GCUAAGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUGUAUGAUUUAUUCAUAUCAGUAACCUUCCCUCCUAGGAUGUCCCUCUUUCCUCUUAUUUUU
............(..(....((.......(..).......)(...............).)..(..(.(......).....))).).................
>AJ938182.1/408566-408666
AUAUAGAAGUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAGUUUUAAAACUGUCAGUAACCUUCCUCCUCGGGUCGUCCGUCAUUUCUAAUAAAACU
............(..(....((.......(..).......)(..............).)..(..(..(.....)....)).).).................
>AE015929.1/268742-268639
AUAAAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUUACUUAUAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCAUCAUUUCAAUUUUAAAU
.............(..(...((.......(..).......)..(...............).)..(..(..(....)......))...)..).............
>AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
............(..(....((.......(..).......)(..............).)..(..(...(.....)....)).)).................
>AGMY01000008.1/65276-65178
GAUUUAUGAUAUAAAAACACGUUGCAGUUGGUAGUCUGCAAGCAUCAUGAUGAUGUCAGUAACCUUCCCUCCAGGUCGUCCUUUAUCAAAUUUUCUUUU
............(..(....((.......(..).......)(.............).)..(..(...(....)....))).).................
>AAEK01000054.1/27482-27581
UGAAUGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
.............(..(....((.......(..).......)(............).)..(..(...(......)...).)...)..)............
>AE017194.1/3941275-3941176
UGAAAGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
.............(..(....((.......(..).......)(............).)..(..(...(......)...).)...)..)............
>CP001186.1/4127317-4127218
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
.............(..(....((.......(..).......)(............).)..(..(...(......)...).)...)..)............
>AE015927.1/625938-626042
UUUAGUAGAGAUAAAAACACAGUUCGGUUGGUAGUCCGAACCUAUUUGAUUUUUAAAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAUGAUUAAAUU
.............(..(...((.......(..).......)(.................).)..(..(...(.....).....)).).)................
>ABDT01000058.2/47084-46985
AUAAAAGGAGAUAAAAACACUAUUCUGUUGGUAGUCAGAAUCUAUUAUUUUAAUAGCAGUAACCUGCCCUCCUGGGUUGUCCGUUCUCUGGAAUUUUUUA
............(..(....((.......(..).......)(.............).)..(..(.(.....)......))....).).............
>AL009126.3/1275756-1275858
GGUAAAGAAUGAAAAAACACGAUUCGGUUGGUAGUCCGGAUGCAUGAUUGAGAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUUAAUAUCUU
...........(..(...(..(.......(..).......)(..............).)..(..(....(......)....)).).)................

>AE015927.1/625938-626042
UUUAGUAGAGAUAAAAACACAGUUCGGUUGGUAGUCCGAACCUAUUUGAUUUUUAAAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAUGAUUAAAUU
.............................(..)........................................................................
............(..(.............(..)................................................))......................
............(..(.............(..)....................................(.....).....))......................
.............(..(............(..)...............................(..(...(.....).....)).).)................
.............(..(...((.......(..).......)(.................).)..(..(...(.....).....)).).)................
>CP000413.1/273421-273525
CCUAAGGAAAGUAAAAACACGAUUCGGUUGGUAGUCCGAAUGUAUAAUUAUUAACUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAAAUUU
.............................(..)........................................................................
.............(..(............(..)...................................................).)..................
.............(..(............(..).....................................(.......).....).)..................
.............(..(............(..).................................(..(.(.....).....))))..................
.............(..(...((.......(..).......)(...................).)..(..(.(.....).....))))..................
>AP006716.1/192943-193045
AUAGAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUGUAAUCAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCCUCAUUUCAAGUUAUAUA
.............................(..)......................................................................
............(..(.............(..).................................................)...)................
............(..(.............(..)...................................(.....).......)...)................
.............(..(............(..)..............................(..(..(....)......))...)..).............
.............(..(...((.......(..).......)(................).)..(..(..(....)......))...)..).............
>CP000764.1/2923703-2923605
CUGUAGAAAUACAAAAACACAGUUCGGUUGGUAGUCCGGACGCAUACGAGUAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUGAAUCUUUU
.............................(..)..................................................................
.............(..(............(..)..............................................))..................
.............(..(............(..)..................................(....)......))..................
.............(..(............(..)..........................(..(....(....)....))))..................
.............(..(...((.......(..).......)(............).)..(..(....(....)....))))..................
>CP000416.1/2190739-2190641
AGUGACAGAAUAAAAAACACGGUCUGGUUGGUAGUCCAGGCGCGGCUGAAAGCCGUCAGUAACCUGCCUCCUUGGUUGUCCCUAUUUUGUUAGUCAUUU
.............................(..)..................................................................
.............(..(............(..)...................................................)).............
.............(..(............(..)................................(......)...........)).............
.............(..(............(..)...........................(..(.(......)....)..)...)).............
.............(..(...((.......(..).......)(.............).)..(..(.(......)....)..)...)).............
>ABDT01000058.2/47084-46985
AUAAAAGGAGAUAAAAACACUAUUCUGUUGGUAGUCAGAAUCUAUUAUUUUAAUAGCAGUAACCUGCCCUCCUGGGUUGUCCGUUCUCUGGAAUUUUUUA
.............................(..)...................................................................
............(..(.............(..)...................................................).).............
............(..(.............(..)................................(.....)............).).............
............(..(.............(..)...........................(..(.(.....)......))....).).............
............(..(....((.......(..).......)(.............).)..(..(.(.....)......))....).).............
>AAEK01000054.1/27482-27581
UGAAUGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
..............................(..)..................................................................
.............(..(.............(..)..................................................)..)............
.............(..(.............(..).................................(......).........)..)............
.............(..(.............(..)..........................(..(...(......)...).)...)..)............
.............(..(....((.......(..).......)(............).)..(..(...(......)...).)...)..)............
>CP000903.1/4024493-4024394
UGAAAGAGAUACAAAAACACAGUUCUGGUCGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCAGUAUUUCUAAUUUUUUU
..............................(..)..................................................................
.............(..(.............(..)..................................................)..)............
.............(..(.............(..).................................(......).........)..)............
.............(..(.............(..)..........................(..(...(......)...).)...)..)............
.............(..(....((.......(..).......)(............).)..(..(...(......)...).)...)..)............
>ACLT01000088.1/50310-50211
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUCUUUUA
..............................(..)..................................................................
.............(..(.............(..)..................................................)..)............
.............(..(.............(..).................................(......).........)..)............
.............(..(.............(..)..........................(..(...(......)...).)...)..)............
.............(..(....((.......(..).......)(............).)..(..(...(......)...).)...)..)............
>AE015929.1/268742-268639
AUAAAGAAAUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAAAUUACUUAUAUUUGUCAGUAACCUUCCUCCUCAGGUCGUCCAUCAUUUCAAUUUUAAAU
.............................(..).......................................................................
.............(..(............(..)..................................................)......).............
.............(..(............(..)....................................(.....).......)......).............
.............(..(............(..)...............................(..(..(....)......))...)..).............
.............(..(...((.......(..).......)..(...............).)..(..(..(....)......))...)..).............
>AE017198.1/275419-275520
GCUAAGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUGUAUGAUUUAUUCAUAUCAGUAACCUUCCCUCCUAGGAUGUCCCUCUUUCCUCUUAUUUUU
.............................(..).....................................................................
............(..(.............(..).................................................).).................
............(..(.............(..)..................................(......).......).).................
............(..(.............(..).............................(..(.(......).....))).).................
............(..(....((.......(..).......)(...............).)..(..(.(......).....))).).................
>CP001186.1/4127317-4127218
UGAAAGAAAUACAAAAACACAGCUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
..............................(..)..................................................................
.............(..(.............(..)..................................................)..)............
.............(..(.............(..).................................(......).........)..)............
.............(..(.............(..)..........................(..(...(......)...).)...)..)............
.............(..(....((.......(..).......)(............).)..(..(...(......)...).)...)..)............
>CP000560.1/2746219-2746117
UAAUGAGAAUGAAAAAACACAAUUCGGUUGGUAGUCCGGAUGCAUGAUUUAAAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUCAGUAAAUU
.............................(..)......................................................................
............(..(.............(..).................................................)..).................
............(..(.............(..)....................................(.....)......)..).................
...........(..(..............(..)............................(..(....(......)....)).).)................
...........(..(....(.(.......(..).......)(..............).)..(..(....(......)....)).).)................
>AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
.............................(..)....................................................................
............(..(.............(..).................................................)).................
............(..(.............(..)...................................(.....).......)).................
............(..(.............(..)............................(..(...(.....)....)).)).................
............(..(....((.......(..).......)(..............).)..(..(...(.....)....)).)).................
>AJ938182.1/408566-408666
AUAUAGAAGUGUAAAAACACAAUUGGGUUGGUAGUCCCAAUGCAGUUUUAAAACUGUCAGUAACCUUCCUCCUCGGGUCGUCCGUCAUUUCUAAUAAAACU
.............................(..)....................................................................
............(..(.............(..)................................................).).................
............(..(.............(..)..................................(.....).......).).................
............(..(.............(..)............................(..(..(.....)....)).).).................
............(..(....((.......(..).......)(..............).)..(..(..(.....)....)).).).................
>AL009126.3/1275756-1275858
GGUAAAGAAUGAAAAAACACGAUUCGGUUGGUAGUCCGGAUGCAUGAUUGAGAAUGUCAGUAACCUUCCCCUCCUCGGGAUGUCCAUCAUUCUUUAAUAUCUU
.............................(..)......................................................................
............(..(.............(..).................................................)..).................
............(..(.............(..)....................................(....).......)..).................
...........(..(..............(..)............................(..(....(......)....)).).)................
...........(..(...(..(.......(..).......)(..............).)..(..(....(......)....)).).)................
>AE017194.1/3941275-3941176
UGAAAGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUU
..............................(..)..................................................................
.............(..(.............(..)..................................................)..)............
.............(..(.............(..).................................(......).........)..)............
.............(..(.............(..)..........................(..(...(......)...).)...)..)............
.............(..(....((.......(..).......)(............).)..(..(...(......)...).)...)..)............
>AGMY01000008.1/65276-65178
GAUUUAUGAUAUAAAAACACGUUGCAGUUGGUAGUCUGCAAGCAUCAUGAUGAUGUCAGUAACCUUCCCUCCAGGUCGUCCUUUAUCAAAUUUUCUUUU
.............................(..)..................................................................
............(..(.............(..)..............................................).).................
............(..(.............(..)..................................(....)......).).................
............(..(.............(..)...........................(..(...(....)....))).).................
............(..(....((.......(..).......)(.............).)..(..(...(....)....))).).................
>CP000485.1/3979564-3979464
UGGAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
..............................(..)...................................................................
.............(..(.............(..).....................................................))............
.............(..(.............(..)...................................(....)............))............
.............(..(.............(..)..........................(..(.....(....)....))......))............
>CP001598.1/3993206-3993107
UGAAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
..............................(..)..................................................................
.............(..(.............(..)....................................................))............
.............(..(.............(..)..................................(....)............))............
.............(..(.............(..)..........................(..(....(....)....))......))............
>CP000413.1/275566-275671
UCUAUGGAAAGUAAAAACACAAUUCGGUUGGUAGUCCGAAUAUAUAAUCAUAUAGCUUUAUAUCAGUAACCUUCCUCCUAGGAUGUCCAUCUUUCCUAAUAUUUUU
.............................(..).........................................................................
.............(..(............(..)....................................................).)..................
.............(..(............(..)......................................(.......).....).)..................
.............(..(............(..)..................................(..(.(.....).....))))..................
>CP001283.1/3985527-3985427
UGAAAGAAAUACAAAAACACAGUACUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCCUCCGGGAUGUCCCGUAUUUCUAAUUUUUUA
..............................(..)...................................................................
.............(..(.............(..).....................................................))............
.............(..(.............(..)...................................(....)............))............
.............(..(.............(..)..........................(..(.....(....)....))......))............
>CP000721.1/1839650-1839548
UAUUUAAGAGAUAAAAACACUGUUUCUGUUGGUAGUCAGAACCUAUAUUAUAAUAUAGCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUGUGAAUUUAUA
..............................(..).....................................................................
.............(..(.............(..).................................................)..)................
.............(..(.............(..)...................................(.....).......)..)................
.............(..(.............(..)............................(..(...(.....).....)))..)................
>CP000673.1/3572617-3572509
UAAAUUAGAGAUAAAAACACAGUUUUGGUUGGUAGUCCAAACCUGUCUAUAUUCUUAUAGAUGGAAGUAACCUUCCCUCCUGGGGUCGUCCCUUCUCUAUGUCAAAUUU
..............................(..)...........................................................................
............(..(..............(..)............................................................)..)...........
............(..(..............(..).........................................(......)...........)..)...........
............(..(..............(..)..................................(..(...(......)....)).....)..)...........
>ABBV01000209.1/1887-1792
AUAAAUAAAUAUAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAGCAAUGUAAGUAACCUGCCUCCUUAGGUUGUCCAUUCUUUAUAAAAAAAUU
..............................(..)..............................................................
.............(..(.............(..)..............................................)..)............
.............(..(.............(..)............................(....)............)..)............
.............(..(.............(..)......................(..(..(....)......))....)..)............
>AE017194.1/1016995-1017101
ACUUUAGAGUGAAAAAACACAGUUCGGUUGGUAGUCCGGACGCAAUAAUUAUUUAAUUAUUGUCAGUAACCUUCCCCCCUGGGAUGUCCAUCACUCAUGUAAUAAAC
.............................(..)..........................................................................
............(..(.............(..)...................................................)....).................
............(..(.............(..)..........................................(....)...)....).................
...........(..(..............(..)..................................(..(....(....)....)).).)................
>ABAX03000012.1/28997-29098
CAGCGCAAAGAUAAAAACACAGUCCCGGCCGGUAGUCCGGGCGCAGAGAUAAAAGCUGUCAGUAACCUGCCUCCUCGGUUGUCCAUUCUUUGCUGCCAAAAG
..............................(..)....................................................................
............(..(..............(..)............................................))......................
............(..(..............(..)...................................(....)...))......................
>CP001336.1/4011715-4011819
UAAAAAUAACAUAAAAACACGGUCCGGUUGGUAGUCCGGAUGCGUUGAAUUGACCGGUGUCGUAUCCUUCCCCCUCGGGAUGUUCGUUGUUAGCUUUAGCAUAUA
.............................(..)........................................................................
............(..(.............(..).................................................)..)...................
............(..(.............(..)...................................(.....).......)..)...................
>AP008230.1/2980037-2980137
AACAUGGAACAUAAAAACACGGUCCGGUUGGUAGUCCGGAUGCGCCGAAUUGACCGGUGUCGUAUCCUUCCCCCCUCGGGAUGUCCAUUGUUCAUUAUUUU
.............................(..)....................................................................
............(..(.............(..)..................................................).)...............
............(..(.............(..)...................................(.......)......).)...............
>CP001083.1/2188308-2188208
UAGCUUUGAGAUAAAAACACGAUUCGGUUGGUAGUCCGAAUGGGGUAAUUAGCCCUCAGUAACCUGCCCUCCUGAGGUUGUCCAUUCUCUAAAUUUAGCUG
.............................(..)....................................................................
............(..(.............(..)................................................)...)...............
.............(..(............(..)..........................(..........).........)...)................
>CP000387.1/2058556-2058454
AGCUACUAAGAUAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAAAAAACCAUUUUUUGUCAGUAACCUUCCUCCUUGGUUGUCCAUUCUUAGGGAUUUUUA
..............................(..).....................................................................
.............(..(.............(..).................................................).).................
.............(..(.............(..)...................................(......)......).).................
>AM180355.1/2040488-2040585
AUCUAUAAAGAUAAAAACACAGUCUGGUUGGUAGUCCAGACGCAGCAAUAGCUGUCAGUAACCUGCCUCCUUGGUUGUCCGUUCUUUAGAAAGUAAUU
.............................(..).................................................................
............(..(.............(..).............................................).).................
............(..(.............(..)...............................(.....).......).).................
>ABDQ01000001.1/474183-474288
UUCUAUAGAGAUAAAAACACAGUUUCGGUUGGUAGUCCGAACCUAUCUAAUUUAACGUUAGCAGUAACCUGCCCUCCUGGGGUUGUCCCUUCUCUAUGUUUUAGAU
..............................(..)........................................................................
.............(..(.............(..)........................................)..)............................
>AAVO02000014.1/31411-31532
AAUGACAAAGAUAAAAACGCAAAGCAUUUUAUUAUGCGAGAGCUGGUAGGUAGCCCAGCCGUCCUAUGUUUAUAGGGUAAGUAACCUGCCCCUCCGGGUUGUCCGUUCUUUGUUUGGAAAUA
................................................(..)......................................................................
.............(..(...............................(..).....................................................)..).............
>AL935263.2/1767846-1767748
AUUAGCGAAAUUAAAAACACGGUCUGGUCGGUAGUCCAGACGCAGCAACGGCUGUCAGUAACCUGCCUUCCUUGGUUGUCCGAAUUUCGUUAGUGAAAU
.............................(..)..................................................................
............(..(.............(..)...............................................)).................
>AE001437.1/1718166-1718277
UUAUAAGAAGAUAAAAACACAGUUUGGUUGGUAGUCCAAACGCAUUUAUAUUCAUAUAAAAUAAAUGUCAGUAACCUGCCCUCGCGGGUUGUCCACUCUUCUUAAAAACUUA
.............................(..)...............................................................................
............(..(.............(..).........................................................))....................
>CP000726.1/2061998-2061898
UAGCUUUGAGAUAAAAACACGAUUCGGUUGGUAGUCCGAAUGGGGUAAUUAGCCCUCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAAAUUUAGCUG
.............................(..)....................................................................
............(..(.............(..)...................................................))...............
>AAYW02000008.1/106021-105897
AAAAGUAAAGAUAAAAACGCAACGUAUGCAGUGAUGCAUACCAGAGCCGGUAGGUAGCCCGGCCGUCCUGCAUAUUAGGGUAAGUAACCUGCCCCUCCGGGUUGUCCAUUCUUUGCUCAUUUCAA
....................................................(..).....................................................................
>CP001176.1/4159074-4158975
UGAAAGAAAUACAAAAACACAGUUCUGGUUGGUAGUCCAGACGCAUGAUUUCAUGUCAGUAACCUUCCCCUCCGGGAUGUCCCGUAUUUCUAAUCUUUUA
..............................(..)..................................................................
>CP000728.1/2191605-2191505
UAGCUUCGAGAUAAAAACACGAUUCGGUUGGUAGUCCGAAUGGGGUAAUUAGCCCUCAGUAACCUGCCCUCCUGGGGUUGUCCAUUCUCUAAAUUUAGCUG
.............................(..)....................................................................
>CP000423.1/2847352-2847256
CAUUGCGCUAUCAAAAACACAGUCUGGUUGGUAGUCCAGACGCGGCUUAGGCUGUCAGUAUCCUUCCUCCUUGGAUGUCCAGAUUGCGUGAAAAUCU
.............................(..)................................................................
>CP000114.1/99777-99875
UCGUUAUAGCAUAAAAACACGUUGCAGUUGGUAGUCUGCAAGCGUUCAGUGAACGUCAGUAACCUUCCCUCCAGGUCGUCCAUUGCAAUUUAAUAUUUA
.............................(..)..................................................................
>ABGC03000029.1/55866-55990
AAACGCAAAGAUAAAAACGCAACGUACAUCUUUGAUGUGCCAGAGCCGGUAGGUAGCCCGGCCGUCCUAUAUAAAUAGGGUAAGUAACCUGCCCCUCCGGGUUGUCCAUUCUUUGUUCAAUCAAU
...................................................(..)......................................................................
>CP000024.1/228896-229023
CCCAACUAAGAUAAAAACACAGUUCUGGUUGGUAAGUCCAGACACGUAGGCGAGCCUAUCAGUAACCUAAGGAUAUGAAUAGAAAUGAAGAGUAGUCCAUCAAGGCUACUCUUUUUCGUCAAAAGAAC
..............................(..)..............................................................................................
>ABED02000029.1/585317-585449
UAAAAGCAGGAUAAAAACGCAACGCAUUUCUUCCUGAGAGAUGCUAGAGCUGGUAGGUAGCCCAGCCGUCUGCACCGCACGGUGUAGGUAAGUAACCUUCCCCUCCGGGUUGUCCAUUCCUGUAAGGAUUUAU
.......................................................(..)..........................................................................
>ABCC02000044.1/34328-34178
AAAAGCAAAGAUAAAAACACAACGCAGGAUAAAAACCUGCAGAGCUGGUAGGUAGUCCAGCCGCAUUCCUAUAGUCCUGCUUUAACUGGCGGGGAGACAGGGAUGUCAGUAACCCUCCCUCCUUGGGUCGUCCAUUCUUUGUUCAUCACAU
..................................................(..).................................................................................................
>AARF01000365.1/613-724
GAAGUGGAGUGUAAAAACACAGUCUGGUUGGUAGUCCUAGACACACGUCGUCAUGACCAAAGACGUGUCAGUAACCUUCCCCCUCGGGAUGUCCCUCACUACGGGAACUUCA
.............................(..)...............................................................................

ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio
1 G(GU)A < 0.001 68.4
AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
...................................................................................................1.
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
2 A(AA(A)) < 0.001 4.12
AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
...................................................................................................1.
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
3 (.CYCY.) < 0.001 17.9
AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
...................................................................................................1.
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
4 (()(N)C)A < 0.001 3.9
AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
...................................................................................................1.
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
5 A(NC(C)) < 0.001 7.69
AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
...................................................................................................1.
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio

NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio
1 G(GU)A < 0.001 68.4
AAPZ02000001.1/582696-582796
ACCUUAGAAAGUAAAAACACAGUUCGGUUGGUAGUCCGGACAUCAGUUCAAGCUGAUCAGUAUCCUUCCUCUCCGGGAUGUCCCUCUUUCAUAAUUUAUUU
...................................................................................................1.
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).