D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major
D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences
J. Mol. Biol., 435 (2023)

Hammerhead ribozyme HH9   (Rfam: RF02275)

Seed sequences
All NCMs (CSV file) (all) positive sequences (all) negative sequences (random) (training) positive sequences (training) negative sequences (testing) positive sequences (testing) negative sequences 

Options
Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN
Rfam
D-ORB
Augmented
(UGA()())
(.AANAA.)
U(RC(C))
(GA()GA)
((C)N)G
N(RNN)A
((G)G)U
(A()U)
(().NNRR.)
100.0
96.9
100.0
96.9
100.0
100.0
100.0
100.0
90.6
(UGA()())
(.AANAA.)
U(RC(C))
(GA()GA)
N(RNN)A
(().NNRR.)

% of positive sequence with ORB





Deep neural network:

5-fold cross-validation: 99.8 %
(± 0.121 %)
Decision tree:

5-fold cross-validation: 98.2 %
(± 3.46 %)
D-ORB structure
D-ORB structure decision tree:

5-fold cross-validation: 96.4 %
(± 3.77 %)
of AAGU03018532.1/57571-57497
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
(.((((((((..((((.((...(..((((......))))..)(.((...)).))).))))))).)))).....))
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345

abstract shape: (()())

Number of sequences
Structure ORBs (out of 32) (%)
1 (UGA()())
 31 96.9
>AFEY01454121.1/10166-10232
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
>AADN03002802.1/91438-91372
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUG
................(...(..................)(.........))...............
>AAHX01036414.1/22499-22433
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
>AAPN01231077.1/15198-15121
UCCUGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAACCAGGUCCUGCAGUACUGGCGAAAGGAGCUU
..................(...(..................)(.........))........................
>AAQQ01544543.1/2644-2721
UAGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUUAAGACGGUA
..................(...(..................)(.........))........................
>ACTA01058962.1/24761-24837
AUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAUA
..................(...(..................)(.........)).......................
>AALT01643156.1/444-367
UCCAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACGAGGUCCUGCAGUACGGGCUUAGGGGAGCA
..................(...(..................)(.........))........................
>ABRN01375670.1/21703-21777
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUGAGAUA
..................(...(..................)(.........)).....................
>AEYP01022184.1/5895-5972
GUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUGGAA
..................(...(..................)(.........))........................
>ABRQ01056532.1/2019-2096
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAACAGGUCCUGCAGUACUGGCUUAAGAUAGUG
..................(...(..................)(.........))........................
>AAWR02025218.1/31065-31139
CCGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGGUUAGGUCCUGCAGUACUGGCUUAAGAUA
..................(...(..................)(.........)).....................
>ABQF01023900.1/7348-7414
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUA
................(...(..................)(.........))...............
>AAQR03161315.1/4048-3972
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAGAAU
..................(...(..................)(.........)).......................
>AANN01066007.1/588-511
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGCUAGGUCCUGCAGUACUGGCUUAAGAGGCUA
..................(...(..................)(.........))........................
>AL773539.18/161561-161627
UGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
>AAKN02030441.1/10428-10505
UUGGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACUAGGUCCUGCAGUACUGGCUUAAGAUAAUG
..................(...(..................)(.........))........................
>ABRP01270906.1/1966-2043
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAAUA
..................(...(..................)(.........))........................
>AFYH01089550.1/2099-2023
CAAGCAAGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUUAUAGGUCCUGUAGUACUGGCUUGUUACCAU
..................(...(..................)(.........)).......................
>AADN03003451.1/4511-4593
CUGGGCCGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUUGUAAAAUAGGUCCUGUAGUAUUGGCCUGAUGAGCUC
..................(...(..................).(............).)........................
>AAIY01498693.1/2014-1937
CCGAGCCGUUGCCUGCAGCUGAUGAGCUCCAACAAGAGCGAAACCGAACAGGUCCUGCAGUACGGGUGGGGUCAGCAG
..................(...(..................)(.........))........................
>AEKR01154328.1/10424-10501
UCUGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUUACCAUAGUA
..................(...(..................)(.........))........................
>AFTD01093388.1/13316-13239
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUUAUGACAGUA
..................(...(..................)(.........))........................
>ABQO010129822.1/1187-1253
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAUAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
>ABQF01059171.1/305-384
UUGGGCCGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUGCUAAGCAAGGUCCUGUAGUAUUGGCCUGAACCC
..................(...(..................)..(..........)).......................
>ADDD01012933.1/19585-19662
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUGAAAUCUUUC
..................(...(..................)(.........))........................
>AGTP01043633.1/33547-33613
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
>AGCE01141575.1/4443-4377
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
>AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
..................(...(..................)(.........)).....................
>AAFR03027197.1/99742-99816
UUAGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUUUAGCAU
..................(...(..................)(.........)).....................
>AAWZ02032198.1/15823-15741
UGAGGCCGUUACCUACAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAAAAUAGGUCCUGUAGUAUUGGCCGACUGAGCCG
..................(...(..................).(............).)........................
>AGAI01055016.1/63287-63205
UUAGGCCGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUUUUAAGAUAGGUCCUGUAGUAUUGGCCUGAAAACCAU
..................(...(..................).(............).)........................
2 (UGA()())
(.AANAA.)
 28 87.5
>AAHX01036414.1/22499-22433
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUU
................(...(.....(......).....)(.........))...............
>AEKR01154328.1/10424-10501
UCUGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUUACCAUAGUA
..................(...(.....(......).....)(.........))........................
>AFYH01089550.1/2099-2023
CAAGCAAGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUUAUAGGUCCUGUAGUACUGGCUUGUUACCAU
..................(...(.....(......).....)(.........)).......................
>AFTD01093388.1/13316-13239
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUUAUGACAGUA
..................(...(.....(......).....)(.........))........................
>AADN03002802.1/91438-91372
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUG
................(...(.....(......).....)(.........))...............
>ABQO010129822.1/1187-1253
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAUAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
................(...(.....(......).....)(.........))...............
>AAFR03027197.1/99742-99816
UUAGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUUUAGCAU
..................(...(.....(......).....)(.........)).....................
>ABRP01270906.1/1966-2043
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAAUA
..................(...(.....(......).....)(.........))........................
>ABRN01375670.1/21703-21777
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUGAGAUA
..................(...(.....(......).....)(.........)).....................
>AEYP01022184.1/5895-5972
GUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUGGAA
..................(...(.....(......).....)(.........))........................
>AGTP01043633.1/33547-33613
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUU
................(...(.....(......).....)(.........))...............
>AGCE01141575.1/4443-4377
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUU
................(...(.....(......).....)(.........))...............
>AAPN01231077.1/15198-15121
UCCUGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAACCAGGUCCUGCAGUACUGGCGAAAGGAGCUU
..................(...(.....(......).....)(.........))........................
>ABQF01023900.1/7348-7414
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUA
................(...(.....(......).....)(.........))...............
>ABQF01059171.1/305-384
UUGGGCCGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUGCUAAGCAAGGUCCUGUAGUAUUGGCCUGAACCC
..................(...(.....(......).....)..(..........)).......................
>AAQR03161315.1/4048-3972
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAGAAU
..................(...(.....(......).....)(.........)).......................
>AAWR02025218.1/31065-31139
CCGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGGUUAGGUCCUGCAGUACUGGCUUAAGAUA
..................(...(.....(......).....)(.........)).....................
>AAKN02030441.1/10428-10505
UUGGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACUAGGUCCUGCAGUACUGGCUUAAGAUAAUG
..................(...(.....(......).....)(.........))........................
>ADDD01012933.1/19585-19662
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUGAAAUCUUUC
..................(...(.....(......).....)(.........))........................
>AFEY01454121.1/10166-10232
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
................(...(.....(......).....)(.........))...............
>ABRQ01056532.1/2019-2096
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAACAGGUCCUGCAGUACUGGCUUAAGAUAGUG
..................(...(.....(......).....)(.........))........................
>AANN01066007.1/588-511
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGCUAGGUCCUGCAGUACUGGCUUAAGAGGCUA
..................(...(.....(......).....)(.........))........................
>AL773539.18/161561-161627
UGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUU
................(...(.....(......).....)(.........))...............
>AAQQ01544543.1/2644-2721
UAGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUUAAGACGGUA
..................(...(.....(......).....)(.........))........................
>AAIY01498693.1/2014-1937
CCGAGCCGUUGCCUGCAGCUGAUGAGCUCCAACAAGAGCGAAACCGAACAGGUCCUGCAGUACGGGUGGGGUCAGCAG
..................(...(.....(......).....)(.........))........................
>ACTA01058962.1/24761-24837
AUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAUA
..................(...(.....(......).....)(.........)).......................
>AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
..................(...(.....(......).....)(.........)).....................
>AALT01643156.1/444-367
UCCAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACGAGGUCCUGCAGUACGGGCUUAGGGGAGCA
..................(...(.....(......).....)(.........))........................
3 (UGA()())
(.AANAA.)
U(RC(C))
 27 84.4
>AEKR01154328.1/10424-10501
UCUGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUUACCAUAGUA
.........(..(.....(...(.....(......).....)(.........)).....)).................
>AALT01643156.1/444-367
UCCAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACGAGGUCCUGCAGUACGGGCUUAGGGGAGCA
.........(..(.....(...(.....(......).....)(.........)).....)).................
>AAQQ01544543.1/2644-2721
UAGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUUAAGACGGUA
.........(..(.....(...(.....(......).....)(.........)).....)).................
>AAFR03027197.1/99742-99816
UUAGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUUUAGCAU
.........(..(.....(...(.....(......).....)(.........)).....))..............
>AEYP01022184.1/5895-5972
GUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUGGAA
.........(..(.....(...(.....(......).....)(.........)).....)).................
>AAQR03161315.1/4048-3972
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAGAAU
.........(..(.....(...(.....(......).....)(.........)).....))................
>ABRP01270906.1/1966-2043
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAAUA
.........(..(.....(...(.....(......).....)(.........)).....)).................
>ABRQ01056532.1/2019-2096
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAACAGGUCCUGCAGUACUGGCUUAAGAUAGUG
.........(..(.....(...(.....(......).....)(.........)).....)).................
>AAPN01231077.1/15198-15121
UCCUGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAACCAGGUCCUGCAGUACUGGCGAAAGGAGCUU
.........(..(.....(...(.....(......).....)(.........)).....)).................
>AAHX01036414.1/22499-22433
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUU
.......(..(.....(...(.....(......).....)(.........)).....))........
>AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........(..(.....(...(.....(......).....)(.........)).....))..............
>AGCE01141575.1/4443-4377
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUU
.......(..(.....(...(.....(......).....)(.........)).....))........
>AAIY01498693.1/2014-1937
CCGAGCCGUUGCCUGCAGCUGAUGAGCUCCAACAAGAGCGAAACCGAACAGGUCCUGCAGUACGGGUGGGGUCAGCAG
.........(..(.....(...(.....(......).....)(.........)).....)).................
>AADN03002802.1/91438-91372
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUG
.......(..(.....(...(.....(......).....)(.........)).....))........
>AAKN02030441.1/10428-10505
UUGGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACUAGGUCCUGCAGUACUGGCUUAAGAUAAUG
.........(..(.....(...(.....(......).....)(.........)).....)).................
>ABQO010129822.1/1187-1253
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAUAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
.......(..(.....(...(.....(......).....)(.........)).....))........
>AFYH01089550.1/2099-2023
CAAGCAAGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUUAUAGGUCCUGUAGUACUGGCUUGUUACCAU
.........(..(.....(...(.....(......).....)(.........)).....))................
>AFEY01454121.1/10166-10232
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
.......(..(.....(...(.....(......).....)(.........)).....))........
>ABRN01375670.1/21703-21777
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUGAGAUA
.........(..(.....(...(.....(......).....)(.........)).....))..............
>AANN01066007.1/588-511
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGCUAGGUCCUGCAGUACUGGCUUAAGAGGCUA
.........(..(.....(...(.....(......).....)(.........)).....)).................
>ACTA01058962.1/24761-24837
AUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAUA
.........(..(.....(...(.....(......).....)(.........)).....))................
>AAWR02025218.1/31065-31139
CCGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGGUUAGGUCCUGCAGUACUGGCUUAAGAUA
.........(..(.....(...(.....(......).....)(.........)).....))..............
>ADDD01012933.1/19585-19662
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUGAAAUCUUUC
.........(..(.....(...(.....(......).....)(.........)).....)).................
>AFTD01093388.1/13316-13239
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUUAUGACAGUA
.........(..(.....(...(.....(......).....)(.........)).....)).................
>ABQF01023900.1/7348-7414
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUA
.......(..(.....(...(.....(......).....)(.........)).....))........
>AL773539.18/161561-161627
UGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUU
.......(..(.....(...(.....(......).....)(.........)).....))........
>AGTP01043633.1/33547-33613
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUU
.......(..(.....(...(.....(......).....)(.........)).....))........
4 (UGA()())
(.AANAA.)
U(RC(C))
(GA()GA)
 27 84.4
>AL773539.18/161561-161627
UGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUU
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
>AADN03002802.1/91438-91372
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUG
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
>AANN01066007.1/588-511
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGCUAGGUCCUGCAGUACUGGCUUAAGAGGCUA
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>AFYH01089550.1/2099-2023
CAAGCAAGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUUAUAGGUCCUGUAGUACUGGCUUGUUACCAU
.........(..(.....(...(..(..(......)..)..)(.........)).....))................
>ADDD01012933.1/19585-19662
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUGAAAUCUUUC
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>AAHX01036414.1/22499-22433
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUU
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
>ABRP01270906.1/1966-2043
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAAUA
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>AEYP01022184.1/5895-5972
GUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUGGAA
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>AAKN02030441.1/10428-10505
UUGGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACUAGGUCCUGCAGUACUGGCUUAAGAUAAUG
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>ABQO010129822.1/1187-1253
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAUAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
>AFTD01093388.1/13316-13239
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUUAUGACAGUA
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>AAPN01231077.1/15198-15121
UCCUGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAACCAGGUCCUGCAGUACUGGCGAAAGGAGCUU
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>AEKR01154328.1/10424-10501
UCUGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUUACCAUAGUA
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>AAFR03027197.1/99742-99816
UUAGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUUUAGCAU
.........(..(.....(...(..(..(......)..)..)(.........)).....))..............
>ABQF01023900.1/7348-7414
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUA
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
>AFEY01454121.1/10166-10232
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
>AGCE01141575.1/4443-4377
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUU
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
>AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........(..(.....(...(..(..(......)..)..)(.........)).....))..............
>AAQQ01544543.1/2644-2721
UAGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUUAAGACGGUA
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>AAQR03161315.1/4048-3972
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAGAAU
.........(..(.....(...(..(..(......)..)..)(.........)).....))................
>AGTP01043633.1/33547-33613
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUU
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
>ACTA01058962.1/24761-24837
AUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAUA
.........(..(.....(...(..(..(......)..)..)(.........)).....))................
>AAWR02025218.1/31065-31139
CCGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGGUUAGGUCCUGCAGUACUGGCUUAAGAUA
.........(..(.....(...(..(..(......)..)..)(.........)).....))..............
>AALT01643156.1/444-367
UCCAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACGAGGUCCUGCAGUACGGGCUUAGGGGAGCA
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>ABRQ01056532.1/2019-2096
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAACAGGUCCUGCAGUACUGGCUUAAGAUAGUG
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>ABRN01375670.1/21703-21777
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUGAGAUA
.........(..(.....(...(..(..(......)..)..)(.........)).....))..............
>AAIY01498693.1/2014-1937
CCGAGCCGUUGCCUGCAGCUGAUGAGCUCCAACAAGAGCGAAACCGAACAGGUCCUGCAGUACGGGUGGGGUCAGCAG
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
5 (UGA()())
(.AANAA.)
U(RC(C))
(GA()GA)
((C)N)G
 24 75.0
>ADDD01012933.1/19585-19662
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUGAAAUCUUUC
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
>AFYH01089550.1/2099-2023
CAAGCAAGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUUAUAGGUCCUGUAGUACUGGCUUGUUACCAU
.....(.(.(..(.....(...(..(..(......)..)..)(.........)).....)).).)............
>AAWR02025218.1/31065-31139
CCGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGGUUAGGUCCUGCAGUACUGGCUUAAGAUA
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)..........
>ABQO010129822.1/1187-1253
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAUAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
>ABRN01375670.1/21703-21777
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUGAGAUA
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)..........
>AAFR03027197.1/99742-99816
UUAGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUUUAGCAU
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)..........
>AAKN02030441.1/10428-10505
UUGGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACUAGGUCCUGCAGUACUGGCUUAAGAUAAUG
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
>AAQR03161315.1/4048-3972
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAGAAU
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)............
>AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)..........
>ABQF01023900.1/7348-7414
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUA
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
>AGTP01043633.1/33547-33613
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
>AEYP01022184.1/5895-5972
GUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUGGAA
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
>AFTD01093388.1/13316-13239
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUUAUGACAGUA
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
>AGCE01141575.1/4443-4377
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
>AAHX01036414.1/22499-22433
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
>AAPN01231077.1/15198-15121
UCCUGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAACCAGGUCCUGCAGUACUGGCGAAAGGAGCUU
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
>AADN03002802.1/91438-91372
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUG
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
>ABRQ01056532.1/2019-2096
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAACAGGUCCUGCAGUACUGGCUUAAGAUAGUG
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
>AL773539.18/161561-161627
UGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
>ABRP01270906.1/1966-2043
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAAUA
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
>AAQQ01544543.1/2644-2721
UAGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUUAAGACGGUA
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
>ACTA01058962.1/24761-24837
AUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAUA
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)............
>AALT01643156.1/444-367
UCCAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACGAGGUCCUGCAGUACGGGCUUAGGGGAGCA
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
>AFEY01454121.1/10166-10232
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
6 (UGA()())
(.AANAA.)
U(RC(C))
(GA()GA)
((C)N)G
N(RNN)A
 22 68.8
>AADN03002802.1/91438-91372
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUG
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
>ADDD01012933.1/19585-19662
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUGAAAUCUUUC
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
>ABQF01023900.1/7348-7414
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUA
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
>ABRP01270906.1/1966-2043
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAAUA
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
>ABQO010129822.1/1187-1253
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAUAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
>AAHX01036414.1/22499-22433
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
>AGTP01043633.1/33547-33613
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
>AAQR03161315.1/4048-3972
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAGAAU
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)............
>AAPN01231077.1/15198-15121
UCCUGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAACCAGGUCCUGCAGUACUGGCGAAAGGAGCUU
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
>AGCE01141575.1/4443-4377
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
>ACTA01058962.1/24761-24837
AUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAUA
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)............
>AFTD01093388.1/13316-13239
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUUAUGACAGUA
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
>AEYP01022184.1/5895-5972
GUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUGGAA
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
>AALT01643156.1/444-367
UCCAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACGAGGUCCUGCAGUACGGGCUUAGGGGAGCA
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
>ABRQ01056532.1/2019-2096
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAACAGGUCCUGCAGUACUGGCUUAAGAUAGUG
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
>AAWR02025218.1/31065-31139
CCGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGGUUAGGUCCUGCAGUACUGGCUUAAGAUA
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)..........
>AFEY01454121.1/10166-10232
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
>AAKN02030441.1/10428-10505
UUGGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACUAGGUCCUGCAGUACUGGCUUAAGAUAAUG
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
>AAQQ01544543.1/2644-2721
UAGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUUAAGACGGUA
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
>AAFR03027197.1/99742-99816
UUAGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUUUAGCAU
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)..........
>AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)..........
>ABRN01375670.1/21703-21777
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUGAGAUA
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)..........
7 (UGA()())
(.AANAA.)
U(RC(C))
(GA()GA)
((C)N)G
N(RNN)A
((G)G)U
 20 62.5
>AAFR03027197.1/99742-99816
UUAGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUUUAGCAU
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)..........
>AEYP01022184.1/5895-5972
GUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUGGAA
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
>AALT01643156.1/444-367
UCCAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACGAGGUCCUGCAGUACGGGCUUAGGGGAGCA
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
>ABQO010129822.1/1187-1253
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAUAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
>AFEY01454121.1/10166-10232
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
>ABQF01023900.1/7348-7414
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUA
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
>AFTD01093388.1/13316-13239
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUUAUGACAGUA
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
>ACTA01058962.1/24761-24837
AUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAUA
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)............
>AADN03002802.1/91438-91372
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUG
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
>ABRP01270906.1/1966-2043
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAAUA
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
>AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)..........
>ABRN01375670.1/21703-21777
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUGAGAUA
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)..........
>AGCE01141575.1/4443-4377
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
>AGTP01043633.1/33547-33613
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
>AAPN01231077.1/15198-15121
UCCUGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAACCAGGUCCUGCAGUACUGGCGAAAGGAGCUU
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
>AAQR03161315.1/4048-3972
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAGAAU
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)............
>ADDD01012933.1/19585-19662
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUGAAAUCUUUC
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
>AAHX01036414.1/22499-22433
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUU
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
>AAKN02030441.1/10428-10505
UUGGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACUAGGUCCUGCAGUACUGGCUUAAGAUAAUG
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
>ABRQ01056532.1/2019-2096
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAACAGGUCCUGCAGUACUGGCUUAAGAUAGUG
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
8 (UGA()())
(.AANAA.)
U(RC(C))
(GA()GA)
((C)N)G
N(RNN)A
((G)G)U
(A()U)
 19 59.4
>AGCE01141575.1/4443-4377
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUU
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>AALT01643156.1/444-367
UCCAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACGAGGUCCUGCAGUACGGGCUUAGGGGAGCA
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
>AEYP01022184.1/5895-5972
GUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUGGAA
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
>AAPN01231077.1/15198-15121
UCCUGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAACCAGGUCCUGCAGUACUGGCGAAAGGAGCUU
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
>AGTP01043633.1/33547-33613
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUU
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>AFTD01093388.1/13316-13239
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUUAUGACAGUA
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
>AAHX01036414.1/22499-22433
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUU
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>AAFR03027197.1/99742-99816
UUAGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUUUAGCAU
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..........
>ACTA01058962.1/24761-24837
AUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAUA
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)............
>ADDD01012933.1/19585-19662
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUGAAAUCUUUC
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
>ABQO010129822.1/1187-1253
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAUAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>ABQF01023900.1/7348-7414
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUA
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>ABRQ01056532.1/2019-2096
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAACAGGUCCUGCAGUACUGGCUUAAGAUAGUG
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
>ABRP01270906.1/1966-2043
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAAUA
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
>AAQR03161315.1/4048-3972
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAGAAU
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)............
>AFEY01454121.1/10166-10232
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>ABRN01375670.1/21703-21777
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUGAGAUA
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..........
>AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..........
>AAKN02030441.1/10428-10505
UUGGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACUAGGUCCUGCAGUACUGGCUUAAGAUAAUG
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
9 (UGA()())
(.AANAA.)
U(RC(C))
(GA()GA)
((C)N)G
N(RNN)A
((G)G)U
(A()U)
(().NNRR.)
 13 40.6
>AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....).
>ACTA01058962.1/24761-24837
AUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAUA
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)...
>AAFR03027197.1/99742-99816
UUAGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUUUAGCAU
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..)....)..
>ABRQ01056532.1/2019-2096
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAACAGGUCCUGCAGUACUGGCUUAAGAUAGUG
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)....
>AAKN02030441.1/10428-10505
UUGGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACUAGGUCCUGCAGUACUGGCUUAAGAUAAUG
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)....
>AEYP01022184.1/5895-5972
GUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUGGAA
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).......)..
>AALT01643156.1/444-367
UCCAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACGAGGUCCUGCAGUACGGGCUUAGGGGAGCA
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..)....).....
>AAPN01231077.1/15198-15121
UCCUGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAACCAGGUCCUGCAGUACUGGCGAAAGGAGCUU
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..)....).....
>ABRN01375670.1/21703-21777
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUGAGAUA
.(.(..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..)....)..
>ADDD01012933.1/19585-19662
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUGAAAUCUUUC
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)....
>AFTD01093388.1/13316-13239
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUUAUGACAGUA
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)....
>ABRP01270906.1/1966-2043
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAAUA
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)....
>AAQR03161315.1/4048-3972
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAGAAU
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)...

>AAPN01231077.1/15198-15121
UCCUGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAACCAGGUCCUGCAGUACUGGCGAAAGGAGCUU
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..)....).....
>ACTA01058962.1/24761-24837
AUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAUA
..................(...(..................)(.........)).......................
..................(...(.....(......).....)(.........)).......................
.........(..(.....(...(.....(......).....)(.........)).....))................
.........(..(.....(...(..(..(......)..)..)(.........)).....))................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)............
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)............
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)............
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)...
>AALT01643156.1/444-367
UCCAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACGAGGUCCUGCAGUACGGGCUUAGGGGAGCA
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..)....).....
>ABRN01375670.1/21703-21777
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUGAGAUA
..................(...(..................)(.........)).....................
..................(...(.....(......).....)(.........)).....................
.........(..(.....(...(.....(......).....)(.........)).....))..............
.........(..(.....(...(..(..(......)..)..)(.........)).....))..............
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)..........
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)..........
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)..........
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..........
.(.(..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..)....)..
>AEYP01022184.1/5895-5972
GUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUGGAA
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).......)..
>ABRQ01056532.1/2019-2096
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAACAGGUCCUGCAGUACUGGCUUAAGAUAGUG
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)....
>AAQR03161315.1/4048-3972
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAGAAU
..................(...(..................)(.........)).......................
..................(...(.....(......).....)(.........)).......................
.........(..(.....(...(.....(......).....)(.........)).....))................
.........(..(.....(...(..(..(......)..)..)(.........)).....))................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)............
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)............
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)............
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)...
>AAKN02030441.1/10428-10505
UUGGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUACUAGGUCCUGCAGUACUGGCUUAAGAUAAUG
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)....
>ABRP01270906.1/1966-2043
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUUAAGAUAAUA
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)....
>AFTD01093388.1/13316-13239
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUUAUGACAGUA
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)....
>ADDD01012933.1/19585-19662
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUGAAAUCUUUC
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).).............
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).).............
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....)....
>AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
..................(...(..................)(.........)).....................
..................(...(.....(......).....)(.........)).....................
.........(..(.....(...(.....(......).....)(.........)).....))..............
.........(..(.....(...(..(..(......)..)..)(.........)).....))..............
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)..........
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)..........
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)..........
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..........
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..).....).
>AAFR03027197.1/99742-99816
UUAGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUUUAGCAU
..................(...(..................)(.........)).....................
..................(...(.....(......).....)(.........)).....................
.........(..(.....(...(.....(......).....)(.........)).....))..............
.........(..(.....(...(..(..(......)..)..)(.........)).....))..............
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)..........
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)..........
......((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)..........
......((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..........
..((..((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)..)....)..
>AFEY01454121.1/10166-10232
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
................(...(.....(......).....)(.........))...............
.......(..(.....(...(.....(......).....)(.........)).....))........
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>AAHX01036414.1/22499-22433
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
................(...(.....(......).....)(.........))...............
.......(..(.....(...(.....(......).....)(.........)).....))........
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>ABQF01023900.1/7348-7414
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUA
................(...(..................)(.........))...............
................(...(.....(......).....)(.........))...............
.......(..(.....(...(.....(......).....)(.........)).....))........
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>ABQO010129822.1/1187-1253
AGGCCGUUACCUGCAGCUGAUGAGCUCCAAUAAGAGCGAAACCAAUUAGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
................(...(.....(......).....)(.........))...............
.......(..(.....(...(.....(......).....)(.........)).....))........
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>AGTP01043633.1/33547-33613
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
................(...(.....(......).....)(.........))...............
.......(..(.....(...(.....(......).....)(.........)).....))........
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>AGCE01141575.1/4443-4377
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUAUUAGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
................(...(.....(......).....)(.........))...............
.......(..(.....(...(.....(......).....)(.........)).....))........
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
....((.(..(..(.((...(..(..(......)..)..)(.((...)).))).)..)).).)....
>AADN03002802.1/91438-91372
GAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCAGUUAGGUCCUGCAGUACUGGCUG
................(...(..................)(.........))...............
................(...(.....(......).....)(.........))...............
.......(..(.....(...(.....(......).....)(.........)).....))........
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)....
....((.(..(.....(...(..(..(......)..)..)(.((...)).)).....)).).)....
>AAQQ01544543.1/2644-2721
UAGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAUAAGGUCCUGCAGUACUGGCUUAAGACGGUA
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).).............
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).).............
>AAWR02025218.1/31065-31139
CCGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGGUUAGGUCCUGCAGUACUGGCUUAAGAUA
..................(...(..................)(.........)).....................
..................(...(.....(......).....)(.........)).....................
.........(..(.....(...(.....(......).....)(.........)).....))..............
.........(..(.....(...(..(..(......)..)..)(.........)).....))..............
......((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)..........
......((.(..(.....(...(..(..(......)..)..)(..(...)..)).....)).).)..........
>AL773539.18/161561-161627
UGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUU
................(...(..................)(.........))...............
................(...(.....(......).....)(.........))...............
.......(..(.....(...(.....(......).....)(.........)).....))........
.......(..(.....(...(..(..(......)..)..)(.........)).....))........
....((.(..(.....(...(..(..(......)..)..)(.........)).....)).).)....
>AFYH01089550.1/2099-2023
CAAGCAAGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUUAUAGGUCCUGUAGUACUGGCUUGUUACCAU
..................(...(..................)(.........)).......................
..................(...(.....(......).....)(.........)).......................
.........(..(.....(...(.....(......).....)(.........)).....))................
.........(..(.....(...(..(..(......)..)..)(.........)).....))................
.....(.(.(..(.....(...(..(..(......)..)..)(.........)).....)).).)............
>AANN01066007.1/588-511
CUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGCUAGGUCCUGCAGUACUGGCUUAAGAGGCUA
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>AAIY01498693.1/2014-1937
CCGAGCCGUUGCCUGCAGCUGAUGAGCUCCAACAAGAGCGAAACCGAACAGGUCCUGCAGUACGGGUGGGGUCAGCAG
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>AEKR01154328.1/10424-10501
UCUGGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUGGGUCCUGCAGUACUGGCUUACCAUAGUA
..................(...(..................)(.........))........................
..................(...(.....(......).....)(.........))........................
.........(..(.....(...(.....(......).....)(.........)).....)).................
.........(..(.....(...(..(..(......)..)..)(.........)).....)).................
>ABQF01059171.1/305-384
UUGGGCCGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUGCUAAGCAAGGUCCUGUAGUAUUGGCCUGAACCC
..................(...(..................)..(..........)).......................
..................(...(.....(......).....)..(..........)).......................
>AADN03003451.1/4511-4593
CUGGGCCGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUUGUAAAAUAGGUCCUGUAGUAUUGGCCUGAUGAGCUC
..................(...(..................).(............).)........................
>AAWZ02032198.1/15823-15741
UGAGGCCGUUACCUACAGCUGAUGAGCUCCAAAAAGAGCGAAACCUGUUAAAAUAGGUCCUGUAGUAUUGGCCGACUGAGCCG
..................(...(..................).(............).)........................
>AGAI01055016.1/63287-63205
UUAGGCCGUUACCUACAGCUGAUGAGCUCCAAGAAGAGCGAAACCUUUUAAGAUAGGUCCUGUAGUAUUGGCCUGAAAACCAU
..................(...(..................).(............).)........................

ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio
1 (UGA()()) < 0.001 131
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
2 (.AANAA.) < 0.001 30.5
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
3 U(RC(C)) < 0.001 20.4
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
4 (GA()GA) < 0.001 11.3
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
5 N(RNN)A < 0.001 3.28
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
6 ((C)N)G < 0.001 1.66
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
7 (().NNRR.) < 0.001 1.61
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
8 ((G)G)U < 0.001 1.84
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
9 (A()U) < 0.001 1.25
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio

NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio
1 G(CU(G)) < 0.001 100
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
2 (.AARAR.) < 0.001 21.3
AAGU03018532.1/57571-57497
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
UUGAGCCGUUACCUGCAGCUGAUGAGCUCCAAAAAGAGCGAAACCGAAUAGGUCCUGCAGUACUGGCUUAAGACA
.........1.........2.........3.........4.........5.........6.........7.....
123456789012345678901234567890123456789012345678901234567890123456789012345
NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).