D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major
D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences
J. Mol. Biol., 435 (2023)

Small nucleolar RNA SNORA17   (Rfam: RF00560)

Seed sequences
All NCMs (CSV file) (all) positive sequences (all) negative sequences (random) (training) positive sequences (training) negative sequences (testing) positive sequences (testing) negative sequences 

Options
Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN
Rfam
D-ORB
Augmented
R(YG(Y))
R(G(A))
(.NU.)
90.2
97.6
100.0
(.NU.)

% of positive sequence with ORB





Deep neural network:

5-fold cross-validation: 99.3 %
(± 0.22 %)
Decision tree:

5-fold cross-validation: 81.3 %
(± 11.7 %)
D-ORB structure
D-ORB structure decision tree:

5-fold cross-validation: 83.1 %
(± 4 %)
of AAWZ02037419.1/5349-5207
AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
((((((((((.(((..((((((((((((((....))))))))))))))))))))).))))).)...(((((((((((((((((((((((((((((((((((((..)))))))))))))))))))).)))))))))))))))))
...................................................................................................1...........................................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3.........4...
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123

abstract shape: ()(()())

Number of sequences
Structure ORBs (out of 41) (%)
1 R(YG(Y))
 34 82.9
>AAIY01268469.1/912-1041
ACUGCCCCUAGAAGCAUUGCAGCGUGGCCACCCUGCCACAGCUGUGUCAUUAGAGGGCAAAGAGAAGAGGGGCUAUGUCUAGGCUCAGGGGUCUGACGUGAACCACCUGACUGACUGCUAGCCCCACAGU
.....................(..(............))...........................................................................................
>AC147162.2/137638-137507
ACUGCCCCUAGAGGCAUUGCAGAUAUGGCGGCUGUGUCACAUGUGUGCCAGUAGGUGGCAGAGAGGAGAAAGGUUAUGUCUAUGCUCAAUGUUCUGAUCUAUGGACAUCUGAAUAAUUAGUAGUCUAACAAU
.................................................................................(..(..................................))...........
>AL929577.9/115568-115437
UCUGCCCCUACAGGCGUUGCAGGUGUGGCUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUAUGUCUACGCUCAGUGUUCUGACCUGUGAACAUCUGAAUGAUUAGUAGCCUAACAUU
.................................................................................(..(..................................))...........
>AANG01443872.1/432-299
ACUGCCCCCAGAGGCGUUGCAGGUGUGGCUGCGUUUGUGUCACAUUUGUGUCAUUCGGCGGCAGAGAGAAGGGAGGCUUGUCUACGCCCAGCGUUCCGGCUGCAGAACGUCUGGAUGAUUAAUAGCCUGACAGC
.............(..(.................................))..................................................................................
>AK090585.1/512-643
ACUGCCCCUAGAGGCGUUGCAGCUGUGGCUGCCGUGUCACAUCUGUGUCAUUAGGUGGCAGAGAUUAGAGAGGCUAUGUCUACGCUCAGCGUUCUGCCCCGUGAACGUUUGAAUGUUUGAUAGUCUCACACU
.............(..(..............................))...................................................................................
>AC139319.6/13901-14032
UUUGCCUCUAGAGGUAUUGCAGGUAUGGCUGCUGUGUCACAUGUGCAUCAAGAGGUGGCAGAGGGGAGAAAGGCUAUGUCUACACUCAGUGUUCUAACAUGUGAACAUCUGAAUGGUCAGUAGUCUAACAUU
..........................................(..(..................................................))..................................
>AC160393.2/162851-162720
CUUGCUCCUAAAGGCAUUGCAGGUGUGACUGCUGGGUCACCUGUACGUCAGUGGGUGGCAGAGUAGAGAGAGGCUAUGUCUAUACUCAGUGUUCUGACCUUCGAGCAUCUGAAUGAUUAGUAGCCUAACACU
......................(..(............))............................................................................................
>AC116747.10/162742-162873
CCUGCCCCUACCAGCAUUGCAGUUGUGGCUGCUCUGUUGCAUAUGUGUCAGCAGGUGGCAGAGAGGAGAGAGGCUGUGUCUAUGCUCAGUGUCCUGACCUGUGAACAUCUGAAUGAUUAGUAACCUCACAUU
...........................................................................(..(.........................................))..........
>AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
.............(..(..............................))..............................................................................................
>BC042667.1/532-663
ACUGCCCCUAGAGGCGUUGCAGCUGUGGCUGCCGUGUCACAUCUGUGUCAUUAAGUGGCAGAGAUUAGAGAGGCUAUGUCUACGCUCAGCGUUCUGCCCCGUGAACGUUUGAAUGUUUGAUAGUCUCACACU
.............(..(..............................))...................................................................................
>AAFR03005638.1/59378-59246
AUUGCCCCUAGAGGCGUUACAAAUUUGGCUGCUGUGCCUCAUUUGUGUCAGUAGGUGGCAAAGAGAAAGAGACUAUGUCUACGCUCAGUGCUCUGACCCAGUGAGCACUCAGAAUGAUUAAUAGCCUGACACU
.............(..(..............................))....................................................................................
>AC156631.2/55855-55724
CCUGCUCCUAGAGGCAUUGUAGGUGUGGCUGCUGUGUCACAUGCACGUCGGUAGGUGGCAGAGAGGAGAGAGGCUACAUCUACACUCAGUGUUCUGGCCUGUGAAUGUCUGCAUGAUUAGUAGCCUAAUAUU
......................(..(............))............................................................................................
>AAPY01364388.1/271-141
CCUGCCCCUAGAGGCGUUGCAGAUGUGGCUGCUGUGUCACAGCUGCGUCAGUAGUGGGCAGAGAGCAAGAGGCUAUGUCUACGCUCAGUGUUCUGACUCGUGAACAUUUGAAUGAUUAGUAGCCUCACACU
.............(..(..............................))..................................................................................
>AL732311.13/50067-49936
CCUGCUCCUAGAGGCGUUGCAGGUGUGGCUGCUGUGUCACAUGUGCGUCAGUAGGUGGCAGAGAGAAAAGAGGCUAUGUCUACGCUCAGUGUUCUGCCCUGUGAACGUCUGAAUGAUUUGUAGCCUGACAAC
...........................................................................(..(....................................)....)...........
>BX936366.8/102933-103064
CCUGCCCCUAGAGGUGUUUUAGGUGUGGCUGCAGUGUCAUAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUGUGCCUAUGCUCACUGUUCAGACCAUUGAACAUUUGAAUGAUCAGUAGCCUAACAUU
.............(..(..............................))...................................................................................
>AC120020.9/24687-24556
CCUGCCCCUAGAGGCGUUGCAGGUGUGGCUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAAAGAGGCUAUGUCUACGCUCAGUGUUCUGAUCUGUGAACAUCUGAAUGAUUAGUAGCCAAACAUU
.................................................................................(..(..................................))...........
>AL671963.9/45705-45574
CCUGCCUCUGGAAGCAUUGCAGAUGUGACUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUAUGUCUACGCUCAGUGUUCUAACCGAUGGGCAUCUGAAUGGUUAUUAGCCUAACGUG
.................................................................................(..(...........................))..................
>AL772346.5/72472-72603
CCUGCCCAUAGAGAUAUUGCAGGUUUGGCUGCUGUGUCACAUGUGCGUCAGUAGGUGGCAGAGGGGAGAGAGGCUAUGUCUAUGCUCAGUGUUCAGAUCUAGGAACUUCUGAAUGUUUCUUAGCCUAACACU
........................................................................................(..(....................)..)................
>AAYZ01571100.1/456-325
GCUGCCCCUCGAGGCGUUGCAGGUGCGGCUGCUGUGCCGCACCUGUGUCAGCAGGUGGCAGAGAGCAGUGCGGCUACGUCUACGCUCCGCGCCCUGGCACGUGGGCUUCGGAAUGAUUAGUAGGCGGACAGC
.............(..(..............................))...................................................................................
>AC160983.2/170827-170958
CCUUCCCCUAGAGGCUUUGCAGGUGUGGCUGCUCUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGUAGAGAAGUUAUGUCUAUGCUCAGUGUUUUGACCUGUGAAUAUCUGAAUGAUUAGUAGCCUAACAAU
...........................................................................(..(.............................))......................
>AL663042.5/46926-46793
CCUGCCCCUAGAGGUGUUGCAUGUAUGGCUGCUGUGUCAUGUGUGCAUCAGUAGGUGGCAGAGAGGAGAGAGUCUAUGUUCAGGCUCAGUGUUCUGGCCUAUGGACUUCUCUGAAUGAUUAGUGGCCUGACACA
.............(..(..............................)).....................................................................................
>AC102195.14/77372-77241
CCUGCCCCUAGAGGCCUUGCAGGUGUGGCUGCUGUGUCCCAUGUGGGUCAAUAGGUGGCAGAGAGGAGAAAGGCUAUGUCUUCGGUCUGUGUUCUGACCUAGGAACAUCUGAAUGAUUAGUAACCUAACAUC
...........................................................................(..(.......................................).)...........
>AANN01080924.1/908-778
CCUGCCCCUAGAGGCGUUACAGAUGUGACUGCUGUGUCACAUGUGUGUCAAUAGGUGGCAGAGAGAAGAGAGGCUUGUCUACGUCCAGUGCUCUGACCUGUGAGCCACUGGGUGAUUGAUAGUCUGACACU
.............(..(..............................))..................................................................................
>AC044804.4/242661-242530
UUUGUCCCUAGAGGAGUUGCAGGUGUGGCUGCUGUGUCACAUGGGUGUCAGUAGGUGGCAGAGAGGAGAGAGGUUAUGUCUAUGCUCAGUGUUCUGAUCUGUGAACCUCUGAAUGAUAGGUAGUUUAACAUA
...........................................................................(..(......................)).............................
>AAPE02023258.1/7569-7440
ACUGCCCCUAGAGGCAUUGUAGGUGUGGCUGCCAUGUUGCACCUGCGUCAUUAGGUGGCAGAGAGCAGAGAGGCUUGCCUACGCCCAGCAUCCUGGCUGUGGGCGCCUGGAUGGUUGACGGCCUGGCACU
......................................................................................................(..(.......))...............
>AAPN01114604.1/4824-4957
GGUGCCCCUCGAGGCGUUGCAGAUGUGGCUGCGGUGCCCCAUUUGUGUCAUGAGGUGGCAGAGAGGAUAAGGCUAUGUCUACGCUCCGUGUUCAAAAAUUUGUGAGCACGCAGAAUGAUUAAUAGCCUGACAGU
.............(..(..............................)).....................................................................................
>AAFC03086501.1/28639-28770
ACUGCCCCUAGAGGCGCUGCAGGCGUGGCUGCCGUGUCACGUCUGCGUCAUGAGGUGGCAGAGAGGAAAGAGGCUCGGUCUACGCCCAGUGUUCUGGCCGGUGGACAUCUGGAUGAUUGAUAGUCUGACACU
.............(..(.............................))....................................................................................
>AC159274.2/136463-136332
ACUGCCCCUAGAGGUUUUGCAGGUGUGGCUGCUGUGUCACAUGUGCAUCAGUAGGAGGCAGAGAGAAGAGAGGCUAUGCCUGUGCUCAGUGUUCUGACCUGUGAACAACUGAAUCAUUAGUAGCCUAACAGU
.................................................................................(..(...........................).).................
>AAWR02025983.1/946-1076
ACUGCCCCUAGAGGCGUUACAGAUGUGGCUGCGGUGUCACAUUUGUGUCAUUGGGUGGCAGAGAGAAGAGAGGCUUGUCUACGCUCAGUGUUCUGGCCUGUGGACGCCUGGAUGAUGAAUAGUCUGACACU
.............(..(..............................))..................................................................................
>AC125262.9/82422-82292
CCUGCCCCUAGAAGCACUGUACGUGUGGCUGCUGUGUCACCGGUGUGUCAGUAGGUGGCAGAGAGGAGACAGGCUGUGCCUAAGCUCAGUGUUCUGACCUUUGAACAGCUGAAUGAUGGUAGCCUGACAUU
...........................................................................(..(......................................).)...........
>ABDC01163242.1/9845-9714
ACUUCUCCUAGAGGCAUUGCAGAUGUGGGUGCUGUGUCACAUUUGUGUCAUUAGGUGACAGAGAGAGGAGAGGCUAUGUCUACAUUCAGUGUUCUGACCCAUGAAUGUUUGAAUGAUUAAUAGUCUGCCAUA
.................................(..(...............................).).............................................................
>AACN010677500.1/623-491
ACUGCCCCCAGAGGCGUUGCAGGUGUGGCUGCAUCUGUGUCACAUUUGUGUCAUUGGGUGGCAGAAAGAAGAGAGGCUUAUCUACGCCCAGUGUUCAGCUGGUGAACGUCUGGAUGAUUAAUAGUCUGACACU
.............(..(................................))..................................................................................
>AAHX01069608.1/34817-34686
CCUGCCCCUAGAGGCACUGCAGGUGUGGCUGCUGUGUCACAUGUGCGUCAGUAGGUGGCAGAGAGGAAAGAGGCUAUGUCUACGCUCAGUGUUCUGACCUGUGAACAUUUGAAUGAUUAGUAGCCUAAUAUU
...........................................................................(..(.......................................).)...........
>AC124719.3/60776-60645
ACUGCCCCUAGAGGCUUUGCAGGUGUGGCCGCUGUGUCAUAUGUGUGUCAAUAGGUGGCAGGGAGGAGAGUGACUAUGUCUAUGCUCAGUGUUCUGACCCAUGAACAUCAGAGUGAUUAGCAGCCUAACAUC
........................................................................................(..(....................)..)................
2 R(YG(Y))
R(G(A))
 25 61.0
>AAPY01364388.1/271-141
CCUGCCCCUAGAGGCGUUGCAGAUGUGGCUGCUGUGUCACAGCUGCGUCAGUAGUGGGCAGAGAGCAAGAGGCUAUGUCUACGCUCAGUGUUCUGACUCGUGAACAUUUGAAUGAUUAGUAGCCUCACACU
.........(.(.(..(..............................)).))...............................................................................
>AC125262.9/82422-82292
CCUGCCCCUAGAAGCACUGUACGUGUGGCUGCUGUGUCACCGGUGUGUCAGUAGGUGGCAGAGAGGAGACAGGCUGUGCCUAAGCUCAGUGUUCUGACCUUUGAACAGCUGAAUGAUGGUAGCCUGACAUU
................................................................(.(........(..(......................................).)........)).
>AAHX01069608.1/34817-34686
CCUGCCCCUAGAGGCACUGCAGGUGUGGCUGCUGUGUCACAUGUGCGUCAGUAGGUGGCAGAGAGGAAAGAGGCUAUGUCUACGCUCAGUGUUCUGACCUGUGAACAUUUGAAUGAUUAGUAGCCUAAUAUU
................................................................(.(........(..(.......................................).)........)).
>AC160983.2/170827-170958
CCUUCCCCUAGAGGCUUUGCAGGUGUGGCUGCUCUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGUAGAGAAGUUAUGUCUAUGCUCAGUGUUUUGACCUGUGAAUAUCUGAAUGAUUAGUAGCCUAACAAU
..................................................................(.(......(..(.............................))......))..............
>AL663042.5/46926-46793
CCUGCCCCUAGAGGUGUUGCAUGUAUGGCUGCUGUGUCAUGUGUGCAUCAGUAGGUGGCAGAGAGGAGAGAGUCUAUGUUCAGGCUCAGUGUUCUGGCCUAUGGACUUCUCUGAAUGAUUAGUGGCCUGACACA
.........(.(.(..(..............................)).))..................................................................................
>AC102195.14/77372-77241
CCUGCCCCUAGAGGCCUUGCAGGUGUGGCUGCUGUGUCCCAUGUGGGUCAAUAGGUGGCAGAGAGGAGAAAGGCUAUGUCUUCGGUCUGUGUUCUGACCUAGGAACAUCUGAAUGAUUAGUAACCUAACAUC
..................................................................(.(......(..(.......................................).).....))....
>AACN010677500.1/623-491
ACUGCCCCCAGAGGCGUUGCAGGUGUGGCUGCAUCUGUGUCACAUUUGUGUCAUUGGGUGGCAGAAAGAAGAGAGGCUUAUCUACGCCCAGUGUUCAGCUGGUGAACGUCUGGAUGAUUAAUAGUCUGACACU
.........(.(.(..(.................................)).))..............................................................................
>AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
.........(.(.(..(..............................)).))...........................................................................................
>AC159274.2/136463-136332
ACUGCCCCUAGAGGUUUUGCAGGUGUGGCUGCUGUGUCACAUGUGCAUCAGUAGGAGGCAGAGAGAAGAGAGGCUAUGCCUGUGCUCAGUGUUCUGACCUGUGAACAACUGAAUCAUUAGUAGCCUAACAGU
...............................................................(.(.........(..(........................................)).........))
>AANN01080924.1/908-778
CCUGCCCCUAGAGGCGUUACAGAUGUGACUGCUGUGUCACAUGUGUGUCAAUAGGUGGCAGAGAGAAGAGAGGCUUGUCUACGUCCAGUGCUCUGACCUGUGAGCCACUGGGUGAUUGAUAGUCUGACACU
.........(.(.(..(..............................)).))...............................................................................
>BC042667.1/532-663
ACUGCCCCUAGAGGCGUUGCAGCUGUGGCUGCCGUGUCACAUCUGUGUCAUUAAGUGGCAGAGAUUAGAGAGGCUAUGUCUACGCUCAGCGUUCUGCCCCGUGAACGUUUGAAUGUUUGAUAGUCUCACACU
.............................................................(.(...........(..(........................................)).........))
>ABDC01163242.1/9845-9714
ACUUCUCCUAGAGGCAUUGCAGAUGUGGGUGCUGUGUCACAUUUGUGUCAUUAGGUGACAGAGAGAGGAGAGGCUAUGUCUACAUUCAGUGUUCUGACCCAUGAAUGUUUGAAUGAUUAAUAGUCUGCCAUA
....................................................................(.(....(..(................................).)...........)).....
>AANG01443872.1/432-299
ACUGCCCCCAGAGGCGUUGCAGGUGUGGCUGCGUUUGUGUCACAUUUGUGUCAUUCGGCGGCAGAGAGAAGGGAGGCUUGUCUACGCCCAGCGUUCCGGCUGCAGAACGUCUGGAUGAUUAAUAGCCUGACAGC
.........(.(.(..(.................................))..))..............................................................................
>AAFC03086501.1/28639-28770
ACUGCCCCUAGAGGCGCUGCAGGCGUGGCUGCCGUGUCACGUCUGCGUCAUGAGGUGGCAGAGAGGAAAGAGGCUCGGUCUACGCCCAGUGUUCUGGCCGGUGGACAUCUGGAUGAUUGAUAGUCUGACACU
.........(.(.(..(.............................))..))................................................................................
>AL671963.9/45705-45574
CCUGCCUCUGGAAGCAUUGCAGAUGUGACUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUAUGUCUACGCUCAGUGUUCUAACCGAUGGGCAUCUGAAUGGUUAUUAGCCUAACGUG
....................................................................(.(..........(..(...........................))...........).)....
>AC147162.2/137638-137507
ACUGCCCCUAGAGGCAUUGCAGAUAUGGCGGCUGUGUCACAUGUGUGCCAGUAGGUGGCAGAGAGGAGAAAGGUUAUGUCUAUGCUCAAUGUUCUGAUCUAUGGACAUCUGAAUAAUUAGUAGUCUAACAAU
................................................................(.(..............(..(..................................))....)..)...
>AAFR03005638.1/59378-59246
AUUGCCCCUAGAGGCGUUACAAAUUUGGCUGCUGUGCCUCAUUUGUGUCAGUAGGUGGCAAAGAGAAAGAGACUAUGUCUACGCUCAGUGCUCUGACCCAGUGAGCACUCAGAAUGAUUAAUAGCCUGACACU
.........(.(.(..(..............................)).)).................................................................................
>AK090585.1/512-643
ACUGCCCCUAGAGGCGUUGCAGCUGUGGCUGCCGUGUCACAUCUGUGUCAUUAGGUGGCAGAGAUUAGAGAGGCUAUGUCUACGCUCAGCGUUCUGCCCCGUGAACGUUUGAAUGUUUGAUAGUCUCACACU
.........(.(.(..(..............................)).))................................................................................
>BX936366.8/102933-103064
CCUGCCCCUAGAGGUGUUUUAGGUGUGGCUGCAGUGUCAUAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUGUGCCUAUGCUCACUGUUCAGACCAUUGAACAUUUGAAUGAUCAGUAGCCUAACAUU
.........(.(.(..(..............................)).))................................................................................
>AC116747.10/162742-162873
CCUGCCCCUACCAGCAUUGCAGUUGUGGCUGCUCUGUUGCAUAUGUGUCAGCAGGUGGCAGAGAGGAGAGAGGCUGUGUCUAUGCUCAGUGUCCUGACCUGUGAACAUCUGAAUGAUUAGUAACCUCACAUU
.............................................................(.(...........(..(.........................................))........))
>AL929577.9/115568-115437
UCUGCCCCUACAGGCGUUGCAGGUGUGGCUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUAUGUCUACGCUCAGUGUUCUGACCUGUGAACAUCUGAAUGAUUAGUAGCCUAACAUU
....................................................................(.(..........(..(..................................))....)).....
>AC120020.9/24687-24556
CCUGCCCCUAGAGGCGUUGCAGGUGUGGCUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAAAGAGGCUAUGUCUACGCUCAGUGUUCUGAUCUGUGAACAUCUGAAUGAUUAGUAGCCAAACAUU
....................................................................(.(..........(..(..................................))....)).....
>AAWR02025983.1/946-1076
ACUGCCCCUAGAGGCGUUACAGAUGUGGCUGCGGUGUCACAUUUGUGUCAUUGGGUGGCAGAGAGAAGAGAGGCUUGUCUACGCUCAGUGUUCUGGCCUGUGGACGCCUGGAUGAUGAAUAGUCUGACACU
.........(.(.(..(..............................))..))..............................................................................
>AL732311.13/50067-49936
CCUGCUCCUAGAGGCGUUGCAGGUGUGGCUGCUGUGUCACAUGUGCGUCAGUAGGUGGCAGAGAGAAAAGAGGCUAUGUCUACGCUCAGUGUUCUGCCCUGUGAACGUCUGAAUGAUUUGUAGCCUGACAAC
...............................................................(.(.........(..(....................................)....).....)...).
>AC044804.4/242661-242530
UUUGUCCCUAGAGGAGUUGCAGGUGUGGCUGCUGUGUCACAUGGGUGUCAGUAGGUGGCAGAGAGGAGAGAGGUUAUGUCUAUGCUCAGUGUUCUGAUCUGUGAACCUCUGAAUGAUAGGUAGUUUAACAUA
..................................................................(.(......(..(......................))......)).....................
3 R(YG(Y))
R(G(A))
(.NU.)
 18 43.9
>AL671963.9/45705-45574
CCUGCCUCUGGAAGCAUUGCAGAUGUGACUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUAUGUCUACGCUCAGUGUUCUAACCGAUGGGCAUCUGAAUGGUUAUUAGCCUAACGUG
................................................................(.(..............(..(.............(....)........))...............)).
>AAFC03086501.1/28639-28770
ACUGCCCCUAGAGGCGCUGCAGGCGUGGCUGCCGUGUCACGUCUGCGUCAUGAGGUGGCAGAGAGGAAAGAGGCUCGGUCUACGCCCAGUGUUCUGGCCGGUGGACAUCUGGAUGAUUGAUAGUCUGACACU
.........(.(.(..(...........(......)..........))..))................................................................................
>AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
.........(.(.(..(............(....)............)).))...........................................................................................
>AC044804.4/242661-242530
UUUGUCCCUAGAGGAGUUGCAGGUGUGGCUGCUGUGUCACAUGGGUGUCAGUAGGUGGCAGAGAGGAGAGAGGUUAUGUCUAUGCUCAGUGUUCUGAUCUGUGAACCUCUGAAUGAUAGGUAGUUUAACAUA
..................................................................(.(......(..(..........(..)........))......)).....................
>AAFR03005638.1/59378-59246
AUUGCCCCUAGAGGCGUUACAAAUUUGGCUGCUGUGCCUCAUUUGUGUCAGUAGGUGGCAAAGAGAAAGAGACUAUGUCUACGCUCAGUGCUCUGACCCAGUGAGCACUCAGAAUGAUUAAUAGCCUGACACU
.........(.(.(..(............(....)............)).)).................................................................................
>AAPY01364388.1/271-141
CCUGCCCCUAGAGGCGUUGCAGAUGUGGCUGCUGUGUCACAGCUGCGUCAGUAGUGGGCAGAGAGCAAGAGGCUAUGUCUACGCUCAGUGUUCUGACUCGUGAACAUUUGAAUGAUUAGUAGCCUCACACU
.........(.(.(..(............(....)............)).))...............................................................................
>AK090585.1/512-643
ACUGCCCCUAGAGGCGUUGCAGCUGUGGCUGCCGUGUCACAUCUGUGUCAUUAGGUGGCAGAGAUUAGAGAGGCUAUGUCUACGCUCAGCGUUCUGCCCCGUGAACGUUUGAAUGUUUGAUAGUCUCACACU
.........(.(.(..(...........(......)...........)).))................................................................................
>AC102195.14/77372-77241
CCUGCCCCUAGAGGCCUUGCAGGUGUGGCUGCUGUGUCCCAUGUGGGUCAAUAGGUGGCAGAGAGGAGAAAGGCUAUGUCUUCGGUCUGUGUUCUGACCUAGGAACAUCUGAAUGAUUAGUAACCUAACAUC
..................................................................(.(......(..(................(....).................).).....))....
>BC042667.1/532-663
ACUGCCCCUAGAGGCGUUGCAGCUGUGGCUGCCGUGUCACAUCUGUGUCAUUAAGUGGCAGAGAUUAGAGAGGCUAUGUCUACGCUCAGCGUUCUGCCCCGUGAACGUUUGAAUGUUUGAUAGUCUCACACU
.............................................................(.(...........(..(..............(........)................)).........))
>AC160983.2/170827-170958
CCUUCCCCUAGAGGCUUUGCAGGUGUGGCUGCUCUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGUAGAGAAGUUAUGUCUAUGCUCAGUGUUUUGACCUGUGAAUAUCUGAAUGAUUAGUAGCCUAACAAU
..................................................................(.(......(..(............(...)............))......))..............
>AL663042.5/46926-46793
CCUGCCCCUAGAGGUGUUGCAUGUAUGGCUGCUGUGUCAUGUGUGCAUCAGUAGGUGGCAGAGAGGAGAGAGUCUAUGUUCAGGCUCAGUGUUCUGGCCUAUGGACUUCUCUGAAUGAUUAGUGGCCUGACACA
.........(.(.(..(............(....)............)).))..................................................................................
>AL929577.9/115568-115437
UCUGCCCCUACAGGCGUUGCAGGUGUGGCUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUAUGUCUACGCUCAGUGUUCUGACCUGUGAACAUCUGAAUGAUUAGUAGCCUAACAUU
................................................................(.(..............(..(............(........)............))........)).
>AAWR02025983.1/946-1076
ACUGCCCCUAGAGGCGUUACAGAUGUGGCUGCGGUGUCACAUUUGUGUCAUUGGGUGGCAGAGAGAAGAGAGGCUUGUCUACGCUCAGUGUUCUGGCCUGUGGACGCCUGGAUGAUGAAUAGUCUGACACU
.........(.(.(..(...........(......)...........)).))...............................................................................
>AANN01080924.1/908-778
CCUGCCCCUAGAGGCGUUACAGAUGUGACUGCUGUGUCACAUGUGUGUCAAUAGGUGGCAGAGAGAAGAGAGGCUUGUCUACGUCCAGUGCUCUGACCUGUGAGCCACUGGGUGAUUGAUAGUCUGACACU
.........(.(.(..(............(....)............)).))...............................................................................
>ABDC01163242.1/9845-9714
ACUUCUCCUAGAGGCAUUGCAGAUGUGGGUGCUGUGUCACAUUUGUGUCAUUAGGUGACAGAGAGAGGAGAGGCUAUGUCUACAUUCAGUGUUCUGACCCAUGAAUGUUUGAAUGAUUAAUAGUCUGCCAUA
....................................................................(.(....(..(............(......)............).)...........)).....
>BX936366.8/102933-103064
CCUGCCCCUAGAGGUGUUUUAGGUGUGGCUGCAGUGUCAUAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUGUGCCUAUGCUCACUGUUCAGACCAUUGAACAUUUGAAUGAUCAGUAGCCUAACAUU
.........(.(.(..(...........(......)...........)).))................................................................................
>AACN010677500.1/623-491
ACUGCCCCCAGAGGCGUUGCAGGUGUGGCUGCAUCUGUGUCACAUUUGUGUCAUUGGGUGGCAGAAAGAAGAGAGGCUUAUCUACGCCCAGUGUUCAGCUGGUGAACGUCUGGAUGAUUAAUAGUCUGACACU
.........(.(.(..(............(.......)............)).))..............................................................................
>AANG01443872.1/432-299
ACUGCCCCCAGAGGCGUUGCAGGUGUGGCUGCGUUUGUGUCACAUUUGUGUCAUUCGGCGGCAGAGAGAAGGGAGGCUUGUCUACGCCCAGCGUUCCGGCUGCAGAACGUCUGGAUGAUUAAUAGCCUGACAGC
.........(.(.(..(............(.......)............))..))..............................................................................

>AL929577.9/115568-115437
UCUGCCCCUACAGGCGUUGCAGGUGUGGCUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUAUGUCUACGCUCAGUGUUCUGACCUGUGAACAUCUGAAUGAUUAGUAGCCUAACAUU
.................................................................................(..(..................................))...........
....................................................................(.(..........(..(..................................))....)).....
................................................................(.(..............(..(............(........)............))........)).
>AANG01443872.1/432-299
ACUGCCCCCAGAGGCGUUGCAGGUGUGGCUGCGUUUGUGUCACAUUUGUGUCAUUCGGCGGCAGAGAGAAGGGAGGCUUGUCUACGCCCAGCGUUCCGGCUGCAGAACGUCUGGAUGAUUAAUAGCCUGACAGC
.............(..(.................................))..................................................................................
.........(.(.(..(.................................))..))..............................................................................
.........(.(.(..(............(.......)............))..))..............................................................................
>AK090585.1/512-643
ACUGCCCCUAGAGGCGUUGCAGCUGUGGCUGCCGUGUCACAUCUGUGUCAUUAGGUGGCAGAGAUUAGAGAGGCUAUGUCUACGCUCAGCGUUCUGCCCCGUGAACGUUUGAAUGUUUGAUAGUCUCACACU
.............(..(..............................))...................................................................................
.........(.(.(..(..............................)).))................................................................................
.........(.(.(..(...........(......)...........)).))................................................................................
>AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
.............(..(..............................))..............................................................................................
.........(.(.(..(..............................)).))...........................................................................................
.........(.(.(..(............(....)............)).))...........................................................................................
>BC042667.1/532-663
ACUGCCCCUAGAGGCGUUGCAGCUGUGGCUGCCGUGUCACAUCUGUGUCAUUAAGUGGCAGAGAUUAGAGAGGCUAUGUCUACGCUCAGCGUUCUGCCCCGUGAACGUUUGAAUGUUUGAUAGUCUCACACU
.............(..(..............................))...................................................................................
.............................................................(.(...........(..(........................................)).........))
.............................................................(.(...........(..(..............(........)................)).........))
>AAFR03005638.1/59378-59246
AUUGCCCCUAGAGGCGUUACAAAUUUGGCUGCUGUGCCUCAUUUGUGUCAGUAGGUGGCAAAGAGAAAGAGACUAUGUCUACGCUCAGUGCUCUGACCCAGUGAGCACUCAGAAUGAUUAAUAGCCUGACACU
.............(..(..............................))....................................................................................
.........(.(.(..(..............................)).)).................................................................................
.........(.(.(..(............(....)............)).)).................................................................................
>AAPY01364388.1/271-141
CCUGCCCCUAGAGGCGUUGCAGAUGUGGCUGCUGUGUCACAGCUGCGUCAGUAGUGGGCAGAGAGCAAGAGGCUAUGUCUACGCUCAGUGUUCUGACUCGUGAACAUUUGAAUGAUUAGUAGCCUCACACU
.............(..(..............................))..................................................................................
.........(.(.(..(..............................)).))...............................................................................
.........(.(.(..(............(....)............)).))...............................................................................
>BX936366.8/102933-103064
CCUGCCCCUAGAGGUGUUUUAGGUGUGGCUGCAGUGUCAUAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUGUGCCUAUGCUCACUGUUCAGACCAUUGAACAUUUGAAUGAUCAGUAGCCUAACAUU
.............(..(..............................))...................................................................................
.........(.(.(..(..............................)).))................................................................................
.........(.(.(..(...........(......)...........)).))................................................................................
>AL671963.9/45705-45574
CCUGCCUCUGGAAGCAUUGCAGAUGUGACUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAGAGAGGCUAUGUCUACGCUCAGUGUUCUAACCGAUGGGCAUCUGAAUGGUUAUUAGCCUAACGUG
.................................................................................(..(...........................))..................
....................................................................(.(..........(..(...........................))...........).)....
................................................................(.(..............(..(.............(....)........))...............)).
>AC160983.2/170827-170958
CCUUCCCCUAGAGGCUUUGCAGGUGUGGCUGCUCUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGUAGAGAAGUUAUGUCUAUGCUCAGUGUUUUGACCUGUGAAUAUCUGAAUGAUUAGUAGCCUAACAAU
...........................................................................(..(.............................))......................
..................................................................(.(......(..(.............................))......))..............
..................................................................(.(......(..(............(...)............))......))..............
>AL663042.5/46926-46793
CCUGCCCCUAGAGGUGUUGCAUGUAUGGCUGCUGUGUCAUGUGUGCAUCAGUAGGUGGCAGAGAGGAGAGAGUCUAUGUUCAGGCUCAGUGUUCUGGCCUAUGGACUUCUCUGAAUGAUUAGUGGCCUGACACA
.............(..(..............................)).....................................................................................
.........(.(.(..(..............................)).))..................................................................................
.........(.(.(..(............(....)............)).))..................................................................................
>AC102195.14/77372-77241
CCUGCCCCUAGAGGCCUUGCAGGUGUGGCUGCUGUGUCCCAUGUGGGUCAAUAGGUGGCAGAGAGGAGAAAGGCUAUGUCUUCGGUCUGUGUUCUGACCUAGGAACAUCUGAAUGAUUAGUAACCUAACAUC
...........................................................................(..(.......................................).)...........
..................................................................(.(......(..(.......................................).).....))....
..................................................................(.(......(..(................(....).................).).....))....
>AANN01080924.1/908-778
CCUGCCCCUAGAGGCGUUACAGAUGUGACUGCUGUGUCACAUGUGUGUCAAUAGGUGGCAGAGAGAAGAGAGGCUUGUCUACGUCCAGUGCUCUGACCUGUGAGCCACUGGGUGAUUGAUAGUCUGACACU
.............(..(..............................))..................................................................................
.........(.(.(..(..............................)).))...............................................................................
.........(.(.(..(............(....)............)).))...............................................................................
>AC044804.4/242661-242530
UUUGUCCCUAGAGGAGUUGCAGGUGUGGCUGCUGUGUCACAUGGGUGUCAGUAGGUGGCAGAGAGGAGAGAGGUUAUGUCUAUGCUCAGUGUUCUGAUCUGUGAACCUCUGAAUGAUAGGUAGUUUAACAUA
...........................................................................(..(......................)).............................
..................................................................(.(......(..(......................))......)).....................
..................................................................(.(......(..(..........(..)........))......)).....................
>AAFC03086501.1/28639-28770
ACUGCCCCUAGAGGCGCUGCAGGCGUGGCUGCCGUGUCACGUCUGCGUCAUGAGGUGGCAGAGAGGAAAGAGGCUCGGUCUACGCCCAGUGUUCUGGCCGGUGGACAUCUGGAUGAUUGAUAGUCUGACACU
.............(..(.............................))....................................................................................
.........(.(.(..(.............................))..))................................................................................
.........(.(.(..(...........(......)..........))..))................................................................................
>AAWR02025983.1/946-1076
ACUGCCCCUAGAGGCGUUACAGAUGUGGCUGCGGUGUCACAUUUGUGUCAUUGGGUGGCAGAGAGAAGAGAGGCUUGUCUACGCUCAGUGUUCUGGCCUGUGGACGCCUGGAUGAUGAAUAGUCUGACACU
.............(..(..............................))..................................................................................
.........(.(.(..(..............................))..))..............................................................................
.........(.(.(..(...........(......)...........)).))...............................................................................
>ABDC01163242.1/9845-9714
ACUUCUCCUAGAGGCAUUGCAGAUGUGGGUGCUGUGUCACAUUUGUGUCAUUAGGUGACAGAGAGAGGAGAGGCUAUGUCUACAUUCAGUGUUCUGACCCAUGAAUGUUUGAAUGAUUAAUAGUCUGCCAUA
.................................(..(...............................).).............................................................
....................................................................(.(....(..(................................).)...........)).....
....................................................................(.(....(..(............(......)............).)...........)).....
>AACN010677500.1/623-491
ACUGCCCCCAGAGGCGUUGCAGGUGUGGCUGCAUCUGUGUCACAUUUGUGUCAUUGGGUGGCAGAAAGAAGAGAGGCUUAUCUACGCCCAGUGUUCAGCUGGUGAACGUCUGGAUGAUUAAUAGUCUGACACU
.............(..(................................))..................................................................................
.........(.(.(..(.................................)).))..............................................................................
.........(.(.(..(............(.......)............)).))..............................................................................
>AC147162.2/137638-137507
ACUGCCCCUAGAGGCAUUGCAGAUAUGGCGGCUGUGUCACAUGUGUGCCAGUAGGUGGCAGAGAGGAGAAAGGUUAUGUCUAUGCUCAAUGUUCUGAUCUAUGGACAUCUGAAUAAUUAGUAGUCUAACAAU
.................................................................................(..(..................................))...........
................................................................(.(..............(..(..................................))....)..)...
>AC116747.10/162742-162873
CCUGCCCCUACCAGCAUUGCAGUUGUGGCUGCUCUGUUGCAUAUGUGUCAGCAGGUGGCAGAGAGGAGAGAGGCUGUGUCUAUGCUCAGUGUCCUGACCUGUGAACAUCUGAAUGAUUAGUAACCUCACAUU
...........................................................................(..(.........................................))..........
.............................................................(.(...........(..(.........................................))........))
>AL732311.13/50067-49936
CCUGCUCCUAGAGGCGUUGCAGGUGUGGCUGCUGUGUCACAUGUGCGUCAGUAGGUGGCAGAGAGAAAAGAGGCUAUGUCUACGCUCAGUGUUCUGCCCUGUGAACGUCUGAAUGAUUUGUAGCCUGACAAC
...........................................................................(..(....................................)....)...........
...............................................................(.(.........(..(....................................)....).....)...).
>AC120020.9/24687-24556
CCUGCCCCUAGAGGCGUUGCAGGUGUGGCUGCUGUGUCACAUGUGUGUCAGUAGGUGGCAGAGAGGAAAGAGGCUAUGUCUACGCUCAGUGUUCUGAUCUGUGAACAUCUGAAUGAUUAGUAGCCAAACAUU
.................................................................................(..(..................................))...........
....................................................................(.(..........(..(..................................))....)).....
>AC159274.2/136463-136332
ACUGCCCCUAGAGGUUUUGCAGGUGUGGCUGCUGUGUCACAUGUGCAUCAGUAGGAGGCAGAGAGAAGAGAGGCUAUGCCUGUGCUCAGUGUUCUGACCUGUGAACAACUGAAUCAUUAGUAGCCUAACAGU
.................................................................................(..(...........................).).................
...............................................................(.(.........(..(........................................)).........))
>AC125262.9/82422-82292
CCUGCCCCUAGAAGCACUGUACGUGUGGCUGCUGUGUCACCGGUGUGUCAGUAGGUGGCAGAGAGGAGACAGGCUGUGCCUAAGCUCAGUGUUCUGACCUUUGAACAGCUGAAUGAUGGUAGCCUGACAUU
...........................................................................(..(......................................).)...........
................................................................(.(........(..(......................................).)........)).
>AAHX01069608.1/34817-34686
CCUGCCCCUAGAGGCACUGCAGGUGUGGCUGCUGUGUCACAUGUGCGUCAGUAGGUGGCAGAGAGGAAAGAGGCUAUGUCUACGCUCAGUGUUCUGACCUGUGAACAUUUGAAUGAUUAGUAGCCUAAUAUU
...........................................................................(..(.......................................).)...........
................................................................(.(........(..(.......................................).)........)).
>AAIY01268469.1/912-1041
ACUGCCCCUAGAAGCAUUGCAGCGUGGCCACCCUGCCACAGCUGUGUCAUUAGAGGGCAAAGAGAAGAGGGGCUAUGUCUAGGCUCAGGGGUCUGACGUGAACCACCUGACUGACUGCUAGCCCCACAGU
.....................(..(............))...........................................................................................
>AC139319.6/13901-14032
UUUGCCUCUAGAGGUAUUGCAGGUAUGGCUGCUGUGUCACAUGUGCAUCAAGAGGUGGCAGAGGGGAGAAAGGCUAUGUCUACACUCAGUGUUCUAACAUGUGAACAUCUGAAUGGUCAGUAGUCUAACAUU
..........................................(..(..................................................))..................................
>AC160393.2/162851-162720
CUUGCUCCUAAAGGCAUUGCAGGUGUGACUGCUGGGUCACCUGUACGUCAGUGGGUGGCAGAGUAGAGAGAGGCUAUGUCUAUACUCAGUGUUCUGACCUUCGAGCAUCUGAAUGAUUAGUAGCCUAACACU
......................(..(............))............................................................................................
>AC156631.2/55855-55724
CCUGCUCCUAGAGGCAUUGUAGGUGUGGCUGCUGUGUCACAUGCACGUCGGUAGGUGGCAGAGAGGAGAGAGGCUACAUCUACACUCAGUGUUCUGGCCUGUGAAUGUCUGCAUGAUUAGUAGCCUAAUAUU
......................(..(............))............................................................................................
>AL772346.5/72472-72603
CCUGCCCAUAGAGAUAUUGCAGGUUUGGCUGCUGUGUCACAUGUGCGUCAGUAGGUGGCAGAGGGGAGAGAGGCUAUGUCUAUGCUCAGUGUUCAGAUCUAGGAACUUCUGAAUGUUUCUUAGCCUAACACU
........................................................................................(..(....................)..)................
>AAYZ01571100.1/456-325
GCUGCCCCUCGAGGCGUUGCAGGUGCGGCUGCUGUGCCGCACCUGUGUCAGCAGGUGGCAGAGAGCAGUGCGGCUACGUCUACGCUCCGCGCCCUGGCACGUGGGCUUCGGAAUGAUUAGUAGGCGGACAGC
.............(..(..............................))...................................................................................
>AAPE02023258.1/7569-7440
ACUGCCCCUAGAGGCAUUGUAGGUGUGGCUGCCAUGUUGCACCUGCGUCAUUAGGUGGCAGAGAGCAGAGAGGCUUGCCUACGCCCAGCAUCCUGGCUGUGGGCGCCUGGAUGGUUGACGGCCUGGCACU
......................................................................................................(..(.......))...............
>AAPN01114604.1/4824-4957
GGUGCCCCUCGAGGCGUUGCAGAUGUGGCUGCGGUGCCCCAUUUGUGUCAUGAGGUGGCAGAGAGGAUAAGGCUAUGUCUACGCUCCGUGUUCAAAAAUUUGUGAGCACGCAGAAUGAUUAAUAGCCUGACAGU
.............(..(..............................)).....................................................................................
>AC124719.3/60776-60645
ACUGCCCCUAGAGGCUUUGCAGGUGUGGCCGCUGUGUCAUAUGUGUGUCAAUAGGUGGCAGGGAGGAGAGUGACUAUGUCUAUGCUCAGUGUUCUGACCCAUGAACAUCAGAGUGAUUAGCAGCCUAACAUC
........................................................................................(..(....................)..)................

ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio
1 R(YG(Y)) < 0.001 11.3
AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
...................................................................................................1...........................................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3.........4...
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
2 R(G(A)) < 0.001 1.05
AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
...................................................................................................1...........................................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3.........4...
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
3 (.NU.) < 0.001 1.19
AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
...................................................................................................1...........................................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3.........4...
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio

NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio
1 (.GNYRU.) < 0.001 10.6
AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
...................................................................................................1...........................................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3.........4...
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
2 G(YG(U)) < 0.001 21.3
AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
...................................................................................................1...........................................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3.........4...
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
3 .N. (URB) < 0.001 0.84
4 N(AR(Y)) (URB) < 0.001 0.104
5 U(A(U)()) 0.0335 4.67
AAWZ02037419.1/5349-5207
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
CUUGCCCCCAGAGGCGUUGCAGACACGGCUGUCGUGCCAUGUUUGCGUCAUUGGGUGGCAAAGAGGAAAGAAAGGCUAUGUCUACGCUCAGUGCUCUGAAAUGAAAAACCGUGGGCACUCAGAAUGAUUUGUAGCCUGACAAA
...................................................................................................1...........................................
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2.........3.........4...
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).