D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major
D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences
J. Mol. Biol., 435 (2023)

microRNA mir-146   (Rfam: RF00691)

Seed sequences
All NCMs (CSV file) (all) positive sequences (all) negative sequences (random) (training) positive sequences (training) negative sequences (testing) positive sequences (testing) negative sequences 

Options
Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN
Rfam
D-ORB
Augmented
(NR()U)
Y(U(N))
(.Y.)
(.U.().Y.)
100.0
100.0
100.0
100.0
Y(U(N))
(.Y.)
(.U.().Y.)

% of positive sequence with ORB





Deep neural network:

5-fold cross-validation: 99.4 %
(± 0.198 %)
Decision tree:

5-fold cross-validation: 87.4 %
(± 8.24 %)
D-ORB structure
D-ORB structure decision tree:

5-fold cross-validation: 93.2 %
(± 3.84 %)
of AAGW02060858.1/19148-19237
AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
(((((((((.((((((..(((((((((.((.(((((((((((((..))))))))))))))).))))))))).)))))).)).)).)))))
.........1.........2.........3.........4.........5.........6.........7.........8.........9
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890

abstract shape: ()

Number of sequences
Structure ORBs (out of 33) (%)
1 (NR()U)
 31 93.9
>AANG01052378.1/2905-2994
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUAAGCUCAAGCAAAUGGCCUAGGGACUCAGUUCUGGUGCUCGGCUGUGCUAU
...............(..(...................................................).).................
>AABR05018978.1/7743-7657
GUGUAUCCUCAGCUCUGAGAACUGAAUUCCAUGGGUUAUAGCAAUGUCAGACCUGUGAAGUUCAGUUCUUUAGCUGGGAUAGCUCUA
..............(..(..................................................).)................
>AAYZ01153033.1/3261-3350
UUGGUUGCCUGGCUCUGAGAACUGAAUUCUAUAGGCCGUGAGCUCUAGCAGAUACCCUAGGGACUCAGUUCUGGUGCCUGGCUGGGCUGC
...............(..(...................................................).).................
>AANH01005121.1/10850-10759
AUGAGUGUUGUACUAUGAGAACUGAAUUCCAUAGAUGGUGGCAUCUUCAGGUGUCAUCUAUGGGCUCAGUUCUUUUGGUACGGUACUAAUUU
.......................(..(.....................................).).........................
>AAFC03000506.1/621-535
GUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUAGGUUGUGUCAGUGUCAGACCUGUGAAGUUUAGUUCUUUAGCUGGGAUAUCUCUA
..............(..(..................................................).)................
>AAGU03026742.1/175862-175773
CUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAACUCUAGCAGAUGCCCUAGGAACUCAGUUCUGGUGCCCGGCUGUGCUGC
...............(..(...................................................).).................
>CAAA01220328.1/4488-4574
GUGUAUCCCCAGCUCUGAGAACUGAAUUCCAUGGGUUAUAUCAAUGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAGCUCUG
..............(..(..................................................).)................
>AC008388.7/35916-36002
GUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAGUGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUG
..............(..(..................................................).)................
>CAAB02001937.1/426747-426656
UAGAGUGCUCCGCCAUGAGAACUGAAUUCCAUAGAUGGUGACAUUUGUAUGCUUCAUCUAUGGGCUCAGUUCUUUUGGCUCGGUACUGUCCA
.......................(..(.....................................).).........................
>AAIY01333564.1/1864-1775
UUUGGUCCCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGAGCUCAGUUCUGGUGCCCGGCAGGCCGUG
...............(..(...................................................).).................
>AAPN01152393.1/27352-27260
CAGUACGCUCAGCUUUGAGAACUGAAUUCCACGGGUUGUGAUUGCAACUCUGACAGACCCGUGGGGCUCAGUUCUUGAGCUGGGGUACCUCUG
...............(..(......................................................).).................
>BX005397.20/24549-24637
CUGAGCUCUUGGCUUUGAGAACUGAAUUCCAAGGGUGUCUGCUUUAUAUUCAGCCCACGGAGUUCAGUUCUUAAGUUUGGAUGCUCACG
..............(..(....................................................).)................
>AAFR03025019.1/59826-59741
GCAUCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCAUGCAAAUGCCCUAGGAAGUCAGUUCUGGAGUCCGGUGACCUCGA
...........(..(...................................................).).................
>AADN03004970.1/43219-43309
CUGGCUGCUUGGCUUUGAGAACUGAAUUCCAUAGGCGUUAAAGCAUCCAAAAAUGCCCUAUGGAUUCAGUUCUGCAGUUGGGCAGCAAAUA
...............(..(....................................................).).................
>BAAE01103753.1/1540-1630
AGAAGUGCUCUACUAUGAGAACUGAAUUCCAUAGAUGGUAGCUUUUCUAGGUGUCAUCUAUGGGCUCAGUUCUUUUGGCAUGGUACUGGUU
.......................(..(.....................................).)........................
>AAPE02031084.1/12272-12361
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAC
...............(..(...................................................).).................
>AAVX01275541.1/618-713
UGGCAGCUCCAGCUGUGAGAACUGAAUUCCAUGGGCUGGUCACGCAGUUUUCUUCCUCAGUCCAUAGUAGUCAGUUCUUCCGUUUGGCUGCUUGAU
..............(..(...........................................................).)................
>AAFR03012754.1/25474-25388
UUGUAUCUUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUCUUUGUAUCAGACCUAUGAAACUCAGUUCUUCAGCUGGAAUAUCUCUG
..............(..(..................................................).)................
>ABDC01238493.1/6154-6243
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGUGAAUGCCCUAGGGACUCAGUUCUGGUGCCUGGCUGUGCCAC
...............(..(...................................................).).................
>AADN03004045.1/26172-26268
UUGGCAGUUCCCAGCUCUGAGAACUGAAUUCCAUGGACUGGUUUCAAUUCCAUGCGUUCAGUCCAUGGUAUUCAGUUCUCUAGCUUGGCUGCAUCAA
.................(..(........................................................).).................
>AADN03006667.1/347156-347063
GUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUAAUUGAAUCCUUUGUCAGACCCAUGGGGCUCAGUUCUUCAGCUUGGAUAUUUCUG
..............(..(.........................................................).)................
>AAPY01213417.1/4703-4792
CCGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCCAGCAGAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGCGCAGU
...............(..(...................................................).).................
>AAPN01141106.1/3079-3169
AUGCGGUGCUUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGUUGAUGAGGAUGCCCUAGGGAUUCAGUUCCACAGCCCAGCAACCCACA
........................(..(....................................).)........................
>AANN01666952.1/959-1048
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAACGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAU
...............(..(...................................................).).................
>AAWZ02005630.1/5439-5350
AUGGUUGCCUAGCUCUGAGAACUGAAUUCCAUAGGCUUUAGAAUAAUUGAAACGCCCCGUGGAUUCAGUUCUACAGCUAGGCAGCAACUA
...............(..(...................................................).).................
>AAGV020197496.1/364-278
GUGUAUCCCCAGCUUUGAGAACUGAAUUCCAUGGGUUUUCUCAAUGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUG
..............(..(..................................................).)................
>AADA01134315.1/4724-4812
UUGGCCACCUGGCACUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAUGCCCUGUGGACUCAGUUCUGGUGCCCGGCAGUGCUAC
...............(..(..................................................).).................
>CAAE01015006.1/213889-213798
AGGAGUGCUCUGCUGUGAGAACUGAAUUCCAUAGAUGGUGACAUUUGUAUGUGUCAUCUAUGGGCUCAGUUCUUUUGGCUUGGUACUGUUUU
.......................(..(.....................................).).........................
>CT025772.15/118748-118837
UUGAGCACUUUUCCCUGAGAACUGAAUUCCAUAGAUGGUGUUCAUGAAAAGUUCAUCUAUGGGCUCAGUUCUUCUGGCAAUCUGUUUAAU
..............(..(.....................................................).)................
>AAEX03015486.1/23854-23943
CUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUUGAGCAAACAGCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUCU
...............(..(...................................................).).................
>AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
...............(..(...................................................).).................
2 (NR()U)
Y(U(N))
 23 69.7
>CT025772.15/118748-118837
UUGAGCACUUUUCCCUGAGAACUGAAUUCCAUAGAUGGUGUUCAUGAAAAGUUCAUCUAUGGGCUCAGUUCUUCUGGCAAUCUGUUUAAU
..............(..(........(.(...............................).)........).)................
>AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
...............(..(.......(.(...............................).).......).).................
>AAVX01275541.1/618-713
UGGCAGCUCCAGCUGUGAGAACUGAAUUCCAUGGGCUGGUCACGCAGUUUUCUUCCUCAGUCCAUAGUAGUCAGUUCUUCCGUUUGGCUGCUUGAU
..............(..(........(.(.....................................).)........).)................
>AC008388.7/35916-36002
GUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAGUGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUG
..............(..(........(.(............................).)........).)................
>AAWZ02005630.1/5439-5350
AUGGUUGCCUAGCUCUGAGAACUGAAUUCCAUAGGCUUUAGAAUAAUUGAAACGCCCCGUGGAUUCAGUUCUACAGCUAGGCAGCAACUA
...............(..(.......(.(...............................).).......).).................
>AADN03004045.1/26172-26268
UUGGCAGUUCCCAGCUCUGAGAACUGAAUUCCAUGGACUGGUUUCAAUUCCAUGCGUUCAGUCCAUGGUAUUCAGUUCUCUAGCUUGGCUGCAUCAA
..........(..(..............(.(....................................).).............).)...........
>AADN03006667.1/347156-347063
GUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUAAUUGAAUCCUUUGUCAGACCCAUGGGGCUCAGUUCUUCAGCUUGGAUAUUUCUG
........(..(..............(.(...................................).).............).)...........
>AADN03004970.1/43219-43309
CUGGCUGCUUGGCUUUGAGAACUGAAUUCCAUAGGCGUUAAAGCAUCCAAAAAUGCCCUAUGGAUUCAGUUCUGCAGUUGGGCAGCAAAUA
...............(..(.......(.(................................).).......).).................
>AADA01134315.1/4724-4812
UUGGCCACCUGGCACUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAUGCCCUGUGGACUCAGUUCUGGUGCCCGGCAGUGCUAC
...............(..(.......(.(...............................)).......).).................
>ABDC01238493.1/6154-6243
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGUGAAUGCCCUAGGGACUCAGUUCUGGUGCCUGGCUGUGCCAC
...............(..(.......(.(...............................).).......).).................
>AAEX03015486.1/23854-23943
CUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUUGAGCAAACAGCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUCU
...............(..(.......(.(...............................).).......).).................
>AAYZ01153033.1/3261-3350
UUGGUUGCCUGGCUCUGAGAACUGAAUUCUAUAGGCCGUGAGCUCUAGCAGAUACCCUAGGGACUCAGUUCUGGUGCCUGGCUGGGCUGC
...............(..(.......(.(...............................).).......).).................
>AAPE02031084.1/12272-12361
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAC
...............(..(.......(.(...............................).).......).).................
>AAFR03025019.1/59826-59741
GCAUCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCAUGCAAAUGCCCUAGGAAGUCAGUUCUGGAGUCCGGUGACCUCGA
...........(..(.......(.(...............................))........).).................
>AAPN01152393.1/27352-27260
CAGUACGCUCAGCUUUGAGAACUGAAUUCCACGGGUUGUGAUUGCAACUCUGACAGACCCGUGGGGCUCAGUUCUUGAGCUGGGGUACCUCUG
..............(..(........(.(..................................).)........).)................
>AANG01052378.1/2905-2994
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUAAGCUCAAGCAAAUGGCCUAGGGACUCAGUUCUGGUGCUCGGCUGUGCUAU
...............(..(.......(.(...............................).).......).).................
>AABR05018978.1/7743-7657
GUGUAUCCUCAGCUCUGAGAACUGAAUUCCAUGGGUUAUAGCAAUGUCAGACCUGUGAAGUUCAGUUCUUUAGCUGGGAUAGCUCUA
..............(..(........(.(............................).)........).)................
>CAAA01220328.1/4488-4574
GUGUAUCCCCAGCUCUGAGAACUGAAUUCCAUGGGUUAUAUCAAUGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAGCUCUG
..............(..(........(.(............................).)........).)................
>AANN01666952.1/959-1048
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAACGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAU
...............(..(.......(.(...............................).).......).).................
>AAIY01333564.1/1864-1775
UUUGGUCCCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGAGCUCAGUUCUGGUGCCCGGCAGGCCGUG
...............(..(.......(.(...............................))........).).................
>BX005397.20/24549-24637
CUGAGCUCUUGGCUUUGAGAACUGAAUUCCAAGGGUGUCUGCUUUAUAUUCAGCCCACGGAGUUCAGUUCUUAAGUUUGGAUGCUCACG
..............(..(........(.(..............................).)........).)................
>AAFC03000506.1/621-535
GUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUAGGUUGUGUCAGUGUCAGACCUGUGAAGUUUAGUUCUUUAGCUGGGAUAUCUCUA
..............(..(........(.(............................).)........).)................
>AAPY01213417.1/4703-4792
CCGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCCAGCAGAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGCGCAGU
...............(..(.......(.(...............................).).......).).................
3 (NR()U)
Y(U(N))
(.Y.)
 17 51.5
>AAPE02031084.1/12272-12361
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAC
...............(..(.......(.(..............(..).............).).......).).................
>AAEX03015486.1/23854-23943
CUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUUGAGCAAACAGCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUCU
...............(..(.......(.(..............(..).............).).......).).................
>AAPY01213417.1/4703-4792
CCGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCCAGCAGAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGCGCAGU
...............(..(.......(.(..............(..).............).).......).).................
>AADA01134315.1/4724-4812
UUGGCCACCUGGCACUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAUGCCCUGUGGACUCAGUUCUGGUGCCCGGCAGUGCUAC
...............(..(.......(.(..............(..).............)).......).).................
>AAWZ02005630.1/5439-5350
AUGGUUGCCUAGCUCUGAGAACUGAAUUCCAUAGGCUUUAGAAUAAUUGAAACGCCCCGUGGAUUCAGUUCUACAGCUAGGCAGCAACUA
...............(..(.......(.(.............(...).............).).......).).................
>AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
...............(..(.......(.(..............(..).............).).......).).................
>AAPN01152393.1/27352-27260
CAGUACGCUCAGCUUUGAGAACUGAAUUCCACGGGUUGUGAUUGCAACUCUGACAGACCCGUGGGGCUCAGUUCUUGAGCUGGGGUACCUCUG
..............(..(........(.(..............(.....).............).)........).)................
>BX005397.20/24549-24637
CUGAGCUCUUGGCUUUGAGAACUGAAUUCCAAGGGUGUCUGCUUUAUAUUCAGCCCACGGAGUUCAGUUCUUAAGUUUGGAUGCUCACG
..............(..(........(.(..............(..)............).)........).)................
>AANN01666952.1/959-1048
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAACGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAU
...............(..(.......(.(..............(..).............).).......).).................
>AAVX01275541.1/618-713
UGGCAGCUCCAGCUGUGAGAACUGAAUUCCAUGGGCUGGUCACGCAGUUUUCUUCCUCAGUCCAUAGUAGUCAGUUCUUCCGUUUGGCUGCUUGAU
..............(..(........(.(..............(........).............).)........).)................
>ABDC01238493.1/6154-6243
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGUGAAUGCCCUAGGGACUCAGUUCUGGUGCCUGGCUGUGCCAC
...............(..(.......(.(..............(..).............).).......).).................
>AAIY01333564.1/1864-1775
UUUGGUCCCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGAGCUCAGUUCUGGUGCCCGGCAGGCCGUG
...............(..(.......(.(..............(..).............))........).).................
>AAYZ01153033.1/3261-3350
UUGGUUGCCUGGCUCUGAGAACUGAAUUCUAUAGGCCGUGAGCUCUAGCAGAUACCCUAGGGACUCAGUUCUGGUGCCUGGCUGGGCUGC
...............(..(.......(.(..............(..).............).).......).).................
>AAFR03025019.1/59826-59741
GCAUCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCAUGCAAAUGCCCUAGGAAGUCAGUUCUGGAGUCCGGUGACCUCGA
...........(..(.......(.(..............(..).............))........).).................
>AADN03004970.1/43219-43309
CUGGCUGCUUGGCUUUGAGAACUGAAUUCCAUAGGCGUUAAAGCAUCCAAAAAUGCCCUAUGGAUUCAGUUCUGCAGUUGGGCAGCAAAUA
...............(..(.......(.(..............(...).............).).......).).................
>AANG01052378.1/2905-2994
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUAAGCUCAAGCAAAUGGCCUAGGGACUCAGUUCUGGUGCUCGGCUGUGCUAU
...............(..(.......(.(..............(..).............).).......).).................
>CT025772.15/118748-118837
UUGAGCACUUUUCCCUGAGAACUGAAUUCCAUAGAUGGUGUUCAUGAAAAGUUCAUCUAUGGGCUCAGUUCUUCUGGCAAUCUGUUUAAU
..............(..(........(.(..............(..).............).)........).)................
4 (NR()U)
Y(U(N))
(.Y.)
(.U.().Y.)
 14 42.4
>AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AADA01134315.1/4724-4812
UUGGCCACCUGGCACUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAUGCCCUGUGGACUCAGUUCUGGUGCCCGGCAGUGCUAC
........(.(....(..(.......(.(..............(..).............)).......).)....).)..........
>AAIY01333564.1/1864-1775
UUUGGUCCCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGAGCUCAGUUCUGGUGCCCGGCAGGCCGUG
........(.(....(..(.......(.(..............(..).............))........).)....).)..........
>AAYZ01153033.1/3261-3350
UUGGUUGCCUGGCUCUGAGAACUGAAUUCUAUAGGCCGUGAGCUCUAGCAGAUACCCUAGGGACUCAGUUCUGGUGCCUGGCUGGGCUGC
........(.(....(..(.......(.(..............(..)..............)).......).)....).)..........
>AAPE02031084.1/12272-12361
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAC
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>CT025772.15/118748-118837
UUGAGCACUUUUCCCUGAGAACUGAAUUCCAUAGAUGGUGUUCAUGAAAAGUUCAUCUAUGGGCUCAGUUCUUCUGGCAAUCUGUUUAAU
......(..(....(..(........(.(..............(..).............).)........).)....)...).......
>AAEX03015486.1/23854-23943
CUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUUGAGCAAACAGCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUCU
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AAPY01213417.1/4703-4792
CCGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCCAGCAGAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGCGCAGU
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AANG01052378.1/2905-2994
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUAAGCUCAAGCAAAUGGCCUAGGGACUCAGUUCUGGUGCUCGGCUGUGCUAU
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AAFR03025019.1/59826-59741
GCAUCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCAUGCAAAUGCCCUAGGAAGUCAGUUCUGGAGUCCGGUGACCUCGA
....(.(....(..(.......(.(..............(..).............))........).)....).)..........
>AADN03004970.1/43219-43309
CUGGCUGCUUGGCUUUGAGAACUGAAUUCCAUAGGCGUUAAAGCAUCCAAAAAUGCCCUAUGGAUUCAGUUCUGCAGUUGGGCAGCAAAUA
........(..(...(..(.......(.(..............(..)...............)).......).)...)..)..........
>BX005397.20/24549-24637
CUGAGCUCUUGGCUUUGAGAACUGAAUUCCAAGGGUGUCUGCUUUAUAUUCAGCCCACGGAGUUCAGUUCUUAAGUUUGGAUGCUCACG
........(.(...(..(........(.(..............(..)............).)........).)...).)..........
>AANN01666952.1/959-1048
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAACGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAU
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AAPN01152393.1/27352-27260
CAGUACGCUCAGCUUUGAGAACUGAAUUCCACGGGUUGUGAUUGCAACUCUGACAGACCCGUGGGGCUCAGUUCUUGAGCUGGGGUACCUCUG
.......(.(....(..(........(.(..............(.....).............).)........).)....)....)......

>AANG01052378.1/2905-2994
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUAAGCUCAAGCAAAUGGCCUAGGGACUCAGUUCUGGUGCUCGGCUGUGCUAU
...............(..(...................................................).).................
...............(..(.......(.(...............................).).......).).................
...............(..(.......(.(..............(..).............).).......).).................
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AAYZ01153033.1/3261-3350
UUGGUUGCCUGGCUCUGAGAACUGAAUUCUAUAGGCCGUGAGCUCUAGCAGAUACCCUAGGGACUCAGUUCUGGUGCCUGGCUGGGCUGC
...............(..(...................................................).).................
...............(..(.......(.(...............................).).......).).................
...............(..(.......(.(..............(..).............).).......).).................
........(.(....(..(.......(.(..............(..)..............)).......).)....).)..........
>AAIY01333564.1/1864-1775
UUUGGUCCCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGAGCUCAGUUCUGGUGCCCGGCAGGCCGUG
...............(..(...................................................).).................
...............(..(.......(.(...............................))........).).................
...............(..(.......(.(..............(..).............))........).).................
........(.(....(..(.......(.(..............(..).............))........).)....).)..........
>AAPN01152393.1/27352-27260
CAGUACGCUCAGCUUUGAGAACUGAAUUCCACGGGUUGUGAUUGCAACUCUGACAGACCCGUGGGGCUCAGUUCUUGAGCUGGGGUACCUCUG
...............(..(......................................................).).................
..............(..(........(.(..................................).)........).)................
..............(..(........(.(..............(.....).............).)........).)................
.......(.(....(..(........(.(..............(.....).............).)........).)....)....)......
>BX005397.20/24549-24637
CUGAGCUCUUGGCUUUGAGAACUGAAUUCCAAGGGUGUCUGCUUUAUAUUCAGCCCACGGAGUUCAGUUCUUAAGUUUGGAUGCUCACG
..............(..(....................................................).)................
..............(..(........(.(..............................).)........).)................
..............(..(........(.(..............(..)............).)........).)................
........(.(...(..(........(.(..............(..)............).)........).)...).)..........
>AAFR03025019.1/59826-59741
GCAUCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCAUGCAAAUGCCCUAGGAAGUCAGUUCUGGAGUCCGGUGACCUCGA
...........(..(...................................................).).................
...........(..(.......(.(...............................))........).).................
...........(..(.......(.(..............(..).............))........).).................
....(.(....(..(.......(.(..............(..).............))........).)....).)..........
>AADN03004970.1/43219-43309
CUGGCUGCUUGGCUUUGAGAACUGAAUUCCAUAGGCGUUAAAGCAUCCAAAAAUGCCCUAUGGAUUCAGUUCUGCAGUUGGGCAGCAAAUA
...............(..(....................................................).).................
...............(..(.......(.(................................).).......).).................
...............(..(.......(.(..............(...).............).).......).).................
........(..(...(..(.......(.(..............(..)...............)).......).)...)..)..........
>AAPE02031084.1/12272-12361
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAC
...............(..(...................................................).).................
...............(..(.......(.(...............................).).......).).................
...............(..(.......(.(..............(..).............).).......).).................
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AAPY01213417.1/4703-4792
CCGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCCAGCAGAUGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGCGCAGU
...............(..(...................................................).).................
...............(..(.......(.(...............................).).......).).................
...............(..(.......(.(..............(..).............).).......).).................
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AANN01666952.1/959-1048
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAACGCCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUAU
...............(..(...................................................).).................
...............(..(.......(.(...............................).).......).).................
...............(..(.......(.(..............(..).............).).......).).................
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AADA01134315.1/4724-4812
UUGGCCACCUGGCACUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAUGCCCUGUGGACUCAGUUCUGGUGCCCGGCAGUGCUAC
...............(..(..................................................).).................
...............(..(.......(.(...............................)).......).).................
...............(..(.......(.(..............(..).............)).......).).................
........(.(....(..(.......(.(..............(..).............)).......).)....).)..........
>CT025772.15/118748-118837
UUGAGCACUUUUCCCUGAGAACUGAAUUCCAUAGAUGGUGUUCAUGAAAAGUUCAUCUAUGGGCUCAGUUCUUCUGGCAAUCUGUUUAAU
..............(..(.....................................................).)................
..............(..(........(.(...............................).)........).)................
..............(..(........(.(..............(..).............).)........).)................
......(..(....(..(........(.(..............(..).............).)........).)....)...).......
>AAEX03015486.1/23854-23943
CUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUUGAGCAAACAGCCUAGGGACUCAGUUCUGGUGCCCGGCUGUGCUCU
...............(..(...................................................).).................
...............(..(.......(.(...............................).).......).).................
...............(..(.......(.(..............(..).............).).......).).................
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
...............(..(...................................................).).................
...............(..(.......(.(...............................).).......).).................
...............(..(.......(.(..............(..).............).).......).).................
........(.(....(..(.......(.(..............(..).............).).......).)....).)..........
>AAVX01275541.1/618-713
UGGCAGCUCCAGCUGUGAGAACUGAAUUCCAUGGGCUGGUCACGCAGUUUUCUUCCUCAGUCCAUAGUAGUCAGUUCUUCCGUUUGGCUGCUUGAU
..............(..(...........................................................).)................
..............(..(........(.(.....................................).)........).)................
..............(..(........(.(..............(........).............).)........).)................
>ABDC01238493.1/6154-6243
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGUGAAUGCCCUAGGGACUCAGUUCUGGUGCCUGGCUGUGCCAC
...............(..(...................................................).).................
...............(..(.......(.(...............................).).......).).................
...............(..(.......(.(..............(..).............).).......).).................
>AAWZ02005630.1/5439-5350
AUGGUUGCCUAGCUCUGAGAACUGAAUUCCAUAGGCUUUAGAAUAAUUGAAACGCCCCGUGGAUUCAGUUCUACAGCUAGGCAGCAACUA
...............(..(...................................................).).................
...............(..(.......(.(...............................).).......).).................
...............(..(.......(.(.............(...).............).).......).).................
>AABR05018978.1/7743-7657
GUGUAUCCUCAGCUCUGAGAACUGAAUUCCAUGGGUUAUAGCAAUGUCAGACCUGUGAAGUUCAGUUCUUUAGCUGGGAUAGCUCUA
..............(..(..................................................).)................
..............(..(........(.(............................).)........).)................
>AAFC03000506.1/621-535
GUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUAGGUUGUGUCAGUGUCAGACCUGUGAAGUUUAGUUCUUUAGCUGGGAUAUCUCUA
..............(..(..................................................).)................
..............(..(........(.(............................).)........).)................
>CAAA01220328.1/4488-4574
GUGUAUCCCCAGCUCUGAGAACUGAAUUCCAUGGGUUAUAUCAAUGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAGCUCUG
..............(..(..................................................).)................
..............(..(........(.(............................).)........).)................
>AC008388.7/35916-36002
GUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAGUGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUG
..............(..(..................................................).)................
..............(..(........(.(............................).)........).)................
>AADN03004045.1/26172-26268
UUGGCAGUUCCCAGCUCUGAGAACUGAAUUCCAUGGACUGGUUUCAAUUCCAUGCGUUCAGUCCAUGGUAUUCAGUUCUCUAGCUUGGCUGCAUCAA
.................(..(........................................................).).................
..........(..(..............(.(....................................).).............).)...........
>AADN03006667.1/347156-347063
GUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUAAUUGAAUCCUUUGUCAGACCCAUGGGGCUCAGUUCUUCAGCUUGGAUAUUUCUG
..............(..(.........................................................).)................
........(..(..............(.(...................................).).............).)...........
>AANH01005121.1/10850-10759
AUGAGUGUUGUACUAUGAGAACUGAAUUCCAUAGAUGGUGGCAUCUUCAGGUGUCAUCUAUGGGCUCAGUUCUUUUGGUACGGUACUAAUUU
.......................(..(.....................................).).........................
>AAGU03026742.1/175862-175773
CUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAACUCUAGCAGAUGCCCUAGGAACUCAGUUCUGGUGCCCGGCUGUGCUGC
...............(..(...................................................).).................
>CAAB02001937.1/426747-426656
UAGAGUGCUCCGCCAUGAGAACUGAAUUCCAUAGAUGGUGACAUUUGUAUGCUUCAUCUAUGGGCUCAGUUCUUUUGGCUCGGUACUGUCCA
.......................(..(.....................................).).........................
>BAAE01103753.1/1540-1630
AGAAGUGCUCUACUAUGAGAACUGAAUUCCAUAGAUGGUAGCUUUUCUAGGUGUCAUCUAUGGGCUCAGUUCUUUUGGCAUGGUACUGGUU
.......................(..(.....................................).)........................
>AAFR03012754.1/25474-25388
UUGUAUCUUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUCUUUGUAUCAGACCUAUGAAACUCAGUUCUUCAGCUGGAAUAUCUCUG
..............(..(..................................................).)................
>AAPN01141106.1/3079-3169
AUGCGGUGCUUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGUUGAUGAGGAUGCCCUAGGGAUUCAGUUCCACAGCCCAGCAACCCACA
........................(..(....................................).)........................
>AAGV020197496.1/364-278
GUGUAUCCCCAGCUUUGAGAACUGAAUUCCAUGGGUUUUCUCAAUGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUG
..............(..(..................................................).)................
>CAAE01015006.1/213889-213798
AGGAGUGCUCUGCUGUGAGAACUGAAUUCCAUAGAUGGUGACAUUUGUAUGUGUCAUCUAUGGGCUCAGUUCUUUUGGCUUGGUACUGUUUU
.......................(..(.....................................).).........................

ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio
1 (NR()U) < 0.001 9.56
AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
.........1.........2.........3.........4.........5.........6.........7.........8.........9
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
2 Y(U(N)) < 0.001 4.03
AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
.........1.........2.........3.........4.........5.........6.........7.........8.........9
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3 (.U.().Y.) < 0.001 2.41
AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
.........1.........2.........3.........4.........5.........6.........7.........8.........9
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4 (.Y.) < 0.001 1.32
AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
.........1.........2.........3.........4.........5.........6.........7.........8.........9
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ORB p-value ORB frequency
(per structure per nucleotide) 		Means
ratio

NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio
1 Y(U(N)) < 0.001 4.03
AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
.........1.........2.........3.........4.........5.........6.........7.........8.........9
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2 U(G(A)) < 0.001 31.9
AAGW02060858.1/19148-19237
UUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCCGUGAGCUCUAGCAAAUGCCCUGGGGACUCAGUUCUGGUGCCCGGCUGUGCUGC
.........1.........2.........3.........4.........5.........6.........7.........8.........9
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
NCM p-value NCM frequency
(per structure per nucleotide) 		Means
ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).