D-ORB

The Overrepresented RNA Blocks

M.J. Dupont, F. Major

D-ORB: A Web Server to Extract Structural Features of Related But Unaligned RNA Sequences

J. Mol. Biol., 435 (2023)

mir-1 microRNA precursor family (Rfam: RF00103)

Options

Negatives sequences: Random sequences of similar lengths
ORBs positions sequence: Best consensus structure-matching sequence
Motifs: 162,498 motifs on the alphabet ACGURYN

Rfam

D-ORB

Augmented

((U)AU)G
(.RU.().RY.)
(Y()N)
((G)A)A
(.NYNNR.)
(.UAY.())

98.5
100.0
100.0
100.0
100.0
89.2

((G)A)A
(.NYNNR.)

% of positive sequence with ORB

Job*

Email*

Sequence(s)*

Obtain

One structure matching the consensus structure ORBs
Several structures containing instances of most discriminative ORBs

Up to structures per sequence

Position offset nucleotides

Job*

Email*

Wildtype sequence*

Mutant sequences

All SNPs
Submit mutant sequences

Use the mutation generator

Deep neural network:

5-fold cross-validation: 98 %
(± 0.468 %)

Decision tree:

5-fold cross-validation: 95.6 %
(± 2.33 %)

D-ORB structure

D-ORB structure decision tree:

5-fold cross-validation: 94.7 %
(± 1.46 %)

of DQ066649.1/1-73

DQ066649.1/1-73

UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG
.(((((.((((((((((((..((.((.(...(((......).)))..)).))..)))))))))))).)))).)
.........1.........2.........3.........4.........5.........6.........7...
1234567890123456789012345678901234567890123456789012345678901234567890123

abstract shape: `()`

					Number of sequences
	Structure	ORBs			(out of 65)	(%)
1		((U)AU)G			62	95.4
>DQ066650.1/1-72 UCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUG .........................(.(................)..)........................ >AC103987.5/56357-56281 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU ...........................(.(................)..)........................... >AAHY01004442.1/497-572 CCCCAGGCCACAUGCUUCUUUAUAUCCUCAUAGAUAUCUCAGCACUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC ..........................(..(...............)..)........................... >AC140316.3/155249-155325 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUUCAGUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGGU ...........................(.(................)..)........................... >AAPN01163915.1/14813-14737 GCUUGAGGAACAUACUUCUUUAUAUCCCCAUAUGAACCUGGCAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU ...........................(.(................)..)........................... >AAHX01093471.1/12884-12808 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUGGGU ...........................(.(................)..)........................... >AANH01005371.1/151669-151592 CCUUGGUGCACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAGCUAUGGAAUGUAAAGAAGUAUGUAUUCCUGGU ...........................(..(................)..)........................... >AAGD02012398.1/27745-27823 UGCCGAGCUGCAUACUUCCUUACAUGCCCAUACUAUAUCAGUAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGUU ...........................(...(................)..)........................... >CR589876.7/166160-166084 GCUUGGUAGACAUACUUCUUUAUAUGCCCAUAUGAACAAGAGCAGCUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU ...........................(.(................)..)........................... >AALT01502699.1/11495-11572 ACUCAAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUAUGUACUUUUGGU ............................(.(................)..)........................... >AL449263.6/21373-21297 GCUUGGGAAACAUACUUCUUUAUAUGCCCAUAUGGACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC ...........................(.(................)..)........................... >AL391221.15/79486-79562 UCCCGAGGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC ............................((................)..)........................... >DQ066652.1/2-78 CUUUAGGGCACAUACUUCUUUAUAUGCCCAUACUGAAUGAAAAUGCUAUGGAAUGUUAAGAAGUAUGUAACCUAAGG ...........................(.(................)..)........................... >AAFR03005394.1/95017-95093 GCUUGAGAAACAUACUACUUUAUAUGCCCAUAUGAACGUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCCGGU ...........................(.(................)..)........................... >AANU01221577.1/6692-6768 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAGGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGUA ...........................(.(................)..)........................... >DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .........................(.(................)..)......................... >AAPN01089888.1/1993-2069 GCUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGC ...........................(.(................)..)........................... >AAPN01136163.1/2517-2440 CCCCGGGCCACACACUUCUUCAUAUGCCCAUAGGGAGCUGCCCGAACUAUGGAAUGUUAAGAAGUGUGUGUUCUUGGG ...........................(.(.................)..)........................... >AAVX01149879.1/956-880 ACCUGAAACACAUACUUCUUUAUAUGCCCAUAUGAACCUCACAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCUGGU ...........................(.(................)..)........................... >AC147912.2/160163-160239 GUUUGGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUAUC ...........................(.(................)..)........................... >DQ520618.1/109-184 CCCAAGGCCACAUGCUUCUUUAUAUCCCCAUACGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC ...........................((................)..)........................... >BAAB01105211.1/2094-2168 GCGCAAGUUCCGUGCUUCCUUACUUCCCAUAGUCAUUGUAAUCAUAUGGAAUGUAAAGAAGUAUGGAGCUGCGCG ..........................(.(...............)..)........................... >AANG01241232.1/1165-1238 GCUUGGGAAACAUACUUCUUUAUAUGCCCAUAUGGACCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC ...........................((..............)..)........................... >AAYZ01364871.1/459-535 GCUUGGGAGACAUACUUCUUUAUACGCCCAUAUGGACUUGCUGCACUAUGGAAUGUAAAGAAGUAUGUACCCCAGGC ...........................(.(................)..)........................... >AALT01102453.1/1268-1343 GCCAAGAUGACAUGCUUCUUUAUAUCCCCAUACGGAUCUCUUGGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC ...........................((................)..)........................... >BAAF04038301.1/61-138 CCCUGGGGUACAUACUUCUUUAUGUACCCAUAUGAAGAUAUGAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUCGGU ...........................(.(.................)..)........................... >AAFR03002451.1/41335-41260 UCUGAGGCAACAUGCUUCUUUAUAUCCCCAUAUGAAUUAUGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ...........................((................)..)........................... >AL929326.9/101067-101144 ACUUGGUGUACAUACUUCUUUAUGUGCCCAUAUGAACAUAUAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU ...........................(..(................)..)........................... >AAPN01261137.1/2838-2913 UCCGAGACAACAUGCUUCUUUAUAUCCCCAUAUGGAUUACGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ...........................((................)..)........................... >AAAB01008964.1/1830748-1830826 GCGAAAGUUCCAUGCUUCCUUGCAUUCAAUAGUAUGUUUGUAAAACCCUAUGGAAUGUAAAGAAGUAUGGAGCGAUUGG ...........................(..(.................)..)........................... >BAAF04064761.1/1030-1106 GCUUGGGGGACAUACUUCUUUAUAUGCCCAUAUGAACACGAGCAACUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU ...........................(.(................)..)........................... >AANN01270542.1/4439-4364 CCCAAAGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGUC ...........................((................)..)........................... >AAKO01002808.1/45325-45400 UUGAGAGUUCCAUGCUUCCUUGCAUUCAAUAGUUAUACUCAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUC ...........................(..(..............)..)........................... >AAFS01000978.1/39458-39534 UUGAGAGUUCCAUGCUUCCUUGCAUUCAAUAGUAUAACAUAAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUC ...........................((.................)..)........................... >AAJJ01000046.1/50771-50844 UCGCGAGUUCCGUGCUUCCUUACUUCCCAUAGUGCUUUAAACGUAUGGAAUGUAAAGAAGUAUGGAGCGAACGC ..........................(.(..............)..)........................... >AANI01016241.1/6126-6050 UUGAGAGUUCCAUGCUUCCUUACAUUCAAUAGUAUUCAAAUAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUC ...........................((.................)..)........................... >CAAE01015003.1/757237-757162 CUUGUAAGGACAUGCUUCCUUAUAUCCCCAUAUUAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUUACGAG ...........................((................)..)........................... >AAQB01006401.1/151186-151263 UUGAGAGUUCCAUGCUUCCUUGCAUUCAAUAGUAUAUUAAAUAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUC ...........................(.(.................)..)........................... >AAZX01000650.1/30055-30128 GCGUCUGUUCCGUGCUUCCUUACUUCCCAUAGUGCACGUGACGUAUGGAAUGUAAAGAAGUAUGGAGCCGCGCU ..........................((...............)..)........................... >BX276101.6/115878-115803 CUUGUGAAGACAUGCUUCCUUAUAUGCCCAUAUUAAUGCUCAAGUUAUGGAAUGUAAGGAAGUGUGUGGUUUCAGG ...........................((................)..)........................... >AAVX01164741.1/393-468 UCCAAAACUGCAUACUUCUUCAUAUGCCCAUAUGAAAUGCUUUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGG ...........................((................)..)........................... >AAGV020639359.1/176-251 CCCCGGGAGACAUACUUCUUUAUAUGCCCAUAUGGAGCUCGGAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC ...........................((................)..)........................... >AAZO01007144.1/49277-49350 UUACUAGGUCCGUGCUUCCUUACUUCCCAUAUAGUGUUUGUUUUAUGGAAUGUAAAGAAGUAUGGAGCCUGUAC ..........................((...............)..)........................... >AANH01006842.1/36647-36722 CUCGCGAGGACAUGCUUCCUUAUAUCCCCAUAUCAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUCUCAAG ...........................((................)..)........................... >AAWZ02017015.1/31896-31821 UUUGAGAUUACAUGCUUCUUUAUAUCUCCAUAUGAAUUGCCUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCAAG ............................((...............)..)........................... >CAAK05040482.1/7048-7123 AUUGAGACGACAUACUUCCUUAUAUCCCCAUAUUCAGAAUUAAUCUAUGGAAUGUAAGGAAGUGUGUGGCUUCAGU ...........................((................)..)........................... >AAWU01006939.1/25735-25811 GCGAAAGUUCCAUGCUUCCUUGCAUUCAAUAGUGAUCUUUGAAACGUAUGGAAUGUAAAGAAGUAUGGAGCGCUCGG ...........................(.(................)..)........................... >AADN03007856.1/168402-168478 GCUUGAGAGACAUACUUCUUUAUAUGCCCAUAUGAACCUGGCAAUCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU ...........................(.(................)..)........................... >AADN03008235.1/118591-118669 CCCAACCCUACAUACUUCUUCAUAUGCCCAUAUGGAGUCGGCCGGCGUUAUGGAAUGUUAAGAAGUAUGUAUCCUCGGG ...........................(...(................)..)........................... >AAPE02049319.1/6122-6197 GCCUGGGAGACAUACUUCUUUAUAUGCCCAUAUGACCUGGGAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU ...........................((................)..)........................... >ABEG02003477.1/15436-15515 UGCCGAGCUGCAUGCUUCUUCUACAUGCCCAUACUAUAUCGUAAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGAA ............................(...(................)..)........................... >AAPT01020974.1/21428-21504 UUGAGAGUUCCAUGCUUCCUUGCAUUCAAUAGUAUAUAAAUAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUC ...........................(.(................)..)........................... >AAWZ02024324.1/1768-1847 UCUUGAGCCUACAUACUUCUUCAUAUGCCCAUAUGGAGUCGGCCAGAUUUAUGGAAUGUUAAGAAGUAUGUAUCGUUGGG ............................(...(................)..)........................... >AAGE02025061.1/66260-66336 UCGAAAGUUCCAUGCUUCCUUGCAUUCAAUAGUGAUUCUGAAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGCUCGG ...........................(.(................)..)........................... >AAWZ02009612.1/57865-57941 GUUGAGAGCACAUACUUCUUUAUGUACCCAUAUGAAGAUACAAUGUUAUGGAAUGUAAAGAAGUAUGUAUUUUUGAU ...........................(.(................)..)........................... >AL672157.5/42188-42264 GCUUGGGACACAUACUUCUUUAUAUGCCCAUAUGAACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC ...........................(.(................)..)........................... >AEKZ01016876.1/452-379 GAUGCUGUUCCGUGCUUCCUUACUUCCCAUAGUGGAUGCGACGUAUGGAAUGUAAAGAAGUAUGGAGCUGCGCC ..........................((...............)..)........................... >AAVX01053845.1/1717-1792 GCCUGGAACACAUACUUCUUUAUAUACCCAUAUGAACUUAACAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU ...........................((................)..)........................... >FO081495.1/23097-23019 UACCGAGCUGCAUACUUCCUUACAUGCCCAUACUAUAUCAUAAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGGG ...........................(...(................)..)........................... >CAAE01014981.1/12786-12709 CCUUAGUGUACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAACUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU ...........................(..(................)..)........................... >AADN03003607.1/193091-193166 UAUGAGAUGACAUGCUUCUUUAUAUCCCCAUAUGGAUUAGGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCAGG ...........................((................)..)........................... >AC087074.1/69936-70014 UGCCGAGCUGCAUACUUCCUUACAUGCCCAUACUGUACUGUGAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGAA ...........................(...(................)..)...........................
2		((U)AU)G (.RU.().RY.)			53	81.5
>BAAF04064761.1/1030-1106 GCUUGGGGGACAUACUUCUUUAUAUGCCCAUAUGAACACGAGCAACUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU ....................(..(...(.(................)..)...)..).................... >AAVX01164741.1/393-468 UCCAAAACUGCAUACUUCUUCAUAUGCCCAUAUGAAAUGCUUUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGG ....................(..(...((................)..)...)..).................... >CAAK05040482.1/7048-7123 AUUGAGACGACAUACUUCCUUAUAUCCCCAUAUUCAGAAUUAAUCUAUGGAAUGUAAGGAAGUGUGUGGCUUCAGU ....................(..(...((................)..)...)..).................... >AAHY01004442.1/497-572 CCCCAGGCCACAUGCUUCUUUAUAUCCUCAUAGAUAUCUCAGCACUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC ....................(..(..(..(...............)..)...)..).................... >AALT01102453.1/1268-1343 GCCAAGAUGACAUGCUUCUUUAUAUCCCCAUACGGAUCUCUUGGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC ....................(..(...((................)..)...)..).................... >AAHX01093471.1/12884-12808 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUGGGU ....................(..(...(.(................)..)...)..).................... >CR589876.7/166160-166084 GCUUGGUAGACAUACUUCUUUAUAUGCCCAUAUGAACAAGAGCAGCUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU ....................(..(...(.(................)..)...)..).................... >AC103987.5/56357-56281 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU ....................(..(...(.(................)..)...)..).................... >AANH01006842.1/36647-36722 CUCGCGAGGACAUGCUUCCUUAUAUCCCCAUAUCAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUCUCAAG ....................(..(...((................)..)...)..).................... >AALT01502699.1/11495-11572 ACUCAAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUAUGUACUUUUGGU .....................(..(...(.(................)..)...)..).................... >AANG01241232.1/1165-1238 GCUUGGGAAACAUACUUCUUUAUAUGCCCAUAUGGACCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC ....................(..(...((..............)..)...)..).................... >DQ520618.1/109-184 CCCAAGGCCACAUGCUUCUUUAUAUCCCCAUACGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC ....................(..(...((................)..)...)..).................... >AL929326.9/101067-101144 ACUUGGUGUACAUACUUCUUUAUGUGCCCAUAUGAACAUAUAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU ....................(..(...(..(................)..)...)..).................... >AAPN01136163.1/2517-2440 CCCCGGGCCACACACUUCUUCAUAUGCCCAUAGGGAGCUGCCCGAACUAUGGAAUGUUAAGAAGUGUGUGUUCUUGGG ....................(..(...(.(.................)..)...)..).................... >AAVX01149879.1/956-880 ACCUGAAACACAUACUUCUUUAUAUGCCCAUAUGAACCUCACAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCUGGU ....................(..(...(.(................)..)...)..).................... >AC140316.3/155249-155325 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUUCAGUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGGU ....................(..(...(.(................)..)...)..).................... >AAZO01007144.1/49277-49350 UUACUAGGUCCGUGCUUCCUUACUUCCCAUAUAGUGUUUGUUUUAUGGAAUGUAAAGAAGUAUGGAGCCUGUAC ..........(...(...........((...............)..)............)...).......... >AAPN01089888.1/1993-2069 GCUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGC ....................(..(...(.(................)..)...)..).................... >AAWZ02009612.1/57865-57941 GUUGAGAGCACAUACUUCUUUAUGUACCCAUAUGAAGAUACAAUGUUAUGGAAUGUAAAGAAGUAUGUAUUUUUGAU ....................(..(...(.(................)..)...)..).................... >AAPE02049319.1/6122-6197 GCCUGGGAGACAUACUUCUUUAUAUGCCCAUAUGACCUGGGAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU ....................(..(...((................)..)...)..).................... >CAAE01015003.1/757237-757162 CUUGUAAGGACAUGCUUCCUUAUAUCCCCAUAUUAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUUACGAG ....................(..(...((................)..)...)..).................... >DQ066650.1/1-72 UCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUG ..................(..(...(.(................)..)...)..)................. >AL449263.6/21373-21297 GCUUGGGAAACAUACUUCUUUAUAUGCCCAUAUGGACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC ....................(..(...(.(................)..)...)..).................... >AC147912.2/160163-160239 GUUUGGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUAUC ....................(..(...(.(................)..)...)..).................... >AADN03007856.1/168402-168478 GCUUGAGAGACAUACUUCUUUAUAUGCCCAUAUGAACCUGGCAAUCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU ....................(..(...(.(................)..)...)..).................... >DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG ..................(..(...(.(................)..)...)..).................. >AAFR03005394.1/95017-95093 GCUUGAGAAACAUACUACUUUAUAUGCCCAUAUGAACGUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCCGGU ....................(..(...(.(................)..)...)..).................... >AANN01270542.1/4439-4364 CCCAAAGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGUC ....................(..(...(.(...............)..)...)..).................... >AL672157.5/42188-42264 GCUUGGGACACAUACUUCUUUAUAUGCCCAUAUGAACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC ....................(..(...(.(................)..)...)..).................... >AANU01221577.1/6692-6768 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAGGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGUA ....................(..(...(.(................)..)...)..).................... >AAPN01261137.1/2838-2913 UCCGAGACAACAUGCUUCUUUAUAUCCCCAUAUGGAUUACGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ....................(..(...(.(...............)..)...)..).................... >BAAF04038301.1/61-138 CCCUGGGGUACAUACUUCUUUAUGUACCCAUAUGAAGAUAUGAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUCGGU ....................(..(...(.(.................)..)...)..).................... >AAPN01163915.1/14813-14737 GCUUGAGGAACAUACUUCUUUAUAUCCCCAUAUGAACCUGGCAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU ....................(..(...(.(................)..)...)..).................... >AANH01005371.1/151669-151592 CCUUGGUGCACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAGCUAUGGAAUGUAAAGAAGUAUGUAUUCCUGGU ....................(..(...(.(.................)..)...)..).................... >DQ066652.1/2-78 CUUUAGGGCACAUACUUCUUUAUAUGCCCAUACUGAAUGAAAAUGCUAUGGAAUGUUAAGAAGUAUGUAACCUAAGG ....................(..(...(.(................)..)...)..).................... >AADN03008235.1/118591-118669 CCCAACCCUACAUACUUCUUCAUAUGCCCAUAUGGAGUCGGCCGGCGUUAUGGAAUGUUAAGAAGUAUGUAUCCUCGGG ....................(..(...(.(..................)..)...)..).................... >AAGD02012398.1/27745-27823 UGCCGAGCUGCAUACUUCCUUACAUGCCCAUACUAUAUCAGUAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGUU ......................(..(.(.(..................)..).)..)...................... >AEKZ01016876.1/452-379 GAUGCUGUUCCGUGCUUCCUUACUUCCCAUAGUGGAUGCGACGUAUGGAAUGUAAAGAAGUAUGGAGCUGCGCC ..........(...(...........((...............)..)............)...).......... >AADN03003607.1/193091-193166 UAUGAGAUGACAUGCUUCUUUAUAUCCCCAUAUGGAUUAGGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCAGG ....................(..(...(...(.............)..)...)..).................... >AAAB01008964.1/1830748-1830826 GCGAAAGUUCCAUGCUUCCUUGCAUUCAAUAGUAUGUUUGUAAAACCCUAUGGAAUGUAAAGAAGUAUGGAGCGAUUGG ......................(..(.(..(.................)..).)..)...................... >AAWZ02017015.1/31896-31821 UUUGAGAUUACAUGCUUCUUUAUAUCUCCAUAUGAAUUGCCUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCAAG ....................(...(...((...............)..)...)..).................... >CAAE01014981.1/12786-12709 CCUUAGUGUACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAACUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU ....................(..(...(.(.................)..)...)..).................... >AL391221.15/79486-79562 UCCCGAGGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC .....................(..(...(.(...............)..)...)..).................... >AAVX01053845.1/1717-1792 GCCUGGAACACAUACUUCUUUAUAUACCCAUAUGAACUUAACAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU ....................(..(...(.(...............)..)...)..).................... >AAWZ02024324.1/1768-1847 UCUUGAGCCUACAUACUUCUUCAUAUGCCCAUAUGGAGUCGGCCAGAUUUAUGGAAUGUUAAGAAGUAUGUAUCGUUGGG .....................(..(...(.(..................)..)...)..).................... >ABEG02003477.1/15436-15515 UGCCGAGCUGCAUGCUUCUUCUACAUGCCCAUACUAUAUCGUAAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGAA .......................(...((.(..................)..).)..)...................... >AAGE02025061.1/66260-66336 UCGAAAGUUCCAUGCUUCCUUGCAUUCAAUAGUGAUUCUGAAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGCUCGG ......................(..(.(...(..............)..).)..)...................... >FO081495.1/23097-23019 UACCGAGCUGCAUACUUCCUUACAUGCCCAUACUAUAUCAUAAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGGG ......................(...((.(..................)..).)..)...................... >AC087074.1/69936-70014 UGCCGAGCUGCAUACUUCCUUACAUGCCCAUACUGUACUGUGAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGAA ......................(..(.(.(..................)..).)..)...................... >AAYZ01364871.1/459-535 GCUUGGGAGACAUACUUCUUUAUACGCCCAUAUGGACUUGCUGCACUAUGGAAUGUAAAGAAGUAUGUACCCCAGGC ....................(..(...(.(................)..)...)..).................... >AAFR03002451.1/41335-41260 UCUGAGGCAACAUGCUUCUUUAUAUCCCCAUAUGAAUUAUGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ....................(..(...((................)..)...)..).................... >AAGV020639359.1/176-251 CCCCGGGAGACAUACUUCUUUAUAUGCCCAUAUGGAGCUCGGAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC ....................(..(...((................)..)...)..).................... >BX276101.6/115878-115803 CUUGUGAAGACAUGCUUCCUUAUAUGCCCAUAUUAAUGCUCAAGUUAUGGAAUGUAAGGAAGUGUGUGGUUUCAGG ....................(..(...((................)..)...)..)....................
3		((U)AU)G (.RU.().RY.) (Y()N)			41	63.1
>AANH01005371.1/151669-151592 CCUUGGUGCACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAGCUAUGGAAUGUAAAGAAGUAUGUAUUCCUGGU .......(.(..........(..(...(.(.................)..)...)..)..........).)....... >DQ066652.1/2-78 CUUUAGGGCACAUACUUCUUUAUAUGCCCAUACUGAAUGAAAAUGCUAUGGAAUGUUAAGAAGUAUGUAACCUAAGG .......(.(..........(..(...(.(................)..)...)..)..........).)....... >AAHX01093471.1/12884-12808 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUGGGU .......(.(..........(..(...(.(................)..)...)..)..........).)....... >DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .....(.(..........(..(...(.(................)..)...)..)..........).)..... >AAPN01089888.1/1993-2069 GCUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGC .......(.(..........(..(...(.(................)..)...)..)..........).)....... >AAVX01149879.1/956-880 ACCUGAAACACAUACUUCUUUAUAUGCCCAUAUGAACCUCACAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCUGGU .......(.(..........(..(...(.(................)..)...)..)..........).)....... >DQ066650.1/1-72 UCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUG .....(.(..........(..(...(.(................)..)...)..)..........).).... >AAWZ02009612.1/57865-57941 GUUGAGAGCACAUACUUCUUUAUGUACCCAUAUGAAGAUACAAUGUUAUGGAAUGUAAAGAAGUAUGUAUUUUUGAU .......(.(..........(..(...(.(................)..)...)..)..........).)....... >AC147912.2/160163-160239 GUUUGGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUAUC .......(.(..........(..(...(.(................)..)...)..)..........).)....... >AC140316.3/155249-155325 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUUCAGUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGGU .......(.(..........(..(...(.(................)..)...)..)..........).)....... >AAHY01004442.1/497-572 CCCCAGGCCACAUGCUUCUUUAUAUCCUCAUAGAUAUCUCAGCACUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC .......(.(..........(..(..(..(...............)..)...)..)..........).)....... >CAAK05040482.1/7048-7123 AUUGAGACGACAUACUUCCUUAUAUCCCCAUAUUCAGAAUUAAUCUAUGGAAUGUAAGGAAGUGUGUGGCUUCAGU ......(.(...........(..(...((................)..)...)..)...........).)...... >AAGV020639359.1/176-251 CCCCGGGAGACAUACUUCUUUAUAUGCCCAUAUGGAGCUCGGAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC .........(.(........(..(...((................)..)...)..)........).)......... >BX276101.6/115878-115803 CUUGUGAAGACAUGCUUCCUUAUAUGCCCAUAUUAAUGCUCAAGUUAUGGAAUGUAAGGAAGUGUGUGGUUUCAGG .........(.(........(..(...((................)..)...)..)........).)......... >CAAE01015003.1/757237-757162 CUUGUAAGGACAUGCUUCCUUAUAUCCCCAUAUUAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUUACGAG .........(.(........(..(...(.(...............)..)...)..)........).)......... >AANN01270542.1/4439-4364 CCCAAAGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGUC .......(.(..........(..(...(.(...............)..)...)..)..........).)....... >AC103987.5/56357-56281 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU .......(.(..........(..(...(.(................)..)...)..)..........).)....... >BAAF04064761.1/1030-1106 GCUUGGGGGACAUACUUCUUUAUAUGCCCAUAUGAACACGAGCAACUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU .........(.(........(..(...(.(................)..)...)..)........).)......... >AAFR03005394.1/95017-95093 GCUUGAGAAACAUACUACUUUAUAUGCCCAUAUGAACGUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCCGGU .........(.(........(..(...(.(................)..)...)..)........).)......... >AL391221.15/79486-79562 UCCCGAGGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC ........(.(..........(..(...(.(...............)..)...)..)..........).)....... >AALT01102453.1/1268-1343 GCCAAGAUGACAUGCUUCUUUAUAUCCCCAUACGGAUCUCUUGGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC ......(.(...........(..(...(.(...............)..)...)..)...........).)...... >AAYZ01364871.1/459-535 GCUUGGGAGACAUACUUCUUUAUACGCCCAUAUGGACUUGCUGCACUAUGGAAUGUAAAGAAGUAUGUACCCCAGGC .........(.(........(..(...(...(..............)..)...)..)........).)......... >AL929326.9/101067-101144 ACUUGGUGUACAUACUUCUUUAUGUGCCCAUAUGAACAUAUAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU .......(.(..........(..(...(..(................)..)...)..)..........).)....... >CR589876.7/166160-166084 GCUUGGUAGACAUACUUCUUUAUAUGCCCAUAUGAACAAGAGCAGCUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU .........(.(........(..(...(.(................)..)...)..)........).)......... >AADN03008235.1/118591-118669 CCCAACCCUACAUACUUCUUCAUAUGCCCAUAUGGAGUCGGCCGGCGUUAUGGAAUGUUAAGAAGUAUGUAUCCUCGGG .......(.(..........(..(...(.(..................)..)...)..)..........).)....... >AALT01502699.1/11495-11572 ACUCAAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUAUGUACUUUUGGU ........(.(..........(..(...(.(................)..)...)..)..........).)....... >DQ520618.1/109-184 CCCAAGGCCACAUGCUUCUUUAUAUCCCCAUACGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC .......(.(..........(..(...(.(...............)..)...)..)..........).)....... >AL449263.6/21373-21297 GCUUGGGAAACAUACUUCUUUAUAUGCCCAUAUGGACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC .........(.(........(..(...(.(................)..)...)..)........).)......... >AAPE02049319.1/6122-6197 GCCUGGGAGACAUACUUCUUUAUAUGCCCAUAUGACCUGGGAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..(...(.(...............)..)...)..)........).)......... >CAAE01014981.1/12786-12709 CCUUAGUGUACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAACUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU .......(.(..........(..(...(.(.................)..)...)..)..........).)....... >AAPN01163915.1/14813-14737 GCUUGAGGAACAUACUUCUUUAUAUCCCCAUAUGAACCUGGCAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..(...(.(................)..)...)..)........).)......... >AL672157.5/42188-42264 GCUUGGGACACAUACUUCUUUAUAUGCCCAUAUGAACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC .......(.(..........(..(...(.(................)..)...)..)..........).)....... >AADN03007856.1/168402-168478 GCUUGAGAGACAUACUUCUUUAUAUGCCCAUAUGAACCUGGCAAUCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..(...(.(................)..)...)..)........).)......... >AAVX01053845.1/1717-1792 GCCUGGAACACAUACUUCUUUAUAUACCCAUAUGAACUUAACAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU .......(.(..........(..(...(.(...............)..)...)..)..........).)....... >AANU01221577.1/6692-6768 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAGGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGUA .......(.(..........(..(...(.(................)..)...)..)..........).)....... >AAPN01261137.1/2838-2913 UCCGAGACAACAUGCUUCUUUAUAUCCCCAUAUGGAUUACGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ......(.(...........(..(...(.(...............)..)...)..)...........).)...... >BAAF04038301.1/61-138 CCCUGGGGUACAUACUUCUUUAUGUACCCAUAUGAAGAUAUGAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUCGGU .......(.(..........(..(...(.(.................)..)...)..)..........).)....... >AAVX01164741.1/393-468 UCCAAAACUGCAUACUUCUUCAUAUGCCCAUAUGAAAUGCUUUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGG .......(.(..........(..(...((................)..)...)..)..........).)....... >AAPN01136163.1/2517-2440 CCCCGGGCCACACACUUCUUCAUAUGCCCAUAGGGAGCUGCCCGAACUAUGGAAUGUUAAGAAGUGUGUGUUCUUGGG .......(.(..........(..(...(.(.................)..)...)..)..........).)....... >AAFR03002451.1/41335-41260 UCUGAGGCAACAUGCUUCUUUAUAUCCCCAUAUGAAUUAUGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ......(.(...........(..(...(.(...............)..)...)..)...........).)...... >AANH01006842.1/36647-36722 CUCGCGAGGACAUGCUUCCUUAUAUCCCCAUAUCAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUCUCAAG .........(.(........(..(...((................)..)...)..)........).).........
4		((U)AU)G (.RU.().RY.) (Y()N) ((G)A)A			39	60.0
>AAWZ02009612.1/57865-57941 GUUGAGAGCACAUACUUCUUUAUGUACCCAUAUGAAGAUACAAUGUUAUGGAAUGUAAAGAAGUAUGUAUUUUUGAU .......(.(..........(..((.((.(................)..)).))..)..........).)....... >AALT01102453.1/1268-1343 GCCAAGAUGACAUGCUUCUUUAUAUCCCCAUACGGAUCUCUUGGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC ......(.(...........(..((.((.(...............)..)).))..)...........).)...... >CAAK05040482.1/7048-7123 AUUGAGACGACAUACUUCCUUAUAUCCCCAUAUUCAGAAUUAAUCUAUGGAAUGUAAGGAAGUGUGUGGCUUCAGU ......(.(...........(..((.(((................)..)).))..)...........).)...... >CR589876.7/166160-166084 GCUUGGUAGACAUACUUCUUUAUAUGCCCAUAUGAACAAGAGCAGCUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU .........(.(........(..((.((.(................)..)).))..)........).)......... >DQ066652.1/2-78 CUUUAGGGCACAUACUUCUUUAUAUGCCCAUACUGAAUGAAAAUGCUAUGGAAUGUUAAGAAGUAUGUAACCUAAGG .......(.(..........(..((.((.(................)..)).))..)..........).)....... >AAPE02049319.1/6122-6197 GCCUGGGAGACAUACUUCUUUAUAUGCCCAUAUGACCUGGGAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..((.((.(...............)..)).))..)........).)......... >AAFR03005394.1/95017-95093 GCUUGAGAAACAUACUACUUUAUAUGCCCAUAUGAACGUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCCGGU .........(.(........(..((.((.(................)..)).))..)........).)......... >AAVX01149879.1/956-880 ACCUGAAACACAUACUUCUUUAUAUGCCCAUAUGAACCUCACAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCUGGU .......(.(..........(..((.((.(................)..)).))..)..........).)....... >CAAE01014981.1/12786-12709 CCUUAGUGUACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAACUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU .......(.(..........(..((.((.(.................)..)).))..)..........).)....... >AAPN01089888.1/1993-2069 GCUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGC .......(.(..........(..((.((.(................)..)).))..)..........).)....... >AAHX01093471.1/12884-12808 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUGGGU .......(.(..........(..((.((.(................)..)).))..)..........).)....... >AAPN01163915.1/14813-14737 GCUUGAGGAACAUACUUCUUUAUAUCCCCAUAUGAACCUGGCAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..((.((.(................)..)).))..)........).)......... >AL672157.5/42188-42264 GCUUGGGACACAUACUUCUUUAUAUGCCCAUAUGAACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC .......(.(..........(..((.((.(................)..)).))..)..........).)....... >AANU01221577.1/6692-6768 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAGGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGUA .......(.(..........(..((.((.(................)..)).))..)..........).)....... >AADN03007856.1/168402-168478 GCUUGAGAGACAUACUUCUUUAUAUGCCCAUAUGAACCUGGCAAUCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..((.((.(................)..)).))..)........).)......... >AAPN01261137.1/2838-2913 UCCGAGACAACAUGCUUCUUUAUAUCCCCAUAUGGAUUACGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ......(.(...........(..((.((.(...............)..)).))..)...........).)...... >DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .....(.(..........(..((.((.(................)..)).))..)..........).)..... >AAVX01164741.1/393-468 UCCAAAACUGCAUACUUCUUCAUAUGCCCAUAUGAAAUGCUUUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGG .......(.(..........(..((.(((................)..)).))..)..........).)....... >AL391221.15/79486-79562 UCCCGAGGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC ........(.(..........(..((.((.(...............)..)).))..)..........).)....... >AAVX01053845.1/1717-1792 GCCUGGAACACAUACUUCUUUAUAUACCCAUAUGAACUUAACAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU .......(.(..........(..((.((.(...............)..)).))..)..........).)....... >AAFR03002451.1/41335-41260 UCUGAGGCAACAUGCUUCUUUAUAUCCCCAUAUGAAUUAUGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ......(.(...........(..((.((.(...............)..)).))..)...........).)...... >AAPN01136163.1/2517-2440 CCCCGGGCCACACACUUCUUCAUAUGCCCAUAGGGAGCUGCCCGAACUAUGGAAUGUUAAGAAGUGUGUGUUCUUGGG .......(.(..........(..((.((.(.................)..)).))..)..........).)....... >AAHY01004442.1/497-572 CCCCAGGCCACAUGCUUCUUUAUAUCCUCAUAGAUAUCUCAGCACUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC .......(.(..........(..((((..(...............)..)).))..)..........).)....... >BAAF04038301.1/61-138 CCCUGGGGUACAUACUUCUUUAUGUACCCAUAUGAAGAUAUGAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUCGGU .......(.(..........(..((.((.(.................)..)).))..)..........).)....... >AANH01006842.1/36647-36722 CUCGCGAGGACAUGCUUCCUUAUAUCCCCAUAUCAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUCUCAAG .........(.(........(..((.(((................)..)).))..)........).)......... >DQ520618.1/109-184 CCCAAGGCCACAUGCUUCUUUAUAUCCCCAUACGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC .......(.(..........(..((.((.(...............)..)).))..)..........).)....... >CAAE01015003.1/757237-757162 CUUGUAAGGACAUGCUUCCUUAUAUCCCCAUAUUAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUUACGAG .........(.(........(..((.((.(...............)..)).))..)........).)......... >AANH01005371.1/151669-151592 CCUUGGUGCACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAGCUAUGGAAUGUAAAGAAGUAUGUAUUCCUGGU .......(.(..........(..((.((.(.................)..)).))..)..........).)....... >AC103987.5/56357-56281 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU .......(.(..........(..((.((.(................)..)).))..)..........).)....... >BAAF04064761.1/1030-1106 GCUUGGGGGACAUACUUCUUUAUAUGCCCAUAUGAACACGAGCAACUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU .........(.(........(..((.((.(................)..)).))..)........).)......... >AANN01270542.1/4439-4364 CCCAAAGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGUC .......(.(..........(..((.((.(...............)..)).))..)..........).)....... >AC140316.3/155249-155325 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUUCAGUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGGU .......(.(..........(..((.((.(................)..)).))..)..........).)....... >AL929326.9/101067-101144 ACUUGGUGUACAUACUUCUUUAUGUGCCCAUAUGAACAUAUAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU .......(.(..........(..((.((..(................)..)).))..)..........).)....... >AALT01502699.1/11495-11572 ACUCAAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUAUGUACUUUUGGU ........(.(..........(..((.((.(................)..)).))..)..........).)....... >BX276101.6/115878-115803 CUUGUGAAGACAUGCUUCCUUAUAUGCCCAUAUUAAUGCUCAAGUUAUGGAAUGUAAGGAAGUGUGUGGUUUCAGG .........(.(........(..((.(((................)..)).))..)........).)......... >AC147912.2/160163-160239 GUUUGGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUAUC .......(.(..........(..((.((.(................)..)).))..)..........).)....... >AAGV020639359.1/176-251 CCCCGGGAGACAUACUUCUUUAUAUGCCCAUAUGGAGCUCGGAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC .........(.(........(..((.(((................)..)).))..)........).)......... >DQ066650.1/1-72 UCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUG .....(.(..........(..((.((.(................)..)).))..)..........).).... >AL449263.6/21373-21297 GCUUGGGAAACAUACUUCUUUAUAUGCCCAUAUGGACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC .........(.(........(..((.((.(................)..)).))..)........).).........
5		((U)AU)G (.RU.().RY.) (Y()N) ((G)A)A (.NYNNR.)			35	53.8
>CAAE01015003.1/757237-757162 CUUGUAAGGACAUGCUUCCUUAUAUCCCCAUAUUAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUUACGAG .........(.(........(..((.((.(....(......)...)..)).))..)........).)......... >AAPN01136163.1/2517-2440 CCCCGGGCCACACACUUCUUCAUAUGCCCAUAGGGAGCUGCCCGAACUAUGGAAUGUUAAGAAGUGUGUGUUCUUGGG .......(.(..........(..((.((.(.....(........)..)..)).))..)..........).)....... >AANU01221577.1/6692-6768 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAGGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGUA .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... >AAWZ02009612.1/57865-57941 GUUGAGAGCACAUACUUCUUUAUGUACCCAUAUGAAGAUACAAUGUUAUGGAAUGUAAAGAAGUAUGUAUUUUUGAU .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... >AAPN01163915.1/14813-14737 GCUUGAGGAACAUACUUCUUUAUAUCCCCAUAUGAACCUGGCAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..((.((.(.....(......)...)..)).))..)........).)......... >CR589876.7/166160-166084 GCUUGGUAGACAUACUUCUUUAUAUGCCCAUAUGAACAAGAGCAGCUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU .........(.(........(..((.((.(....(.......)...)..)).))..)........).)......... >AALT01102453.1/1268-1343 GCCAAGAUGACAUGCUUCUUUAUAUCCCCAUACGGAUCUCUUGGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC ......(.(...........(..((.((.(.....(.......).)..)).))..)...........).)...... >DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .....(.(..........(..((.((.(.....(......)...)..)).))..)..........).)..... >AC140316.3/155249-155325 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUUCAGUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGGU .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... >AAFR03002451.1/41335-41260 UCUGAGGCAACAUGCUUCUUUAUAUCCCCAUAUGAAUUAUGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ......(.(...........(..((.((.(.....(.....)...)..)).))..)...........).)...... >AANH01005371.1/151669-151592 CCUUGGUGCACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAGCUAUGGAAUGUAAAGAAGUAUGUAUUCCUGGU .......(.(..........(..((.((.(.....(.......)...)..)).))..)..........).)....... >CAAK05040482.1/7048-7123 AUUGAGACGACAUACUUCCUUAUAUCCCCAUAUUCAGAAUUAAUCUAUGGAAUGUAAGGAAGUGUGUGGCUUCAGU ......(.(...........(..((.(((......(.......).)..)).))..)...........).)...... >AALT01502699.1/11495-11572 ACUCAAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUAUGUACUUUUGGU ........(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... >AL929326.9/101067-101144 ACUUGGUGUACAUACUUCUUUAUGUGCCCAUAUGAACAUAUAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU .......(.(..........(..((.((..(.....(......)...)..)).))..)..........).)....... >AAPE02049319.1/6122-6197 GCCUGGGAGACAUACUUCUUUAUAUGCCCAUAUGACCUGGGAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..((.((.(.....(.....)...)..)).))..)........).)......... >AC147912.2/160163-160239 GUUUGGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUAUC .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... >BX276101.6/115878-115803 CUUGUGAAGACAUGCUUCCUUAUAUGCCCAUAUUAAUGCUCAAGUUAUGGAAUGUAAGGAAGUGUGUGGUUUCAGG .........(.(........(..((.(((.....(.......)..)..)).))..)........).)......... >AANH01006842.1/36647-36722 CUCGCGAGGACAUGCUUCCUUAUAUCCCCAUAUCAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUCUCAAG .........(.(........(..((.(((.....(......)...)..)).))..)........).)......... >DQ066650.1/1-72 UCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUG .....(.(..........(..((.((.(.....(......)...)..)).))..)..........).).... >AAHY01004442.1/497-572 CCCCAGGCCACAUGCUUCUUUAUAUCCUCAUAGAUAUCUCAGCACUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC .......(.(..........(..((((..(.....(.....)...)..)).))..)..........).)....... >AAPN01089888.1/1993-2069 GCUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGC .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... >AADN03007856.1/168402-168478 GCUUGAGAGACAUACUUCUUUAUAUGCCCAUAUGAACCUGGCAAUCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..((.((.(.....(......)...)..)).))..)........).)......... >AAFR03005394.1/95017-95093 GCUUGAGAAACAUACUACUUUAUAUGCCCAUAUGAACGUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCCGGU .........(.(........(..((.((.(....(.......)...)..)).))..)........).)......... >AC103987.5/56357-56281 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... >AL449263.6/21373-21297 GCUUGGGAAACAUACUUCUUUAUAUGCCCAUAUGGACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC .........(.(........(..((.((.(....(.......)...)..)).))..)........).)......... >AAVX01053845.1/1717-1792 GCCUGGAACACAUACUUCUUUAUAUACCCAUAUGAACUUAACAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU .......(.(..........(..((.((.(.....(.....)...)..)).))..)..........).)....... >AAPN01261137.1/2838-2913 UCCGAGACAACAUGCUUCUUUAUAUCCCCAUAUGGAUUACGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ......(.(...........(..((.((.(.....(.....)...)..)).))..)...........).)...... >AAHX01093471.1/12884-12808 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUGGGU .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... >AL672157.5/42188-42264 GCUUGGGACACAUACUUCUUUAUAUGCCCAUAUGAACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC .......(.(..........(..((.((.(....(.......)...)..)).))..)..........).)....... >AAGV020639359.1/176-251 CCCCGGGAGACAUACUUCUUUAUAUGCCCAUAUGGAGCUCGGAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC .........(.(........(..((.(((.....(......)...)..)).))..)........).)......... >AAVX01149879.1/956-880 ACCUGAAACACAUACUUCUUUAUAUGCCCAUAUGAACCUCACAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCUGGU .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... >DQ066652.1/2-78 CUUUAGGGCACAUACUUCUUUAUAUGCCCAUACUGAAUGAAAAUGCUAUGGAAUGUUAAGAAGUAUGUAACCUAAGG .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... >CAAE01014981.1/12786-12709 CCUUAGUGUACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAACUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU .......(.(..........(..((.((.(.....(.......)...)..)).))..)..........).)....... >BAAF04038301.1/61-138 CCCUGGGGUACAUACUUCUUUAUGUACCCAUAUGAAGAUAUGAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUCGGU .......(.(..........(..((.((.(.....(.......)...)..)).))..)..........).)....... >BAAF04064761.1/1030-1106 GCUUGGGGGACAUACUUCUUUAUAUGCCCAUAUGAACACGAGCAACUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU .........(.(........(..((.((.(.....(......)...)..)).))..)........).).........
6		((U)AU)G (.RU.().RY.) (Y()N) ((G)A)A (.NYNNR.) (.UAY.())			24	36.9
>DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .....(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)..... >AALT01502699.1/11495-11572 ACUCAAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUAUGUACUUUUGGU ........(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AAFR03005394.1/95017-95093 GCUUGAGAAACAUACUACUUUAUAUGCCCAUAUGAACGUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCCGGU .........(.(........(..((.((.(...((.......)..))..)).))..)........).)......... >AC147912.2/160163-160239 GUUUGGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUAUC .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >BAAF04064761.1/1030-1106 GCUUGGGGGACAUACUUCUUUAUAUGCCCAUAUGAACACGAGCAACUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU .........(.(........(..((.((.(...(.(......)..))..)).))..)........).)......... >DQ066652.1/2-78 CUUUAGGGCACAUACUUCUUUAUAUGCCCAUACUGAAUGAAAAUGCUAUGGAAUGUUAAGAAGUAUGUAACCUAAGG .......(.(..........(..((.((.(....((......)..))..)).))..)..........).)....... >AAVX01149879.1/956-880 ACCUGAAACACAUACUUCUUUAUAUGCCCAUAUGAACCUCACAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCUGGU .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AAPN01089888.1/1993-2069 GCUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGC .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AL672157.5/42188-42264 GCUUGGGACACAUACUUCUUUAUAUGCCCAUAUGAACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC .......(.(..........(..((.((.(...((.......)..))..)).))..)..........).)....... >DQ066650.1/1-72 UCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUG .....(.(..........(..((.((.(...(.(......)..))..)).))..)..........).).... >AC140316.3/155249-155325 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUUCAGUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGGU .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AAVX01053845.1/1717-1792 GCCUGGAACACAUACUUCUUUAUAUACCCAUAUGAACUUAACAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU .......(.(..........(..((.((.(...(.(.....)..))..)).))..)..........).)....... >AAPE02049319.1/6122-6197 GCCUGGGAGACAUACUUCUUUAUAUGCCCAUAUGACCUGGGAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..((.((.(...(.(.....)..))..)).))..)........).)......... >AC103987.5/56357-56281 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AAPN01163915.1/14813-14737 GCUUGAGGAACAUACUUCUUUAUAUCCCCAUAUGAACCUGGCAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..((.((.(...(.(......)..))..)).))..)........).)......... >AAPN01261137.1/2838-2913 UCCGAGACAACAUGCUUCUUUAUAUCCCCAUAUGGAUUACGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ......(.(...........(..((.((.(...(.(.....)..))..)).))..)...........).)...... >AAHX01093471.1/12884-12808 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUGGGU .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AL449263.6/21373-21297 GCUUGGGAAACAUACUUCUUUAUAUGCCCAUAUGGACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC .........(.(........(..((.((.(...((.......)..))..)).))..)........).)......... >CR589876.7/166160-166084 GCUUGGUAGACAUACUUCUUUAUAUGCCCAUAUGAACAAGAGCAGCUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU .........(.(........(..((.((.(...((.......)..))..)).))..)........).)......... >AAFR03002451.1/41335-41260 UCUGAGGCAACAUGCUUCUUUAUAUCCCCAUAUGAAUUAUGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ......(.(...........(..((.((.(...(.(.....)..))..)).))..)...........).)...... >AADN03007856.1/168402-168478 GCUUGAGAGACAUACUUCUUUAUAUGCCCAUAUGAACCUGGCAAUCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU .........(.(........(..((.((.(...(.(......)..))..)).))..)........).)......... >AANU01221577.1/6692-6768 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAGGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGUA .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AAWZ02009612.1/57865-57941 GUUGAGAGCACAUACUUCUUUAUGUACCCAUAUGAAGAUACAAUGUUAUGGAAUGUAAAGAAGUAUGUAUUUUUGAU .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >BAAF04038301.1/61-138 CCCUGGGGUACAUACUUCUUUAUGUACCCAUAUGAAGAUAUGAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUCGGU .......(.(..........(..((.((.(...(.(.......)..))..)).))..)..........).).......

>DQ066650.1/1-72 UCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUG .........................(.(................)..)........................ ..................(..(...(.(................)..)...)..)................. .....(.(..........(..(...(.(................)..)...)..)..........).).... .....(.(..........(..((.((.(................)..)).))..)..........).).... .....(.(..........(..((.((.(.....(......)...)..)).))..)..........).).... .....(.(..........(..((.((.(...(.(......)..))..)).))..)..........).).... >AC103987.5/56357-56281 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .......(.(..........(..(...(.(................)..)...)..)..........).)....... .......(.(..........(..((.((.(................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AC140316.3/155249-155325 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUUCAGUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGGU ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .......(.(..........(..(...(.(................)..)...)..)..........).)....... .......(.(..........(..((.((.(................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AAPN01163915.1/14813-14737 GCUUGAGGAACAUACUUCUUUAUAUCCCCAUAUGAACCUGGCAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .........(.(........(..(...(.(................)..)...)..)........).)......... .........(.(........(..((.((.(................)..)).))..)........).)......... .........(.(........(..((.((.(.....(......)...)..)).))..)........).)......... .........(.(........(..((.((.(...(.(......)..))..)).))..)........).)......... >AAHX01093471.1/12884-12808 ACUCAGAGCACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUGUGUAUUUUGGGU ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .......(.(..........(..(...(.(................)..)...)..)..........).)....... .......(.(..........(..((.((.(................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >CR589876.7/166160-166084 GCUUGGUAGACAUACUUCUUUAUAUGCCCAUAUGAACAAGAGCAGCUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .........(.(........(..(...(.(................)..)...)..)........).)......... .........(.(........(..((.((.(................)..)).))..)........).)......... .........(.(........(..((.((.(....(.......)...)..)).))..)........).)......... .........(.(........(..((.((.(...((.......)..))..)).))..)........).)......... >AALT01502699.1/11495-11572 ACUCAAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAGAAUGCUAUGGAAUGUAAAGAAGUAUGUACUUUUGGU ............................(.(................)..)........................... .....................(..(...(.(................)..)...)..).................... ........(.(..........(..(...(.(................)..)...)..)..........).)....... ........(.(..........(..((.((.(................)..)).))..)..........).)....... ........(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... ........(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AL449263.6/21373-21297 GCUUGGGAAACAUACUUCUUUAUAUGCCCAUAUGGACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .........(.(........(..(...(.(................)..)...)..)........).)......... .........(.(........(..((.((.(................)..)).))..)........).)......... .........(.(........(..((.((.(....(.......)...)..)).))..)........).)......... .........(.(........(..((.((.(...((.......)..))..)).))..)........).)......... >DQ066652.1/2-78 CUUUAGGGCACAUACUUCUUUAUAUGCCCAUACUGAAUGAAAAUGCUAUGGAAUGUUAAGAAGUAUGUAACCUAAGG ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .......(.(..........(..(...(.(................)..)...)..)..........).)....... .......(.(..........(..((.((.(................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(....((......)..))..)).))..)..........).)....... >AAFR03005394.1/95017-95093 GCUUGAGAAACAUACUACUUUAUAUGCCCAUAUGAACGUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCCGGU ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .........(.(........(..(...(.(................)..)...)..)........).)......... .........(.(........(..((.((.(................)..)).))..)........).)......... .........(.(........(..((.((.(....(.......)...)..)).))..)........).)......... .........(.(........(..((.((.(...((.......)..))..)).))..)........).)......... >AANU01221577.1/6692-6768 ACUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAGGCUAUGGAAUGUAAAGAAGUAUGUAUUUUGGUA ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .......(.(..........(..(...(.(................)..)...)..)..........).)....... .......(.(..........(..((.((.(................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .........................(.(................)..)......................... ..................(..(...(.(................)..)...)..).................. .....(.(..........(..(...(.(................)..)...)..)..........).)..... .....(.(..........(..((.((.(................)..)).))..)..........).)..... .....(.(..........(..((.((.(.....(......)...)..)).))..)..........).)..... .....(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)..... >AAPN01089888.1/1993-2069 GCUCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUAAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGC ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .......(.(..........(..(...(.(................)..)...)..)..........).)....... .......(.(..........(..((.((.(................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AAVX01149879.1/956-880 ACCUGAAACACAUACUUCUUUAUAUGCCCAUAUGAACCUCACAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCUGGU ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .......(.(..........(..(...(.(................)..)...)..)..........).)....... .......(.(..........(..((.((.(................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AC147912.2/160163-160239 GUUUGGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUAUC ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .......(.(..........(..(...(.(................)..)...)..)..........).)....... .......(.(..........(..((.((.(................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >BAAF04038301.1/61-138 CCCUGGGGUACAUACUUCUUUAUGUACCCAUAUGAAGAUAUGAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUCGGU ...........................(.(.................)..)........................... ....................(..(...(.(.................)..)...)..).................... .......(.(..........(..(...(.(.................)..)...)..)..........).)....... .......(.(..........(..((.((.(.................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(.......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...(.(.......)..))..)).))..)..........).)....... >AAFR03002451.1/41335-41260 UCUGAGGCAACAUGCUUCUUUAUAUCCCCAUAUGAAUUAUGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ...........................((................)..)........................... ....................(..(...((................)..)...)..).................... ......(.(...........(..(...(.(...............)..)...)..)...........).)...... ......(.(...........(..((.((.(...............)..)).))..)...........).)...... ......(.(...........(..((.((.(.....(.....)...)..)).))..)...........).)...... ......(.(...........(..((.((.(...(.(.....)..))..)).))..)...........).)...... >AAPN01261137.1/2838-2913 UCCGAGACAACAUGCUUCUUUAUAUCCCCAUAUGGAUUACGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGG ...........................((................)..)........................... ....................(..(...(.(...............)..)...)..).................... ......(.(...........(..(...(.(...............)..)...)..)...........).)...... ......(.(...........(..((.((.(...............)..)).))..)...........).)...... ......(.(...........(..((.((.(.....(.....)...)..)).))..)...........).)...... ......(.(...........(..((.((.(...(.(.....)..))..)).))..)...........).)...... >BAAF04064761.1/1030-1106 GCUUGGGGGACAUACUUCUUUAUAUGCCCAUAUGAACACGAGCAACUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGU ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .........(.(........(..(...(.(................)..)...)..)........).)......... .........(.(........(..((.((.(................)..)).))..)........).)......... .........(.(........(..((.((.(.....(......)...)..)).))..)........).)......... .........(.(........(..((.((.(...(.(......)..))..)).))..)........).)......... >AADN03007856.1/168402-168478 GCUUGAGAGACAUACUUCUUUAUAUGCCCAUAUGAACCUGGCAAUCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .........(.(........(..(...(.(................)..)...)..)........).)......... .........(.(........(..((.((.(................)..)).))..)........).)......... .........(.(........(..((.((.(.....(......)...)..)).))..)........).)......... .........(.(........(..((.((.(...(.(......)..))..)).))..)........).)......... >AAPE02049319.1/6122-6197 GCCUGGGAGACAUACUUCUUUAUAUGCCCAUAUGACCUGGGAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGU ...........................((................)..)........................... ....................(..(...((................)..)...)..).................... .........(.(........(..(...(.(...............)..)...)..)........).)......... .........(.(........(..((.((.(...............)..)).))..)........).)......... .........(.(........(..((.((.(.....(.....)...)..)).))..)........).)......... .........(.(........(..((.((.(...(.(.....)..))..)).))..)........).)......... >AAWZ02009612.1/57865-57941 GUUGAGAGCACAUACUUCUUUAUGUACCCAUAUGAAGAUACAAUGUUAUGGAAUGUAAAGAAGUAUGUAUUUUUGAU ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .......(.(..........(..(...(.(................)..)...)..)..........).)....... .......(.(..........(..((.((.(................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...(.(......)..))..)).))..)..........).)....... >AL672157.5/42188-42264 GCUUGGGACACAUACUUCUUUAUAUGCCCAUAUGAACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .......(.(..........(..(...(.(................)..)...)..)..........).)....... .......(.(..........(..((.((.(................)..)).))..)..........).)....... .......(.(..........(..((.((.(....(.......)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...((.......)..))..)).))..)..........).)....... >AAVX01053845.1/1717-1792 GCCUGGAACACAUACUUCUUUAUAUACCCAUAUGAACUUAACAGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGU ...........................((................)..)........................... ....................(..(...(.(...............)..)...)..).................... .......(.(..........(..(...(.(...............)..)...)..)..........).)....... .......(.(..........(..((.((.(...............)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(.....)...)..)).))..)..........).)....... .......(.(..........(..((.((.(...(.(.....)..))..)).))..)..........).)....... >AAHY01004442.1/497-572 CCCCAGGCCACAUGCUUCUUUAUAUCCUCAUAGAUAUCUCAGCACUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC ..........................(..(...............)..)........................... ....................(..(..(..(...............)..)...)..).................... .......(.(..........(..(..(..(...............)..)...)..)..........).)....... .......(.(..........(..((((..(...............)..)).))..)..........).)....... .......(.(..........(..((((..(.....(.....)...)..)).))..)..........).)....... >AANH01005371.1/151669-151592 CCUUGGUGCACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAGCUAUGGAAUGUAAAGAAGUAUGUAUUCCUGGU ...........................(..(................)..)........................... ....................(..(...(.(.................)..)...)..).................... .......(.(..........(..(...(.(.................)..)...)..)..........).)....... .......(.(..........(..((.((.(.................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(.......)...)..)).))..)..........).)....... >AAPN01136163.1/2517-2440 CCCCGGGCCACACACUUCUUCAUAUGCCCAUAGGGAGCUGCCCGAACUAUGGAAUGUUAAGAAGUGUGUGUUCUUGGG ...........................(.(.................)..)........................... ....................(..(...(.(.................)..)...)..).................... .......(.(..........(..(...(.(.................)..)...)..)..........).)....... .......(.(..........(..((.((.(.................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(........)..)..)).))..)..........).)....... >AALT01102453.1/1268-1343 GCCAAGAUGACAUGCUUCUUUAUAUCCCCAUACGGAUCUCUUGGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGGC ...........................((................)..)........................... ....................(..(...((................)..)...)..).................... ......(.(...........(..(...(.(...............)..)...)..)...........).)...... ......(.(...........(..((.((.(...............)..)).))..)...........).)...... ......(.(...........(..((.((.(.....(.......).)..)).))..)...........).)...... >AL929326.9/101067-101144 ACUUGGUGUACAUACUUCUUUAUGUGCCCAUAUGAACAUAUAAAAGCUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU ...........................(..(................)..)........................... ....................(..(...(..(................)..)...)..).................... .......(.(..........(..(...(..(................)..)...)..)..........).)....... .......(.(..........(..((.((..(................)..)).))..)..........).)....... .......(.(..........(..((.((..(.....(......)...)..)).))..)..........).)....... >CAAE01015003.1/757237-757162 CUUGUAAGGACAUGCUUCCUUAUAUCCCCAUAUUAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUUACGAG ...........................((................)..)........................... ....................(..(...((................)..)...)..).................... .........(.(........(..(...(.(...............)..)...)..)........).)......... .........(.(........(..((.((.(...............)..)).))..)........).)......... .........(.(........(..((.((.(....(......)...)..)).))..)........).)......... >BX276101.6/115878-115803 CUUGUGAAGACAUGCUUCCUUAUAUGCCCAUAUUAAUGCUCAAGUUAUGGAAUGUAAGGAAGUGUGUGGUUUCAGG ...........................((................)..)........................... ....................(..(...((................)..)...)..).................... .........(.(........(..(...((................)..)...)..)........).)......... .........(.(........(..((.(((................)..)).))..)........).)......... .........(.(........(..((.(((.....(.......)..)..)).))..)........).)......... >AAGV020639359.1/176-251 CCCCGGGAGACAUACUUCUUUAUAUGCCCAUAUGGAGCUCGGAGCUAUGGAAUGUAAAGAAGUAUGUAUCUCAGGC ...........................((................)..)........................... ....................(..(...((................)..)...)..).................... .........(.(........(..(...((................)..)...)..)........).)......... .........(.(........(..((.(((................)..)).))..)........).)......... .........(.(........(..((.(((.....(......)...)..)).))..)........).)......... >AANH01006842.1/36647-36722 CUCGCGAGGACAUGCUUCCUUAUAUCCCCAUAUCAAUACACCACUUAUGGAAUGUAAGGAAGUGUGUGGUCUCAAG ...........................((................)..)........................... ....................(..(...((................)..)...)..).................... .........(.(........(..(...((................)..)...)..)........).)......... .........(.(........(..((.(((................)..)).))..)........).)......... .........(.(........(..((.(((.....(......)...)..)).))..)........).)......... >CAAK05040482.1/7048-7123 AUUGAGACGACAUACUUCCUUAUAUCCCCAUAUUCAGAAUUAAUCUAUGGAAUGUAAGGAAGUGUGUGGCUUCAGU ...........................((................)..)........................... ....................(..(...((................)..)...)..).................... ......(.(...........(..(...((................)..)...)..)...........).)...... ......(.(...........(..((.(((................)..)).))..)...........).)...... ......(.(...........(..((.(((......(.......).)..)).))..)...........).)...... >CAAE01014981.1/12786-12709 CCUUAGUGUACAUACUUCUUUAUGUACCCAUAUGAACAUAUGAUAACUAUGGAAUGUAAAGAAGUAUGUAUUCUUGGU ...........................(..(................)..)........................... ....................(..(...(.(.................)..)...)..).................... .......(.(..........(..(...(.(.................)..)...)..)..........).)....... .......(.(..........(..((.((.(.................)..)).))..)..........).)....... .......(.(..........(..((.((.(.....(.......)...)..)).))..)..........).)....... >AL391221.15/79486-79562 UCCCGAGGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC ............................((................)..)........................... .....................(..(...(.(...............)..)...)..).................... ........(.(..........(..(...(.(...............)..)...)..)..........).)....... ........(.(..........(..((.((.(...............)..)).))..)..........).)....... >DQ520618.1/109-184 CCCAAGGCCACAUGCUUCUUUAUAUCCCCAUACGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCGGC ...........................((................)..)........................... ....................(..(...((................)..)...)..).................... .......(.(..........(..(...(.(...............)..)...)..)..........).)....... .......(.(..........(..((.((.(...............)..)).))..)..........).)....... >AANN01270542.1/4439-4364 CCCAAAGCCACAUGCUUCUUUAUAUCCCCAUAUGGAUUACUUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUUGUC ...........................((................)..)........................... ....................(..(...(.(...............)..)...)..).................... .......(.(..........(..(...(.(...............)..)...)..)..........).)....... .......(.(..........(..((.((.(...............)..)).))..)..........).)....... >AAVX01164741.1/393-468 UCCAAAACUGCAUACUUCUUCAUAUGCCCAUAUGAAAUGCUUUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUGGG ...........................((................)..)........................... ....................(..(...((................)..)...)..).................... .......(.(..........(..(...((................)..)...)..)..........).)....... .......(.(..........(..((.(((................)..)).))..)..........).)....... >AAYZ01364871.1/459-535 GCUUGGGAGACAUACUUCUUUAUACGCCCAUAUGGACUUGCUGCACUAUGGAAUGUAAAGAAGUAUGUACCCCAGGC ...........................(.(................)..)........................... ....................(..(...(.(................)..)...)..).................... .........(.(........(..(...(...(..............)..)...)..)........).)......... >AADN03008235.1/118591-118669 CCCAACCCUACAUACUUCUUCAUAUGCCCAUAUGGAGUCGGCCGGCGUUAUGGAAUGUUAAGAAGUAUGUAUCCUCGGG ...........................(...(................)..)........................... ....................(..(...(.(..................)..)...)..).................... .......(.(..........(..(...(.(..................)..)...)..)..........).)....... >AAGD02012398.1/27745-27823 UGCCGAGCUGCAUACUUCCUUACAUGCCCAUACUAUAUCAGUAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGUU ...........................(...(................)..)........................... ......................(..(.(.(..................)..).)..)...................... >AANG01241232.1/1165-1238 GCUUGGGAAACAUACUUCUUUAUAUGCCCAUAUGGACCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC ...........................((..............)..)........................... ....................(..(...((..............)..)...)..).................... >AAAB01008964.1/1830748-1830826 GCGAAAGUUCCAUGCUUCCUUGCAUUCAAUAGUAUGUUUGUAAAACCCUAUGGAAUGUAAAGAAGUAUGGAGCGAUUGG ...........................(..(.................)..)........................... ......................(..(.(..(.................)..).)..)...................... >AAZO01007144.1/49277-49350 UUACUAGGUCCGUGCUUCCUUACUUCCCAUAUAGUGUUUGUUUUAUGGAAUGUAAAGAAGUAUGGAGCCUGUAC ..........................((...............)..)........................... ..........(...(...........((...............)..)............)...).......... >AAWZ02017015.1/31896-31821 UUUGAGAUUACAUGCUUCUUUAUAUCUCCAUAUGAAUUGCCUUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCAAG ............................((...............)..)........................... ....................(...(...((...............)..)...)..).................... >ABEG02003477.1/15436-15515 UGCCGAGCUGCAUGCUUCUUCUACAUGCCCAUACUAUAUCGUAAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGAA ............................(...(................)..)........................... .......................(...((.(..................)..).)..)...................... >AAWZ02024324.1/1768-1847 UCUUGAGCCUACAUACUUCUUCAUAUGCCCAUAUGGAGUCGGCCAGAUUUAUGGAAUGUUAAGAAGUAUGUAUCGUUGGG ............................(...(................)..)........................... .....................(..(...(.(..................)..)...)..).................... >AAGE02025061.1/66260-66336 UCGAAAGUUCCAUGCUUCCUUGCAUUCAAUAGUGAUUCUGAAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGCUCGG ...........................(.(................)..)........................... ......................(..(.(...(..............)..).)..)...................... >AEKZ01016876.1/452-379 GAUGCUGUUCCGUGCUUCCUUACUUCCCAUAGUGGAUGCGACGUAUGGAAUGUAAAGAAGUAUGGAGCUGCGCC ..........................((...............)..)........................... ..........(...(...........((...............)..)............)...).......... >FO081495.1/23097-23019 UACCGAGCUGCAUACUUCCUUACAUGCCCAUACUAUAUCAUAAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGGG ...........................(...(................)..)........................... ......................(...((.(..................)..).)..)...................... >AADN03003607.1/193091-193166 UAUGAGAUGACAUGCUUCUUUAUAUCCCCAUAUGGAUUAGGCUGCUAUGGAAUGUAAGGAAGUGUGUGGUUUCAGG ...........................((................)..)........................... ....................(..(...(...(.............)..)...)..).................... >AC087074.1/69936-70014 UGCCGAGCUGCAUACUUCCUUACAUGCCCAUACUGUACUGUGAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGAA ...........................(...(................)..)........................... ......................(..(.(.(..................)..).)..)...................... >BAAB01105211.1/2094-2168 GCGCAAGUUCCGUGCUUCCUUACUUCCCAUAGUCAUUGUAAUCAUAUGGAAUGUAAAGAAGUAUGGAGCUGCGCG ..........................(.(...............)..)........................... >AAKO01002808.1/45325-45400 UUGAGAGUUCCAUGCUUCCUUGCAUUCAAUAGUUAUACUCAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUC ...........................(..(..............)..)........................... >AAFS01000978.1/39458-39534 UUGAGAGUUCCAUGCUUCCUUGCAUUCAAUAGUAUAACAUAAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUC ...........................((.................)..)........................... >AAJJ01000046.1/50771-50844 UCGCGAGUUCCGUGCUUCCUUACUUCCCAUAGUGCUUUAAACGUAUGGAAUGUAAAGAAGUAUGGAGCGAACGC ..........................(.(..............)..)........................... >AANI01016241.1/6126-6050 UUGAGAGUUCCAUGCUUCCUUACAUUCAAUAGUAUUCAAAUAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUC ...........................((.................)..)........................... >AAQB01006401.1/151186-151263 UUGAGAGUUCCAUGCUUCCUUGCAUUCAAUAGUAUAUUAAAUAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUC ...........................(.(.................)..)........................... >AAZX01000650.1/30055-30128 GCGUCUGUUCCGUGCUUCCUUACUUCCCAUAGUGCACGUGACGUAUGGAAUGUAAAGAAGUAUGGAGCCGCGCU ..........................((...............)..)........................... >AAWU01006939.1/25735-25811 GCGAAAGUUCCAUGCUUCCUUGCAUUCAAUAGUGAUCUUUGAAACGUAUGGAAUGUAAAGAAGUAUGGAGCGCUCGG ...........................(.(................)..)........................... >AAPT01020974.1/21428-21504 UUGAGAGUUCCAUGCUUCCUUGCAUUCAAUAGUAUAUAAAUAAGCAUAUGGAAUGUAAAGAAGUAUGGAGCGAAAUC ...........................(.(................)..)...........................

	ORB			p-value	ORB frequency (per structure per nucleotide)	Means ratio
1	((U)AU)G			< 0.001		23.4

DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .........1.........2.........3.........4.........5.........6.........7... 1234567890123456789012345678901234567890123456789012345678901234567890123
2	(.RU.().RY.)			< 0.001		8.59

DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .........1.........2.........3.........4.........5.........6.........7... 1234567890123456789012345678901234567890123456789012345678901234567890123
3	((G)A)A			< 0.001		4.46

DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .........1.........2.........3.........4.........5.........6.........7... 1234567890123456789012345678901234567890123456789012345678901234567890123
4	(Y()N)			< 0.001		2.75

DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .........1.........2.........3.........4.........5.........6.........7... 1234567890123456789012345678901234567890123456789012345678901234567890123
5	(.UAY.())			< 0.001		4.72

DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .........1.........2.........3.........4.........5.........6.........7... 1234567890123456789012345678901234567890123456789012345678901234567890123
6	(.NYNNR.)			< 0.001		2.72

DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .........1.........2.........3.........4.........5.........6.........7... 1234567890123456789012345678901234567890123456789012345678901234567890123
	ORB			p-value	ORB frequency (per structure per nucleotide)	Means ratio

	NCM			p-value	NCM frequency (per structure per nucleotide)	Means ratio
1	((U)AU)G			< 0.001		23.4

DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .........1.........2.........3.........4.........5.........6.........7... 1234567890123456789012345678901234567890123456789012345678901234567890123
2	C(C(A))			< 0.001		17.7

DQ066649.1/1-73 UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG UCAGAGUACAUACUUCUUUAUGUACCCAUAUGAACAUACAAUGCUAUGGAAUGUAAAGAAGUAUGUAUUUUUG .........1.........2.........3.........4.........5.........6.........7... 1234567890123456789012345678901234567890123456789012345678901234567890123
3	A(GA(R))			0.608		5.42
	NCM			p-value	NCM frequency (per structure per nucleotide)	Means ratio

Structure is visualized using R2R 1.0.6 (Zasha Weinberg).
LOGOS are generated with ggseqlogo (Omar Wagih).